Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0176300 Salix brachista HOM05D006278 ORTHO05D007526 2.4e-242 842.0 524 100.0
Potri.005G228400 Populus trichocarpa HOM05D006278 ORTHO05D007526 4.0e-152 542.3 548 73.9
Potri.002G034700 Populus trichocarpa HOM05D006278 ORTHO05D007526 1.1e-125 454.5 533 64.9
Sabra02G0027900 Salix brachista HOM05D006278 ORTHO05D007526 4.0e-96 356.3 575 53.9
Manes.05G158000 Manihot esculenta HOM05D006278 ORTHO05D007526 2.3e-67 260.8 542 51.7
TWI12G1431 Tripterygium wilfordii HOM05D006278 ORTHO05D007526 2.3e-67 260.8 547 45.5
Atru.chr13.448 Acer truncatum HOM05D006278 ORTHO05D007526 5.9e-55 219.5 582 45.5
Duzib093G1165 Durio zibethinus HOM05D006278 ORTHO05D007526 1.6e-52 211.5 546 44.9
Thecc.08G029100 Theobroma cacao HOM05D006278 ORTHO05D007526 3.0e-51 207.2 540 39.3
Ciclev10000483m.g Citrus clementina HOM05D006278 ORTHO05D007526 3.3e-50 203.8 647 39.9
COL.COLO4_26292 Corchorus olitorius HOM05D006278 ORTHO05D007526 2.2e-49 201.1 541 40.3
CiPaw.04G062900 Carya illinoinensis HOM05D006278 ORTHO05D007526 6.3e-49 199.5 567 39.5
CiPaw.03G096900 Carya illinoinensis HOM05D006278 ORTHO05D007526 2.4e-48 197.6 626 32.6
Gohir.D06G004900 Gossypium hirsutum HOM05D006278 ORTHO05D007526 2.4e-48 197.6 535 36.3
Gorai.010G009500 Gossypium raimondii HOM05D006278 ORTHO05D007526 2.4e-48 197.6 535 36.3
Gohir.A06G009400 Gossypium hirsutum HOM05D006278 ORTHO05D007526 3.2e-45 187.2 535 36.6
Rhsim06G0031900 Rhododendron simsii HOM05D006278 ORTHO05D007526 6.7e-43 179.5 414 36.2
Haze_13828 Corylus avellana HOM05D006278 ORTHO05D007526 1.7e-41 174.9 685 34.3
Dinv36098 Davidia involucrata HOM05D006278 ORTHO05D007526 4.8e-41 173.3 363 40.5
Duzib041G0028 Durio zibethinus HOM05D006278 ORTHO05D007526 4.8e-41 173.3 342 39.8
Cfa008229 Carpinus fangiana HOM05D006278 ORTHO05D007526 4.1e-40 170.2 333 41.4
Dinv39433 Davidia involucrata HOM05D006278 ORTHO05D007526 3.5e-39 167.2 285 41.4
Lj4P787T11 Lonicera japonica HOM05D006278 ORTHO05D007526 2.2e-38 164.5 175 50.9
Sc02g0005980 Simmondsia chinensis HOM05D006278 ORTHO05D007526 1.5e-37 161.8 228 41.7
Peaxi162Scf00020g00184 Petunia axillaris HOM05D006278 ORTHO05D007526 2.5e-37 161.0 405 33.3
CSS0025999 Camellia sinensis var. sinensis HOM05D006278 ORTHO05D007526 1.2e-36 158.7 147 56.5
QL12p039628 Quercus lobata HOM05D006278 ORTHO05D007526 1.6e-36 158.3 476 33.0
Oeu029831.2 Olea europaea HOM05D006278 ORTHO05D007526 2.1e-36 157.9 273 38.5
Cpa.g.sc3.303 Carica papaya HOM05D006278 ORTHO05D007526 5.2e-35 153.3 208 41.3
PSO541G0933 Papaver somniferum HOM05D006278 ORTHO05D007526 6.8e-35 152.9 449 32.1
Eucgr.F01578 Eucalyptus grandis HOM05D006278 ORTHO05D007526 8.3e-33 146.0 393 33.6
TAR245G0008 Trochodendron aralioides HOM05D006278 ORTHO05D007526 8.3e-33 146.0 332 34.9
Actinidia15341 Actinidia chinensis HOM05D006278 ORTHO05D007526 1.8e-32 144.8 569 35.1
