Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra05G0077900 Salix brachista HOM05D006477 ORTHO05D008311 6.5e-82 307.4 158 100.0
Potri.005G094100 Populus trichocarpa HOM05D006477 ORTHO05D008311 7.0e-36 154.5 82 96.3
Cc02_g26330 Coffea canephora HOM05D006477 ORTHO05D008311 4.7e-32 141.7 88 80.7
Migut.J00830 Erythranthe guttata HOM05D006477 ORTHO05D008311 1.4e-31 140.2 82 84.1
Hma1.2p1_2755F.1_g327960 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 6.8e-31 137.9 82 85.4
Manes.06G016700 Manihot esculenta HOM05D006477 ORTHO05D008311 6.8e-31 137.9 82 85.4
Manes.06G016750 Manihot esculenta HOM05D006477 ORTHO05D008311 6.8e-31 137.9 82 85.4
QL05p056259 Quercus lobata HOM05D006477 ORTHO05D008311 6.8e-31 137.9 85 81.2
FAN03G3069 Fragaria x ananassa HOM05D006477 ORTHO05D029725 8.9e-31 137.5 134 56.0
Rhsim07G0044200 Rhododendron simsii HOM05D006477 ORTHO05D008311 8.9e-31 137.5 82 82.9
Cfa003675 Carpinus fangiana HOM05D006477 ORTHO05D008311 1.2e-30 137.1 82 84.1
QL05p054895 Quercus lobata HOM05D006477 ORTHO05D008311 1.5e-30 136.7 82 82.9
QL05p056339 Quercus lobata HOM05D006477 ORTHO05D008311 1.5e-30 136.7 82 82.9
Rhsim07G0044700 Rhododendron simsii HOM05D006477 ORTHO05D008311 1.5e-30 136.7 82 81.7
Actinidia05816 Actinidia chinensis HOM05D006477 ORTHO05D008311 2.0e-30 136.3 82 82.9
CAN.G700.29 Capsicum annuum HOM05D006477 ORTHO05D008311 2.0e-30 136.3 82 81.7
Hma1.2p1_0915F.1_g236330 Hydrangea macrophylla HOM05D006477 ORTHO05D008311 2.0e-30 136.3 82 84.1
MELO3C020371.2 Cucumis melo HOM05D006477 ORTHO05D008311 3.4e-30 135.6 82 81.7
FvH4_7g07070 Fragaria vesca HOM05D006477 ORTHO05D008311 3.4e-30 135.6 80 83.8
FAN06G1803 Fragaria x ananassa HOM05D006477 ORTHO05D008311 3.4e-30 135.6 80 83.8
TWI59G0878 Tripterygium wilfordii HOM05D006477 ORTHO05D008311 3.4e-30 135.6 82 80.5
Nitab4.5_0004594g0090 Nicotiana tabacum HOM05D006477 ORTHO05D008311 4.4e-30 135.2 88 76.1
Aqoxy7G00962 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 5.7e-30 134.8 109 68.8
Actinidia31748 Actinidia chinensis HOM05D006477 ORTHO05D008311 7.5e-30 134.4 82 81.7
CSS0043287 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.3e-29 133.7 82 80.5
CiPaw.03G039600 Carya illinoinensis HOM05D006477 ORTHO05D008311 1.3e-29 133.7 82 80.5
FAN10G2338 Fragaria x ananassa HOM05D006477 ORTHO05D008311 1.3e-29 133.7 80 82.5
CSS0025225 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 1.7e-29 133.3 82 80.5
Aqoxy7G00965 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.2e-29 132.9 101 70.3
ClCG06G008130 Citrullus lanatus HOM05D006477 ORTHO05D008311 2.9e-29 132.5 82 78.0
SalBow6G6803 Salvia bowleyana HOM05D006477 ORTHO05D008311 3.7e-29 132.1 82 80.5
