Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra09G0078100 Salix brachista HOM05D006253 ORTHO05D007666 1.6e-46 189.1 96 100.0
Potri.004G141400 Populus trichocarpa HOM05D006253 ORTHO05D007666 9.5e-28 126.7 86 81.4
Sabra04G0093200 Salix brachista HOM05D006253 ORTHO05D007666 6.2e-27 124.0 86 81.4
CiPaw.05G006400 Carya illinoinensis HOM05D006253 ORTHO05D007666 5.8e-25 117.5 86 77.9
Glyma.04G194000 Glycine max HOM05D006253 ORTHO05D007666 7.5e-25 117.1 86 76.7
VMungo1080G0444 Vigna mungo HOM05D006253 ORTHO05D007666 9.8e-25 116.7 86 76.7
Thecc.02G100600 Theobroma cacao HOM05D006253 ORTHO05D007666 2.2e-24 115.5 86 73.3
TAR376G0695 Trochodendron aralioides HOM05D006253 ORTHO05D007666 2.2e-24 115.5 86 75.6
arahy.Tifrunner.gnm1.ann1.1E2X9I Arachis hypogaea HOM05D006253 ORTHO05D007666 2.9e-24 115.2 86 73.3
Duzib052G0633 Durio zibethinus HOM05D006253 ORTHO05D007666 2.9e-24 115.2 86 73.3
arahy.Tifrunner.gnm1.ann1.ETD7FQ Arachis hypogaea HOM05D006253 ORTHO05D007666 3.7e-24 114.8 86 73.3
Gohir.A01G006900 Gossypium hirsutum HOM05D006253 ORTHO05D007666 6.4e-24 114.0 86 73.3
Manes.01G064000 Manihot esculenta HOM05D006253 ORTHO05D007666 6.4e-24 114.0 86 74.4
Gohir.D01G007000 Gossypium hirsutum HOM05D006253 ORTHO05D007666 1.1e-23 113.2 86 73.3
Gorai.002G008000 Gossypium raimondii HOM05D006253 ORTHO05D007666 1.1e-23 113.2 86 73.3
Lj6g0019810 Lotus japonicus HOM05D006253 ORTHO05D007666 1.1e-23 113.2 86 73.3
TPR.G19494 Trifolium pratense HOM05D006253 ORTHO05D007666 1.4e-23 112.8 85 71.8
arahy.Tifrunner.gnm1.ann1.5N1458 Arachis hypogaea HOM05D006253 ORTHO05D007666 2.4e-23 112.1 86 70.9
Psat5g098280 Pisum sativum HOM05D006253 ORTHO05D007666 2.4e-23 112.1 86 72.1
Ca_15796_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.2e-23 111.7 86 73.3
Ca_30406_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.2e-23 111.7 86 73.3
Hma1.2p1_0370F.1_g137800 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.2e-23 111.7 86 74.4
Eucgr.I01155 Eucalyptus grandis HOM05D006253 ORTHO05D007666 4.1e-23 111.3 86 73.3
Nn5g30328 Nelumbo nucifera HOM05D006253 ORTHO05D007666 4.1e-23 111.3 86 73.3
TPR.G19178 Trifolium pratense HOM05D006253 ORTHO05D007666 4.1e-23 111.3 86 70.9
Ciclev10029390m.g Citrus clementina HOM05D006253 ORTHO05D007666 5.4e-23 110.9 86 72.1
Medtr8g099835 Medicago truncatula HOM05D006253 ORTHO05D007666 9.2e-23 110.2 86 72.1
Phvul.002G266500 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 9.2e-23 110.2 86 72.1
Phvul.005G182700 Phaseolus vulgaris HOM05D006253 ORTHO05D007666 9.2e-23 110.2 86 72.1
arahy.Tifrunner.gnm1.ann1.AJN977 Arachis hypogaea HOM05D006253 ORTHO05D007666 2.1e-22 109.0 86 69.8
PGR142G1116 Punica granatum HOM05D006253 ORTHO05D007666 2.1e-22 109.0 86 68.6
Sc14g0002650 Simmondsia chinensis HOM05D006253 ORTHO05D007666 2.7e-22 108.6 86 72.1
QL11p035967 Quercus lobata HOM05D006253 ORTHO05D007666 6.0e-22 107.5 85 72.9
Actinidia12952 Actinidia chinensis HOM05D006253 ORTHO05D007666 1.7e-21 105.9 86 70.9
Ca_01013_v3 Cicer arietinum L. HOM05D006253 ORTHO05D007666 3.0e-21 105.1 86 66.3
GSVIVG01031749001 Vitis vinifera HOM05D006253 ORTHO05D007666 3.9e-21 104.8 86 67.4
Lalb_Chr25g0286231 Lupinus albus HOM05D006253 ORTHO05D007666 6.6e-21 104.0 86 68.6
