Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sabra01G0123100 Salix brachista HOM05D000549 ORTHO05D006202 2.6e-71 271.9 138 100.0
Potri.001G153300 Populus trichocarpa HOM05D000549 ORTHO05D006202 2.1e-60 235.7 137 89.1
Sabra03G0052200 Salix brachista HOM05D000549 ORTHO05D006202 1.2e-52 209.9 137 80.3
Potri.003G080800 Populus trichocarpa HOM05D000549 ORTHO05D006202 1.4e-51 206.5 137 80.3
Manes.01G085900 Manihot esculenta HOM05D000549 ORTHO05D006202 1.6e-39 166.4 152 61.8
Atru.chr9.1244 Acer truncatum HOM05D000549 ORTHO05D006202 3.4e-34 148.7 148 54.7
TWI23G0592 Tripterygium wilfordii HOM05D000549 ORTHO05D006202 9.8e-34 147.1 150 56.7
CiPaw.12G048500 Carya illinoinensis HOM05D000549 ORTHO05D006202 8.3e-33 144.1 147 55.8
Gorai.008G232200 Gossypium raimondii HOM05D000549 ORTHO05D006202 8.3e-33 144.1 137 58.4
Lj2C226T17 Lonicera japonica HOM05D000549 ORTHO05D006202 8.3e-33 144.1 143 53.8
Gohir.D12G216600 Gossypium hirsutum HOM05D000549 ORTHO05D006202 1.1e-32 143.7 137 57.7
Duzib205G0373 Durio zibethinus HOM05D000549 ORTHO05D006202 1.4e-32 143.3 137 56.9
Nitab4.5_0006805g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 3.1e-32 142.1 143 52.4
PGSC0003DMG400026228 Solanum tuberosum HOM05D000549 ORTHO05D006202 3.1e-32 142.1 137 54.7
Sopen08g026620 Solanum pennellii HOM05D000549 ORTHO05D006202 4.1e-32 141.7 137 54.7
Gohir.A12G214000 Gossypium hirsutum HOM05D000549 ORTHO05D006202 1.2e-31 140.2 137 56.9
TAR375G0271 Trochodendron aralioides HOM05D000549 ORTHO05D006202 1.2e-31 140.2 149 54.4
Nitab4.5_0009301g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 1.6e-31 139.8 143 51.0
QL12p009265 Quercus lobata HOM05D000549 ORTHO05D006202 1.6e-31 139.8 139 56.8
QL12p009692 Quercus lobata HOM05D000549 ORTHO05D006202 1.6e-31 139.8 139 56.8
Solyc08g078130.4 Solanum lycopersicum HOM05D000549 ORTHO05D006202 4.5e-31 138.3 137 54.0
Sed0002501 Sechium edule HOM05D000549 ORTHO05D006202 1.0e-30 137.1 105 66.7
Thecc.03G244600 Theobroma cacao HOM05D000549 ORTHO05D006202 1.0e-30 137.1 138 56.5
Nn6g33826 Nelumbo nucifera HOM05D000549 ORTHO05D006202 1.3e-30 136.7 150 52.7
ClCG10G002420 Citrullus lanatus HOM05D000549 ORTHO05D006202 8.6e-30 134.0 100 69.0
CAN.G1856.5 Capsicum annuum HOM05D000549 ORTHO05D006202 1.1e-29 133.7 135 51.9
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 3.3e-29 132.1 104 65.4
Peaxi162Scf00160g01532 Petunia axillaris HOM05D000549 ORTHO05D006202 3.3e-29 132.1 142 50.7
FvH4_5g19890 Fragaria vesca HOM05D000549 ORTHO05D006202 4.2e-29 131.7 137 52.6
Sc01g0008180 Simmondsia chinensis HOM05D000549 ORTHO05D006202 5.5e-29 131.3 138 54.3
Hma1.2p1_0821F.1_g224190 Hydrangea macrophylla HOM05D000549 ORTHO05D006202 7.2e-29 131.0 132 55.3
Oeu017039.1 Olea europaea HOM05D000549 ORTHO05D006202 7.2e-29 131.0 144 52.8
AUR62018877 Chenopodium quinoa HOM05D000549 ORTHO05D006202 9.5e-29 130.6 137 52.6
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 2.8e-28 129.0 101 65.3
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 2.8e-28 129.0 101 65.3
RcHm_v2.0_Chr7g0204691 Rosa chinensis HOM05D000549 ORTHO05D006202 2.8e-28 129.0 137 54.0
Eucgr.D02114 Eucalyptus grandis HOM05D000549 ORTHO05D006202 3.6e-28 128.6 104 63.5
vmacro00030 Vaccinium macrocarpon HOM05D000549 ORTHO05D006202 3.6e-28 128.6 106 63.2
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 6.1e-28 127.9 104 63.5