Haze_15813 Corylus avellana HOM05D006477 ORTHO05D008311 4.9e-29 131.7 82 80.5
Duzib128G0861 Durio zibethinus HOM05D006477 ORTHO05D008311 4.9e-29 131.7 82 80.5
Rhsim07G0124700 Rhododendron simsii HOM05D006477 ORTHO05D008311 4.9e-29 131.7 82 79.3
vmacro13578 Vaccinium macrocarpon HOM05D006477 ORTHO05D008311 4.9e-29 131.7 82 79.3
MBI04_g32195_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 6.4e-29 131.3 82 78.0
Gohir.A12G270700 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.3e-29 131.0 88 75.0
Gohir.D12G271100 Gossypium hirsutum HOM05D006477 ORTHO05D008311 8.3e-29 131.0 88 75.0
Gorai.008G291500 Gossypium raimondii HOM05D006477 ORTHO05D008311 8.3e-29 131.0 88 75.0
SGA_v2.0_scaffold120G32938 Striga asiatica HOM05D006477 ORTHO05D008311 8.3e-29 131.0 82 78.0
Eucgr.E04248 Eucalyptus grandis HOM05D006477 ORTHO05D008311 1.1e-28 130.6 82 79.3
MD07G1076600 Malus domestica HOM05D006477 ORTHO05D008311 1.1e-28 130.6 82 79.3
Lsat_1_v5_gn_4_40501 Lactuca sativa HOM05D006477 ORTHO05D008311 1.4e-28 130.2 82 76.8
Aqoxy5G03392 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 2.4e-28 129.4 101 69.3
RcHm_v2.0_Chr1g0337021 Rosa chinensis HOM05D006477 ORTHO05D008311 2.4e-28 129.4 82 79.3
Prupe.2G097300 Prunus persica HOM05D006477 ORTHO05D008311 3.2e-28 129.0 82 78.0
PGSC0003DMG400001789 Solanum tuberosum HOM05D006477 ORTHO05D008311 4.1e-28 128.6 82 78.0
Thecc.07G155600 Theobroma cacao HOM05D006477 ORTHO05D008311 4.1e-28 128.6 82 79.3
HanXRQChr15g0495711 Helianthus annuus HOM05D006477 ORTHO05D008311 7.0e-28 127.9 82 74.4
HanXRQChr16g0522681 Helianthus annuus HOM05D006477 ORTHO05D008311 7.0e-28 127.9 82 74.4
MD02G1240300 Malus domestica HOM05D006477 ORTHO05D008311 7.0e-28 127.9 82 78.0
Nitab4.5_0004800g0020 Nicotiana tabacum HOM05D006477 ORTHO05D008311 7.0e-28 127.9 88 75.0
Solyc01g081120.2 Solanum lycopersicum HOM05D006477 ORTHO05D008311 7.0e-28 127.9 82 76.8
Sopen01g032730 Solanum pennellii HOM05D006477 ORTHO05D008311 7.0e-28 127.9 82 76.8
AUR62007820 Chenopodium quinoa HOM05D006477 ORTHO05D008311 9.2e-28 127.5 88 72.7
ATR0829G122 Amborella trichopoda HOM05D006477 ORTHO05D008311 1.2e-27 127.1 82 75.6
Aqoxy6G02884 Aquilegia oxysepala HOM05D006477 ORTHO05D008311 1.2e-27 127.1 88 72.7
COL.COLO4_37808 Corchorus olitorius HOM05D006477 ORTHO05D008311 1.2e-27 127.1 88 75.0
Ca_18942_v3 Cicer arietinum L. HOM05D006477 ORTHO05D008311 1.6e-27 126.7 82 76.8
ECA234G3546 Erigeron canadensis HOM05D006477 ORTHO05D008311 2.0e-27 126.3 82 74.4
QL03p061357 Quercus lobata HOM05D006477 ORTHO05D008311 2.7e-27 125.9 82 76.8
arahy.Tifrunner.gnm1.ann1.2E1B03 Arachis hypogaea HOM05D006477 ORTHO05D008311 3.5e-27 125.6 82 76.8