MBI02_g02992_MAGBIO Magnolia biondii HOM05D006253 ORTHO05D007666 6.6e-21 104.0 86 67.4
Cc02_g18770 Coffea canephora HOM05D006253 ORTHO05D007666 8.6e-21 103.6 86 68.6
COL.COLO4_32658 Corchorus olitorius HOM05D006253 ORTHO05D007666 8.6e-21 103.6 86 67.4
RcHm_v2.0_Chr6g0257111 Rosa chinensis HOM05D006253 ORTHO05D007666 8.6e-21 103.6 88 68.2
THA.LOC104807358 Tarenaya hassleriana HOM05D006253 ORTHO05D007666 1.1e-20 103.2 86 68.6
Oeu010588.1 Olea europaea HOM05D006253 ORTHO05D007666 1.5e-20 102.8 97 63.9
Prupe.8G124200 Prunus persica HOM05D006253 ORTHO05D007666 1.9e-20 102.4 88 68.2
FvH4_2g06110 Fragaria vesca HOM05D006253 ORTHO05D007666 3.3e-20 101.7 88 67.0
FAN24G2487 Fragaria x ananassa HOM05D006253 ORTHO05D007666 3.3e-20 101.7 88 67.0
PSO478G4849 Papaver somniferum HOM05D006253 ORTHO05D007666 3.3e-20 101.7 97 66.0
TWI79G0152 Tripterygium wilfordii HOM05D006253 ORTHO05D007666 3.3e-20 101.7 86 67.4
Lsat_1_v5_gn_5_112681 Lactuca sativa HOM05D006253 ORTHO05D007666 5.6e-20 100.9 86 66.3
Rhsim03G0192100 Rhododendron simsii HOM05D006253 ORTHO05D007666 5.6e-20 100.9 86 66.3
SalBow3G2580 Salvia bowleyana HOM05D006253 ORTHO05D007666 5.6e-20 100.9 87 66.7
Ah.10g034240 Amaranthus hybridus HOM05D006253 ORTHO05D007666 7.3e-20 100.5 87 63.2
Lj5C209T13 Lonicera japonica HOM05D006253 ORTHO05D007666 1.2e-19 99.8 86 61.6
MD05G1080500 Malus domestica HOM05D006253 ORTHO05D007666 1.2e-19 99.8 87 65.5
Sed0021593 Sechium edule HOM05D006253 ORTHO05D007666 1.2e-19 99.8 86 64.0
CANSAT25G0326 Cannabis sativa HOM05D006253 ORTHO05D007666 1.6e-19 99.4 86 67.4
CAN.G1041.15 Capsicum annuum HOM05D006253 ORTHO05D007666 1.6e-19 99.4 86 67.4
CARHR242350 Cardamine hirsuta HOM05D006253 ORTHO05D007666 1.6e-19 99.4 86 67.4
Solyc01g108260.4 Solanum lycopersicum HOM05D006253 ORTHO05D007666 1.6e-19 99.4 86 67.4
Sopen01g050480 Solanum pennellii HOM05D006253 ORTHO05D007666 1.6e-19 99.4 86 67.4
HanXRQChr16g0501301 Helianthus annuus HOM05D006253 ORTHO05D007666 2.1e-19 99.0 86 65.1
FAN27G3246 Fragaria x ananassa HOM05D006253 ORTHO05D007666 2.8e-19 98.6 94 62.8
PSO782G1871 Papaver somniferum HOM05D006253 ORTHO05D007666 3.6e-19 98.2 92 66.3
Sed0027718 Sechium edule HOM05D006253 ORTHO05D007666 3.6e-19 98.2 86 64.0
HPP92_001047 Vanilla planifolia HOM05D006253 ORTHO05D007666 3.6e-19 98.2 86 66.3
BcaNung06978 Brassica carinata HOM05D006253 ORTHO05D007666 4.7e-19 97.8 86 67.4
AL7G16840 Arabidopsis lyrata HOM05D006253 ORTHO05D007666 6.2e-19 97.4 86 67.4
MELO3C019508.2 Cucumis melo HOM05D006253 ORTHO05D007666 6.2e-19 97.4 86 62.8
AT4G34412 Arabidopsis thaliana HOM05D006253 ORTHO05D007666 8.1e-19 97.1 86 66.3
PGSC0003DMG400025894 Solanum tuberosum HOM05D006253 ORTHO05D007666 8.1e-19 97.1 86 66.3
CANSAT35G0887 Cannabis sativa HOM05D006253 ORTHO05D007666 1.4e-18 96.3 86 66.3
Sp7g32200 Schrenkiella parvula HOM05D006253 ORTHO05D007666 2.3e-18 95.5 97 61.9
Carub.0007s0590 Capsella rubella HOM05D006253 ORTHO05D007666 3.1e-18 95.1 86 64.0
HanXRQChr10g0319791 Helianthus annuus HOM05D006253 ORTHO05D007666 3.1e-18 95.1 86 64.0
SGA_v2.0_scaffold22G09667 Striga asiatica HOM05D006253 ORTHO05D007666 5.2e-18 94.4 86 61.6
A01p04020 Brassica napus HOM05D006253 ORTHO05D007666 6.8e-18 94.0 86 65.1