Oeu049934.1 Olea europaea HOM05D006278 ORTHO05D007526 2.4e-32 144.4 373 31.1
PGSC0003DMG400003686 Solanum tuberosum HOM05D006278 ORTHO05D007526 2.4e-32 144.4 317 33.8
TAR381G0716 Trochodendron aralioides HOM05D006278 ORTHO05D007526 2.4e-32 144.4 332 34.6
PGR004G0534 Punica granatum HOM05D006278 ORTHO05D007526 1.2e-31 142.1 220 44.1
TAR101G0003 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.6e-31 141.7 238 37.0
MSTRG.1269 Avicennia marina HOM05D006278 ORTHO05D007526 2.7e-31 141.0 168 47.0
TAR376G1184 Trochodendron aralioides HOM05D006278 ORTHO05D007526 1.3e-30 138.7 362 33.1
Nitab4.5_0004768g0010 Nicotiana tabacum HOM05D006278 ORTHO05D007526 1.7e-30 138.3 343 33.8
Peaxi162Scf00303g00043 Petunia axillaris HOM05D006278 ORTHO05D007526 1.7e-30 138.3 368 33.4
PSO675G3973 Papaver somniferum HOM05D006278 ORTHO05D007526 2.3e-30 137.9 370 32.4
Nitab4.5_0002224g0110 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.9e-30 137.5 395 30.6
Solyc04g080520.1 Solanum lycopersicum HOM05D006278 ORTHO05D007526 5.0e-30 136.7 374 30.5
Sopen04g034110 Solanum pennellii HOM05D006278 ORTHO05D007526 5.0e-30 136.7 373 31.1
MBI10_g18263_MAGBIO Magnolia biondii HOM05D006278 ORTHO05D007526 1.1e-29 135.6 426 31.2
Aqoxy6G01136 Aquilegia oxysepala HOM05D006278 ORTHO05D007526 1.5e-29 135.2 340 35.0
TAR376G0700 Trochodendron aralioides HOM05D006278 ORTHO05D007526 4.2e-29 133.7 362 33.1
Glyma.17G251400 Glycine max HOM05D006278 ORTHO05D007526 7.2e-29 132.9 208 41.3
DCAR_017552 Daucus carota HOM05D006278 ORTHO05D007526 2.8e-28 131.0 408 32.4
Lalb_Chr24g0398921 Lupinus albus HOM05D006278 ORTHO05D007526 2.8e-28 131.0 167 43.7
CAN.G1226.35 Capsicum annuum HOM05D006278 ORTHO05D007526 4.7e-28 130.2 201 38.3
CANSAT35G1968 Cannabis sativa HOM05D006278 ORTHO05D007526 1.0e-27 129.0 408 31.1
AUR62041670 Chenopodium quinoa HOM05D006278 ORTHO05D007526 6.8e-27 126.3 325 32.6
MD08G1030100 Malus domestica HOM05D006278 ORTHO05D007526 1.5e-26 125.2 542 38.2
Lj5g0016594 Lotus japonicus HOM05D006278 ORTHO05D007526 7.5e-26 122.9 424 30.2
CAN.G424.60 Capsicum annuum HOM05D006278 ORTHO05D007526 9.8e-26 122.5 574 26.8
Nn5g29644 Nelumbo nucifera HOM05D006278 ORTHO05D007526 1.7e-25 121.7 308 33.4
Prupe.1G377800 Prunus persica HOM05D006278 ORTHO05D007526 1.7e-25 121.7 547 29.4
Ah.05g169430 Amaranthus hybridus HOM05D006278 ORTHO05D007526 2.2e-25 121.3 522 28.5
Nitab4.5_0000017g0170 Nicotiana tabacum HOM05D006278 ORTHO05D007526 2.8e-25 120.9 356 31.5
SGA_v2.0_scaffold201G41409 Striga asiatica HOM05D006278 ORTHO05D007526 2.8e-25 120.9 335 31.3
MD15G1025500 Malus domestica HOM05D006278 ORTHO05D007526 6.3e-25 119.8 183 43.2
VMungo0647G1119 Vigna mungo HOM05D006278 ORTHO05D007526 5.4e-24 116.7 335 32.8
AUR62033855 Chenopodium quinoa HOM05D006278 ORTHO05D007526 7.0e-24 116.3 428 28.0
Migut.O00967 Erythranthe guttata HOM05D006278 ORTHO05D007526 1.3e-22 112.1 167 42.5