arahy.Tifrunner.gnm1.ann1.B2599V Arachis hypogaea HOM05D006477 ORTHO05D008311 3.5e-27 125.6 82 76.8
COL.COLO4_15215 Corchorus olitorius HOM05D006477 ORTHO05D008311 3.5e-27 125.6 88 73.9
SHI34920 Sapria himalayana HOM05D006477 ORTHO05D008311 3.5e-27 125.6 79 78.5
HPP92_026480 Vanilla planifolia HOM05D006477 ORTHO05D008311 3.5e-27 125.6 82 75.6
GSVIVG01001179001 Vitis vinifera HOM05D006477 ORTHO05D008311 3.5e-27 125.6 81 77.8
Cpa.g.sc53.139 Carica papaya HOM05D006477 ORTHO05D008311 4.6e-27 125.2 82 75.6
Medtr4g078485 Medicago truncatula HOM05D006477 ORTHO05D008311 5.9e-27 124.8 82 76.8
CsaV3_2G011040 Cucumis sativus L. HOM05D006477 ORTHO05D008311 1.0e-26 124.0 74 83.8
MBI04_g32196_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 1.0e-26 124.0 82 73.2
PGR042G2475 Punica granatum HOM05D006477 ORTHO05D008311 1.3e-26 123.6 82 73.2
TPR.G24136 Trifolium pratense HOM05D006477 ORTHO05D008311 1.3e-26 123.6 82 74.4
PSO017G7014 Papaver somniferum HOM05D006477 ORTHO05D008311 2.3e-26 122.9 72 84.7
Lj1g0022259 Lotus japonicus HOM05D006477 ORTHO05D008311 3.9e-26 122.1 82 73.2
EL10Ac6g14607 Beta vulgaris HOM05D006477 ORTHO05D008311 5.0e-26 121.7 82 73.2
ECA234G1029 Erigeron canadensis HOM05D006477 ORTHO05D008311 5.0e-26 121.7 82 72.0
TPR.G19239 Trifolium pratense HOM05D006477 ORTHO05D008311 6.6e-26 121.3 82 72.0
unitig_27.g24761 Utricularia gibba HOM05D006477 ORTHO05D008311 1.5e-25 120.2 82 73.2
HanXRQChr17g0567251 Helianthus annuus HOM05D006477 ORTHO05D008311 4.3e-25 118.6 83 72.3
Lalb_Chr25g0285311 Lupinus albus HOM05D006477 ORTHO05D008311 1.6e-24 116.7 80 71.2
Ciclev10023972m.g Citrus clementina HOM05D006477 ORTHO05D008311 2.8e-24 115.9 86 70.9
Phvul.010G094300 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 3.6e-24 115.5 79 73.4
Phvul.011G119800 Phaseolus vulgaris HOM05D006477 ORTHO05D008311 6.2e-24 114.8 77 72.7
THA.LOC104823802 Tarenaya hassleriana HOM05D006477 ORTHO05D008311 1.4e-23 113.6 80 72.5
SEGI_06535 Sequoiadendron giganteum HOM05D006477 ORTHO05D008311 3.1e-23 112.5 90 62.2
Carub.0002s1025 Capsella rubella HOM05D006477 ORTHO05D008311 2.0e-22 109.8 80 68.8
Glyma.12G115400 Glycine max HOM05D006477 ORTHO05D008311 2.0e-22 109.8 79 69.6
AL2G19670 Arabidopsis lyrata HOM05D006477 ORTHO05D008311 4.4e-22 108.6 80 67.5
AT1G65032 Arabidopsis thaliana HOM05D006477 ORTHO05D008311 4.4e-22 108.6 80 67.5
Glyma.06G291500 Glycine max HOM05D006477 ORTHO05D008311 4.4e-22 108.6 79 68.4
Zm00001eb326860 Zea mays HOM05D006477 ORTHO05D008311 2.9e-21 105.9 84 67.9
Sp5g22520 Schrenkiella parvula HOM05D006477 ORTHO05D008311 3.7e-21 105.5 78 66.7