BraA03t15367Z Brassica rapa HOM05D006253 ORTHO05D007666 6.8e-18 94.0 86 65.1
CsaV3_3G018580 Cucumis sativus L. HOM05D006253 ORTHO05D007666 6.8e-18 94.0 86 60.5
Rhsim05G0084000 Rhododendron simsii HOM05D006253 ORTHO05D007666 6.8e-18 94.0 95 58.9
Zm00001eb124670 Zea mays HOM05D006253 ORTHO05D007666 1.2e-17 93.2 86 66.3
C07p60590 Brassica napus HOM05D006253 ORTHO05D007666 1.5e-17 92.8 86 64.0
BolC7t46489H Brassica oleracea HOM05D003825 ORTHO05D004491 1.5e-17 92.8 86 64.0
ECA234G4670 Erigeron canadensis HOM05D006253 ORTHO05D007666 1.5e-17 92.8 86 60.5
vmacro06019 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 1.5e-17 92.8 101 55.4
Thhalv10026394m.g Eutrema salsugineum HOM05D006253 ORTHO05D007666 2.6e-17 92.0 86 61.6
EL10Ac5g11497 Beta vulgaris HOM05D006253 ORTHO05D007666 5.8e-17 90.9 86 61.6
Os01g0142200 Oryza sativa ssp. japonica HOM05D006253 ORTHO05D007666 7.6e-17 90.5 86 64.0
Aa31LG2G16330 Aethionema arabicum HOM05D006253 ORTHO05D007666 6.4e-16 87.4 97 57.7
MSTRG.27724 Avicennia marina HOM05D006253 ORTHO05D007666 6.4e-16 87.4 86 59.3
Hma1.2p1_0804F.1_g221060 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 4.1e-15 84.7 71 67.6
Glyma.06G172100 Glycine max HOM05D006253 ORTHO05D007666 7.1e-15 84.0 58 75.9
Medtr2g105210 Medicago truncatula HOM05D006253 ORTHO05D007666 7.1e-15 84.0 78 66.7
DCAR_007862 Daucus carota HOM05D006253 ORTHO05D007666 9.2e-15 83.6 97 52.6
AagrBONN_evm.TU.Sc2ySwM_344.4457 Anthoceros agrestis HOM05D006253 ORTHO05D007666 1.0e-13 80.1 86 51.2
Mapoly0083s0082 Marchantia polymorpha HOM05D006253 ORTHO05D007666 1.7e-13 79.3 97 50.5
Atru.chr5.2705 Acer truncatum HOM05D006253 ORTHO05D007666 8.6e-13 77.0 60 71.7
Prupe.6G016400 Prunus persica HOM05D006253 ORTHO05D007666 4.3e-12 74.7 82 53.7
Prupe.4G258000 Prunus persica HOM05D006253 ORTHO05D007666 9.6e-12 73.6 76 56.6
SMO351G0094 Selaginella moellendorffii HOM05D006253 ORTHO05D007666 2.8e-11 72.0 86 51.2
Hma1.2p1_0674F.1_g201500 Hydrangea macrophylla HOM05D006253 ORTHO05D007666 3.6e-11 71.6 58 70.7
Pp3c22_3990 Physcomitrium patens HOM05D006253 ORTHO05D007666 1.4e-10 69.7 86 44.2
Aqoxy5G01240 Aquilegia oxysepala HOM05D006253 ORTHO05D007666 1.8e-10 69.3 63 57.1
CSS0003209 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 5.2e-10 67.8 67 61.2
CDE08G0295 Ceratophyllum demersum HOM05D006253 ORTHO05D007666 6.8e-10 67.4 65 55.4
Hund00335 Selenicereus undatus HOM05D006253 ORTHO05D007666 5.8e-09 64.3 58 62.1
AUR62029937 Chenopodium quinoa HOM05D006253 ORTHO05D007666 7.6e-09 63.9 57 59.6
vmacro19500 Vaccinium macrocarpon HOM05D006253 ORTHO05D007666 9.9e-09 63.5 68 57.4
C01p04340 Brassica napus HOM05D006253 ORTHO05D007666 1.3e-08 63.2 58 65.5
CSS0033941 Camellia sinensis var. sinensis HOM05D006253 ORTHO05D007666 2.2e-08 62.4 97 51.5
Migut.N01188 Erythranthe guttata HOM05D006253 ORTHO05D007666 1.1e-07 60.1 59 57.6
FAN20G2826 Fragaria x ananassa HOM05D006253 ORTHO05D007666 4.2e-07 58.2 83 48.2
CBR_g38557 Chara braunii HOM05D006253 ORTHO05D007666 5.4e-07 57.8 86 41.9
FAN15G3440 Fragaria x ananassa HOM05D006253 ORTHO05D007666 7.1e-07 57.4 47 70.2
AUR62033746 Chenopodium quinoa HOM05D006253 ORTHO05D007666 4.6e-06 54.7 83 48.2


User provided reference genes

Program Settings