CsaV3_3G002440 Cucumis sativus L. HOM05D000549 ORTHO05D006202 6.1e-28 127.9 100 66.0
CSS0022595 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 8.0e-28 127.5 144 53.5
AUR62007136 Chenopodium quinoa HOM05D000549 ORTHO05D006202 1.0e-27 127.1 137 51.8
PSO063G6040 Papaver somniferum HOM05D000549 ORTHO05D006202 1.0e-27 127.1 147 49.0
PGR031G1501 Punica granatum HOM05D000549 ORTHO05D006202 1.0e-27 127.1 159 45.9
MD04G1057400 Malus domestica HOM05D000549 ORTHO05D006202 1.8e-27 126.3 139 55.4
CSS0011014 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 3.0e-27 125.6 143 53.1
DCAR_004604 Daucus carota HOM05D000549 ORTHO05D006202 3.0e-27 125.6 137 50.4
SGA_v2.0_scaffold48G18016 Striga asiatica HOM05D000549 ORTHO05D006202 4.0e-27 125.2 103 61.2
PSO782G4788 Papaver somniferum HOM05D000549 ORTHO05D006202 5.2e-27 124.8 147 48.3
EL10Ac5g12312 Beta vulgaris HOM05D000549 ORTHO05D006202 6.8e-27 124.4 110 58.2
Hund14509 Selenicereus undatus HOM05D000549 ORTHO05D006202 6.8e-27 124.4 133 52.6
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 1.2e-26 123.6 137 54.0
MELO3C013913.2 Cucumis melo HOM05D000549 ORTHO05D006202 1.5e-26 123.2 110 61.8
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 2.0e-26 122.9 101 65.3
Prupe.5G061300 Prunus persica HOM05D000549 ORTHO05D006202 2.0e-26 122.9 98 65.3
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 3.4e-26 122.1 107 64.5
CDE06G1267 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 3.4e-26 122.1 108 60.2
COL.COLO4_10023 Corchorus olitorius HOM05D000549 ORTHO05D006202 5.7e-26 121.3 143 52.4
BcaC07g38022 Brassica carinata HOM05D000549 ORTHO05D006202 7.5e-26 120.9 95 67.4
Peaxi162Scf00260g00420 Petunia axillaris HOM05D000549 ORTHO05D006202 7.5e-26 120.9 141 47.5
Aa31LG2G12980 Aethionema arabicum HOM05D000549 ORTHO05D006202 9.8e-26 120.6 104 63.5
Rhsim04G0179900 Rhododendron simsii HOM05D000549 ORTHO05D006202 9.8e-26 120.6 102 63.7
Aqoxy3G02723 Aquilegia oxysepala HOM05D000549 ORTHO05D006202 1.3e-25 120.2 109 59.6
unitig_32.g11172 Utricularia gibba HOM05D000549 ORTHO05D006202 1.3e-25 120.2 107 58.9
THA.LOC104807916 Tarenaya hassleriana HOM05D000549 ORTHO05D006202 1.7e-25 119.8 104 63.5
Lalb_Chr05g0221011 Lupinus albus HOM05D000549 ORTHO05D006202 4.9e-25 118.2 115 58.3
Haze_07961 Corylus avellana HOM05D000549 ORTHO05D006202 1.1e-24 117.1 144 52.1
Ca_21986_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 1.4e-24 116.7 104 61.5
Ca_21999_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 1.4e-24 116.7 104 61.5
Glyma.05G063900 Glycine max HOM05D000549 ORTHO05D006202 1.4e-24 116.7 122 54.1
SalBow7G1829 Salvia bowleyana HOM05D000549 ORTHO05D006202 1.4e-24 116.7 103 59.2
Lj4g0005647 Lotus japonicus HOM05D000549 ORTHO05D006202 1.8e-24 116.3 104 60.6
Migut.C00200 Erythranthe guttata HOM05D000549 ORTHO05D006202 2.4e-24 115.9 103 59.2
arahy.Tifrunner.gnm1.ann1.5JEW3L Arachis hypogaea HOM05D000549 ORTHO05D006202 3.2e-24 115.5 104 58.7
MSTRG.950 Avicennia marina HOM05D000549 ORTHO05D006202 4.1e-24 115.2 119 50.4
CANSAT21G0274 Cannabis sativa HOM05D000549 ORTHO05D006202 7.0e-24 114.4 102 62.7
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 7.0e-24 114.4 124 51.6
Lsat_1_v5_gn_6_93941 Lactuca sativa HOM05D000549 ORTHO05D006202 7.0e-24 114.4 119 49.6
Medtr4g100350 Medicago truncatula HOM05D000549 ORTHO05D006202 9.2e-24 114.0 104 59.6
