Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0111000 Salix brachista HOM05D000627 ORTHO05D000365 4.0e-83 311.6 184 100.0
Potri.005G139700 Populus trichocarpa HOM05D000627 ORTHO05D000365 4.3e-53 211.8 148 75.7
Manes.12G104100 Manihot esculenta HOM05D000627 ORTHO05D000365 1.2e-15 87.4 141 48.9
CiPaw.01G016500 Carya illinoinensis HOM05D000627 ORTHO05D000365 3.9e-14 82.4 131 51.9
Thecc.01G058800 Theobroma cacao HOM05D000627 ORTHO05D000365 6.7e-14 81.6 123 48.0
QL06p040949 Quercus lobata HOM05D000627 ORTHO05D000365 1.5e-13 80.5 126 50.8
Duzib147G1372 Durio zibethinus HOM05D000627 ORTHO05D000365 1.3e-12 77.4 122 47.5
RcHm_v2.0_Chr2g0105931 Rosa chinensis HOM05D000627 ORTHO05D000365 2.2e-12 76.6 121 45.5
FvH4_1g16230 Fragaria vesca HOM05D000627 ORTHO05D000365 3.1e-11 72.8 121 44.6
FAN28G2570 Fragaria x ananassa HOM05D000627 ORTHO05D000365 7.0e-11 71.6 121 43.8
FAN19G1420 Fragaria x ananassa HOM05D000627 ORTHO05D000365 9.1e-11 71.2 121 43.8
Actinidia16476 Actinidia chinensis HOM05D000627 ORTHO05D000365 1.2e-10 70.9 127 42.5
Prupe.7G131400 Prunus persica HOM05D000627 ORTHO05D000365 2.0e-10 70.1 173 44.5
GSVIVG01022111001 Vitis vinifera HOM05D000627 ORTHO05D000365 2.6e-10 69.7 126 43.7
FAN23G0049 Fragaria x ananassa HOM05D003103 ORTHO05D003999 4.5e-10 68.9 121 44.6
Cfa004034 Carpinus fangiana HOM05D003103 ORTHO05D003999 5.9e-10 68.6 96 51.0
FAN26G2157 Fragaria x ananassa HOM05D000627 ORTHO05D000365 7.7e-10 68.2 121 43.0
Medtr5g017040 Medicago truncatula HOM05D000627 ORTHO05D000365 1.3e-09 67.4 120 49.2
TWI09G1501 Tripterygium wilfordii HOM05D000627 ORTHO05D000365 1.7e-09 67.0 146 41.8
CANSAT01G2532 Cannabis sativa HOM05D000627 ORTHO05D000365 2.9e-09 66.2 131 40.5
Duzib187G0566 Durio zibethinus HOM05D000627 ORTHO05D000365 3.8e-09 65.9 79 57.0
THA.LOC104807589 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 3.8e-09 65.9 143 44.1
VMungo1215G0727 Vigna mungo HOM05D000627 ORTHO05D000365 6.5e-09 65.1 146 39.7
CSS0010903 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 8.5e-09 64.7 135 38.5
CSS0022923 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 8.5e-09 64.7 135 38.5
Phvul.002G017600 Phaseolus vulgaris HOM05D000627 ORTHO05D000365 1.1e-08 64.3 146 39.0
SGA_v2.0_scaffold15G07324 Striga asiatica HOM05D000627 ORTHO05D000365 2.5e-08 63.2 132 41.7
arahy.Tifrunner.gnm1.ann1.N3DKS3 Arachis hypogaea HOM05D000627 ORTHO05D000365 3.2e-08 62.8 136 41.2
arahy.Tifrunner.gnm1.ann1.90DV49 Arachis hypogaea HOM05D000627 ORTHO05D000365 7.2e-08 61.6 138 40.6
MD15G1285600 Malus domestica HOM05D000627 ORTHO05D000365 7.2e-08 61.6 130 40.0
THA.LOC104819849 Tarenaya hassleriana HOM05D000627 ORTHO05D000365 7.2e-08 61.6 138 37.7
Dinv30001 Davidia involucrata HOM05D000627 ORTHO05D000365 1.6e-07 60.5 152 39.5
Gohir.D11G200500 Gossypium hirsutum HOM05D000627 ORTHO05D000365 2.1e-07 60.1 68 61.8
Haze_15379 Corylus avellana HOM05D000627 ORTHO05D000365 2.7e-07 59.7 94 50.0
TPR.G15885 Trifolium pratense HOM05D000627 ORTHO05D000365 2.7e-07 59.7 118 44.9
Lj2g0007139 Lotus japonicus HOM05D000627 ORTHO05D000365 4.7e-07 58.9 122 44.3
MELO3C007570.2 Cucumis melo HOM05D000627 ORTHO05D000365 6.1e-07 58.5 58 53.4
CsaV3_6G043370 Cucumis sativus L. HOM05D000627 ORTHO05D000365 6.1e-07 58.5 58 53.4
Glyma.11G054600 Glycine max HOM05D000627 ORTHO05D000365 6.1e-07 58.5 135 40.7
Hma1.2p1_0909F.1_g235800 Hydrangea macrophylla HOM05D000627 ORTHO05D000365 8.0e-07 58.2 127 43.3
ClCG01G016910 Citrullus lanatus HOM05D000627 ORTHO05D000365 1.0e-06 57.8 58 53.4
Glyma.01G187600 Glycine max HOM05D000627 ORTHO05D000365 1.4e-06 57.4 138 40.6
HanXRQChr09g0263681 Helianthus annuus HOM05D000627 ORTHO05D000365 1.4e-06 57.4 122 41.8
Duzib264G1235 Durio zibethinus HOM05D000627 ORTHO05D000365 1.8e-06 57.0 75 57.3
MD02G1174600 Malus domestica HOM05D000627 ORTHO05D000365 1.8e-06 57.0 159 39.6
CSS0008776 Camellia sinensis var. sinensis HOM05D000627 ORTHO05D000365 2.3e-06 56.6 125 42.4
PGR004G2742 Punica granatum HOM05D000627 ORTHO05D000365 3.0e-06 56.2 75 53.3
Sc03g0001690 Simmondsia chinensis HOM05D000627 ORTHO05D000365 5.2e-06 55.5 145 37.9


User provided reference genes

Program Settings