FAN27G0814 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.9e-22 110.9 218 36.7
FvH4_2g39641 Fragaria vesca HOM05D006278 ORTHO05D007526 3.8e-22 110.5 182 40.1
TPR.G20186 Trifolium pratense HOM05D006278 ORTHO05D007526 6.6e-22 109.8 363 29.5
CANSAT25G3418 Cannabis sativa HOM05D006278 ORTHO05D007526 1.5e-21 108.6 432 31.7
Glyma.14G073601 Glycine max HOM05D006278 ORTHO05D007526 2.5e-21 107.8 591 31.3
FAN20G2275 Fragaria x ananassa HOM05D006278 ORTHO05D007526 4.3e-21 107.1 218 36.2
Sp5g30420 Schrenkiella parvula HOM05D006278 ORTHO05D007526 1.6e-20 105.1 246 35.0
Phvul.001G013600 Phaseolus vulgaris HOM05D006278 ORTHO05D007526 2.8e-20 104.4 590 34.2
ClCG08G014920 Citrullus lanatus HOM05D006278 ORTHO05D007526 3.6e-20 104.0 212 35.4
CARHR068590 Cardamine hirsuta HOM05D006278 ORTHO05D007526 2.3e-19 101.3 132 46.2
BcaNung04385 Brassica carinata HOM05D006278 ORTHO05D007526 3.0e-19 100.9 220 35.9
Medtr1g022365 Medicago truncatula HOM05D006278 ORTHO05D007526 3.0e-19 100.9 345 27.8
Psat6g008120 Pisum sativum HOM05D006278 ORTHO05D007526 6.8e-19 99.8 357 27.7
Ca_13364_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 8.9e-19 99.4 409 29.3
C06p49230 Brassica napus HOM05D006278 ORTHO05D007526 2.0e-18 98.2 168 37.5
A07p40840 Brassica napus HOM05D006278 ORTHO05D007526 4.4e-18 97.1 168 38.1
BraA07t31626Z Brassica rapa HOM05D006278 ORTHO05D007526 5.8e-18 96.7 168 38.1
AL2G35180 Arabidopsis lyrata HOM05D006278 ORTHO05D007526 1.7e-17 95.1 227 32.6
RcHm_v2.0_Chr6g0301251 Rosa chinensis HOM05D006278 ORTHO05D007526 1.7e-17 95.1 183 39.9
BolC6t39956H Brassica oleracea HOM05D006278 ORTHO05D007526 2.2e-17 94.7 222 34.7
Carub.0002s2208 Capsella rubella HOM05D006278 ORTHO05D007526 2.2e-17 94.7 226 33.6
AT1G75260 Arabidopsis thaliana HOM05D006278 ORTHO05D007526 2.9e-17 94.4 167 39.5
BcaC08g47365 Brassica carinata HOM05D006278 ORTHO05D007526 2.9e-17 94.4 220 34.1
PGSC0003DMG400005375 Solanum tuberosum HOM05D006278 ORTHO05D007526 2.9e-17 94.4 414 28.7
Thhalv10018443m.g Eutrema salsugineum HOM05D006278 ORTHO05D007526 3.7e-17 94.0 146 40.4
Gorai.005G108300 Gossypium raimondii HOM05D000342 ORTHO05D000217 6.4e-17 93.2 504 33.3
THA.LOC104809215 Tarenaya hassleriana HOM05D006278 ORTHO05D007526 1.1e-16 92.4 162 37.7
Sed0000803 Sechium edule HOM05D006278 ORTHO05D007526 1.9e-16 91.7 349 27.2
Aa31LG4G5490 Aethionema arabicum HOM05D006278 ORTHO05D007526 3.2e-16 90.9 405 28.4
Gohir.D02G095000 Gossypium hirsutum HOM05D000342 ORTHO05D000217 2.0e-15 88.2 505 33.7
Nn2g14857 Nelumbo nucifera HOM05D006278 ORTHO05D007526 6.0e-15 86.7 353 29.2
Nitab4.5_0003711g0040 Nicotiana tabacum HOM05D006278 ORTHO05D007526 7.8e-15 86.3 115 42.6
DCAR_019537 Daucus carota HOM05D006278 ORTHO05D007526 1.7e-14 85.1 327 28.4
unitig_0.g2047 Utricularia gibba HOM05D006278 ORTHO05D007526 5.0e-14 83.6 107 46.7