Phvul.003G223810 Phaseolus vulgaris HOM05D000549 ORTHO05D006202 9.2e-24 114.0 121 50.4
Sp7g17310 Schrenkiella parvula HOM05D000549 ORTHO05D006202 1.6e-23 113.2 95 62.1
VMungo0251G2614 Vigna mungo HOM05D003706 ORTHO05D006202 1.6e-23 113.2 121 51.2
Carub.0007s2456 Capsella rubella HOM05D000549 ORTHO05D006202 2.0e-23 112.8 107 58.9
Glyma.17G145600 Glycine max HOM05D000549 ORTHO05D006202 2.7e-23 112.5 104 57.7
AL7G37850 Arabidopsis lyrata HOM05D000549 ORTHO05D006202 3.5e-23 112.1 107 57.0
Psat4g074240 Pisum sativum HOM05D000549 ORTHO05D006202 5.9e-23 111.3 94 62.8
Ah.12g054460 Amaranthus hybridus HOM05D000549 ORTHO05D006202 1.7e-22 109.8 119 52.1
AT4G16800 Arabidopsis thaliana HOM05D000549 ORTHO05D006202 2.3e-22 109.4 107 57.0
Zm00001eb249250 Zea mays HOM05D000549 ORTHO05D006202 2.3e-22 109.4 107 55.1
Os02g0654100 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D006202 5.0e-22 108.2 107 54.2
ATR0057G066 Amborella trichopoda HOM05D000549 ORTHO05D006202 1.1e-21 107.1 101 55.4
HanXRQChr03g0089881 Helianthus annuus HOM05D000549 ORTHO05D006202 1.5e-21 106.7 102 53.9
TPR.G10468 Trifolium pratense HOM05D000549 ORTHO05D006202 1.9e-21 106.3 103 60.2
ECA240G4209 Erigeron canadensis HOM05D000549 ORTHO05D006202 4.3e-21 105.1 106 51.9
arahy.Tifrunner.gnm1.ann1.T0QXQZ Arachis hypogaea HOM05D000549 ORTHO05D006202 9.5e-21 104.0 104 51.9
arahy.Tifrunner.gnm1.ann1.V8INB7 Arachis hypogaea HOM05D000549 ORTHO05D006202 9.5e-21 104.0 104 51.9
HPP92_002098 Vanilla planifolia HOM05D000549 ORTHO05D006202 6.1e-20 101.3 103 51.5
arahy.Tifrunner.gnm1.ann1.U9FTP0 Arachis hypogaea HOM05D000549 ORTHO05D006202 1.0e-19 100.5 106 52.8
CDE06G0094 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 1.2e-18 97.1 75 62.7
FAN08G1945 Fragaria x ananassa HOM05D000549 ORTHO05D006202 2.0e-18 96.3 75 61.3
Psat4g074280 Pisum sativum HOM05D000549 ORTHO05D006202 9.8e-18 94.0 106 54.7
Psat0s5275g0040 Pisum sativum HOM05D000549 ORTHO05D006202 2.4e-16 89.4 72 63.9
Pp3c16_17130 Physcomitrium patens HOM05D000549 ORTHO05D006202 1.6e-15 86.7 102 47.1
Actinidia27683 Actinidia chinensis HOM05D000549 ORTHO05D006202 3.5e-15 85.5 107 50.5
Os02g0654000 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D006202 7.8e-15 84.3 87 50.6
AagrBONN_evm.TU.Sc2ySwM_228.5010 Anthoceros agrestis HOM05D000549 ORTHO05D006202 6.6e-14 81.3 94 40.4
Mapoly0034s0004 Marchantia polymorpha HOM05D000549 ORTHO05D006202 4.3e-13 78.6 100 44.0
Zm00001eb249240 Zea mays HOM05D000549 ORTHO05D006202 4.3e-13 78.6 112 42.0
Actinidia10849 Actinidia chinensis HOM05D000549 ORTHO05D006202 9.5e-13 77.4 55 67.3
CAN.G158.35 Capsicum annuum HOM05D000549 ORTHO05D006202 3.1e-11 72.4 57 57.9
arahy.Tifrunner.gnm1.ann1.QAQ0BW Arachis hypogaea HOM05D000563 ORTHO05D000536 4.0e-11 72.0 73 45.2
Cre02.g091850 Chlamydomonas reinhardtii HOM05D000549 ORTHO05D006202 5.8e-10 68.2 81 40.7
Lalb_Chr00c54g0413641 Lupinus albus HOM05D000549 ORTHO05D006202 1.1e-08 63.9 134 36.6
Lalb_Chr00c24g0407461 Lupinus albus HOM05D000549 ORTHO05D006202 2.4e-08 62.8 51 60.8
PSO541G1666 Papaver somniferum HOM05D000549 ORTHO05D006202 2.4e-08 62.8 61 54.1
MD02G1254000 Malus domestica HOM05D037583 ORTHO05D003348 1.0e-06 57.4 53 50.9
PRCOL_00000103 Prasinoderma coloniale HOM05D000549 ORTHO05D006202 2.3e-06 56.2 92 32.6


User provided reference genes

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