BcaNung05073 Brassica carinata HOM05D006477 ORTHO05D008311 4.9e-21 105.1 78 65.4
Thhalv10019379m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 4.9e-21 105.1 78 66.7
Atru.chr3.3240 Acer truncatum HOM05D006477 ORTHO05D008311 6.4e-21 104.8 86 65.1
C06p42740 Brassica napus HOM05D006477 ORTHO05D008311 8.3e-21 104.4 78 64.1
C06p42790 Brassica napus HOM05D006477 ORTHO05D008311 8.3e-21 104.4 78 64.1
BolC6t39165H Brassica oleracea HOM05D006477 ORTHO05D008311 8.3e-21 104.4 78 64.1
A07p34050 Brassica napus HOM05D006477 ORTHO05D008311 1.1e-20 104.0 78 64.1
Os02g0695700 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.9e-20 103.2 79 65.8
BraA07t31031Z Brassica rapa HOM05D006477 ORTHO05D008311 3.2e-20 102.4 78 62.8
Zm00001eb251360 Zea mays HOM05D006477 ORTHO05D008311 3.2e-20 102.4 79 64.6
C06p41870 Brassica napus HOM05D006477 ORTHO05D008311 5.4e-20 101.7 78 62.8
BolC6t39243H Brassica oleracea HOM05D006477 ORTHO05D008311 5.4e-20 101.7 78 62.8
DCAR_024347 Daucus carota HOM05D006477 ORTHO05D008311 1.6e-19 100.1 60 83.3
Peaxi162Scf00592g00428 Petunia axillaris HOM05D000001 ORTHO05D000003 1.5e-17 93.6 63 74.6
Os04g0624900 Oryza sativa ssp. japonica HOM05D006477 ORTHO05D008311 1.6e-16 90.1 75 62.7
Pp3c3_2840 Physcomitrium patens HOM05D006477 ORTHO05D008311 2.1e-16 89.7 82 54.9
MBI16_g31701_MAGBIO Magnolia biondii HOM05D006477 ORTHO05D008311 3.6e-16 89.0 60 76.7
Sed0027346 Sechium edule HOM05D006477 ORTHO05D008311 8.1e-16 87.8 58 77.6
Mapoly0009s0212 Marchantia polymorpha HOM05D006477 ORTHO05D008311 1.4e-15 87.0 82 53.7
CSS0008051 Camellia sinensis var. sinensis HOM05D006477 ORTHO05D008311 4.0e-15 85.5 82 56.1
Thhalv10019610m.g Eutrema salsugineum HOM05D006477 ORTHO05D008311 1.2e-14 84.0 64 67.2
Psat7g168960 Pisum sativum HOM05D006477 ORTHO05D008311 9.8e-14 80.9 60 68.3
Psat0s466g0120 Pisum sativum HOM05D006477 ORTHO05D008311 2.9e-13 79.3 60 66.7
SGA_v2.0_scaffold195G40833 Striga asiatica HOM05D006477 ORTHO05D404429 3.7e-13 79.0 70 65.7
BcaB03g15190 Brassica carinata HOM05D006477 ORTHO05D008311 6.4e-13 78.2 54 68.5
BcaC08g46243 Brassica carinata HOM05D006477 ORTHO05D008311 6.4e-13 78.2 78 53.8
arahy.Tifrunner.gnm1.ann1.HM6XW1 Arachis hypogaea HOM05D006477 ORTHO05D008311 2.4e-12 76.3 84 52.4
PSO017G6472 Papaver somniferum HOM05D006477 ORTHO05D008311 7.3e-09 64.7 48 66.7
PSO017G6604 Papaver somniferum HOM05D006477 ORTHO05D008311 7.3e-09 64.7 48 66.7
Sc21g0001600 Simmondsia chinensis HOM05D006477 ORTHO05D008311 7.3e-09 64.7 46 67.4
Rhsim13G0110700 Rhododendron simsii HOM05D006477 ORTHO05D008311 9.5e-09 64.3 40 75.0


User provided reference genes

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