CsaV3_2G028850 Cucumis sativus L. HOM05D006278 ORTHO05D007526 6.6e-14 83.2 389 27.2
ECA247G1288 Erigeron canadensis HOM05D006278 ORTHO05D007526 1.9e-13 81.6 128 39.1
CDE04G1483 Ceratophyllum demersum HOM05D003484 ORTHO05D004152 4.3e-13 80.5 338 30.2
CDE06G2487 Ceratophyllum demersum HOM05D006278 ORTHO05D007526 4.3e-13 80.5 151 39.7
ATR0568G158 Amborella trichopoda HOM05D006278 ORTHO05D007526 5.6e-13 80.1 143 35.0
ECA232G2514 Erigeron canadensis HOM05D006278 ORTHO05D007526 8.0e-12 76.3 368 29.1
SEGI_20460 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 8.0e-12 76.3 179 34.1
Lalb_Chr08g0245891 Lupinus albus HOM05D006278 ORTHO05D007526 2.3e-11 74.7 134 39.6
SEGI_39042 Sequoiadendron giganteum HOM05D006278 ORTHO05D007526 3.1e-11 74.3 232 31.5
FAN15G2069 Fragaria x ananassa HOM05D006278 ORTHO05D007526 2.6e-10 71.2 220 30.9
MBI13_g41464_MAGBIO Magnolia biondii HOM05D004242 ORTHO05D004349 3.4e-10 70.9 155 35.5
TPR.G12310 Trifolium pratense HOM05D006278 ORTHO05D007526 5.8e-10 70.1 172 33.1
arahy.Tifrunner.gnm1.ann1.7TI70S Arachis hypogaea HOM05D006278 ORTHO05D007526 7.5e-10 69.7 155 34.8
Ca_15506_v3 Cicer arietinum L. HOM05D006278 ORTHO05D007526 7.5e-10 69.7 136 36.0
arahy.Tifrunner.gnm1.ann1.K7D9EI Arachis hypogaea HOM05D006278 ORTHO05D007526 9.8e-10 69.3 165 34.5
Medtr3g111950 Medicago truncatula HOM05D006278 ORTHO05D007526 2.9e-09 67.8 150 36.7
Gohir.A03G079100 Gossypium hirsutum HOM05D000342 ORTHO05D000217 4.9e-09 67.0 495 30.3
HPP92_004792 Vanilla planifolia HOM05D006278 ORTHO05D007526 8.3e-09 66.2 167 29.9
Lj1g0002957 Lotus japonicus HOM05D006278 ORTHO05D007526 1.4e-08 65.5 229 29.3
DCAR_020977 Daucus carota HOM05D006278 ORTHO05D007526 9.2e-08 62.8 502 31.1
Psat5g012120 Pisum sativum HOM05D006278 ORTHO05D007526 9.2e-08 62.8 110 39.1
Oeu004972.1 Olea europaea HOM05D004242 ORTHO05D004349 4.6e-07 60.5 269 28.3
PGR031G2923 Punica granatum HOM05D004242 ORTHO05D004349 6.0e-07 60.1 107 36.4
ATR0796G195 Amborella trichopoda HOM05D004242 ORTHO05D004349 7.8e-07 59.7 107 36.4
CDE02G1230 Ceratophyllum demersum HOM05D004242 ORTHO05D004349 7.8e-07 59.7 105 41.0
Lsat_1_v5_gn_8_20301 Lactuca sativa HOM05D004242 ORTHO05D004349 1.0e-06 59.3 141 33.3
VMungo1309G1357 Vigna mungo HOM05D006278 ORTHO05D007526 1.0e-06 59.3 328 26.8
ClCG05G000600 Citrullus lanatus HOM05D004242 ORTHO05D004349 3.0e-06 57.8 108 31.5
Lj3g0014324 Lotus japonicus HOM05D004242 ORTHO05D004349 5.1e-06 57.0 154 29.9
Psat3g001320 Pisum sativum HOM05D004242 ORTHO05D004349 5.1e-06 57.0 106 34.9
SEGI_14478 Sequoiadendron giganteum HOM05D004242 ORTHO05D004349 5.1e-06 57.0 118 33.1
Glyma.03G259500 Glycine max HOM05D004242 ORTHO05D004349 6.6e-06 56.6 108 34.3
arahy.Tifrunner.gnm1.ann1.16GZH2 Arachis hypogaea HOM05D004242 ORTHO05D004349 8.6e-06 56.2 105 36.2


User provided reference genes

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