Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO353G0175 Selaginella moellendorffii HOM05D007021 ORTHO05D008916 5.1e-94 347.8 187 100.0
Pp3c5_23310 Physcomitrium patens HOM05D007021 ORTHO05D008916 8.6e-41 171.0 139 66.2
SEGI_41594 Sequoiadendron giganteum HOM05D007021 ORTHO05D008916 7.2e-40 167.9 112 75.0
Gohir.A09G174900 Gossypium hirsutum HOM05D007021 ORTHO05D008916 8.9e-38 161.0 146 63.0
Gohir.D09G170185 Gossypium hirsutum HOM05D007021 ORTHO05D008916 8.9e-38 161.0 146 63.0
Gorai.006G191500 Gossypium raimondii HOM05D007021 ORTHO05D008916 8.9e-38 161.0 146 63.0
VMungo0251G3404 Vigna mungo HOM05D007021 ORTHO05D008916 8.9e-38 161.0 113 72.6
Glyma.05G246900 Glycine max HOM05D007021 ORTHO05D008916 3.4e-37 159.1 135 63.7
CiPaw.16G096000 Carya illinoinensis HOM05D007021 ORTHO05D008916 9.8e-37 157.5 149 58.4
HanXRQChr15g0486591 Helianthus annuus HOM05D007021 ORTHO05D008916 9.8e-37 157.5 129 64.3
Glyma.08G055300 Glycine max HOM05D007021 ORTHO05D008916 1.3e-36 157.1 135 62.2
Hma1.2p1_0163F.1_g073000 Hydrangea macrophylla HOM05D007021 ORTHO05D008916 1.3e-36 157.1 135 61.5
Mapoly0023s0040 Marchantia polymorpha HOM05D007021 ORTHO05D008916 1.3e-36 157.1 166 53.6
Lsat_1_v5_gn_8_115881 Lactuca sativa HOM05D007021 ORTHO05D008916 1.7e-36 156.8 116 68.1
unitig_899.g15339 Utricularia gibba HOM05D007021 ORTHO05D008916 1.7e-36 156.8 151 60.3
TWI81G0868 Tripterygium wilfordii HOM05D007021 ORTHO05D008916 2.2e-36 156.4 116 69.8
Atru.chr9.1670 Acer truncatum HOM05D007021 ORTHO05D008916 2.9e-36 156.0 156 55.1
COL.COLO4_28897 Corchorus olitorius HOM05D007021 ORTHO05D008916 2.9e-36 156.0 137 61.3
Nn7g37125 Nelumbo nucifera HOM05D007021 ORTHO05D008916 2.9e-36 156.0 114 71.9
AagrBONN_evm.TU.Sc2ySwM_340.579 Anthoceros agrestis HOM05D007021 ORTHO05D008916 3.7e-36 155.6 115 70.4
Ciclev10009503m.g Citrus clementina HOM05D007021 ORTHO05D008916 3.7e-36 155.6 156 53.8
Dinv18013 Davidia involucrata HOM05D007021 ORTHO05D008916 3.7e-36 155.6 134 61.2
Manes.06G004800 Manihot esculenta HOM05D007021 ORTHO05D008916 3.7e-36 155.6 118 70.3
Phvul.002G331000 Phaseolus vulgaris HOM05D007021 ORTHO05D008916 3.7e-36 155.6 148 58.1
Cfa019639 Carpinus fangiana HOM05D007021 ORTHO05D008916 4.9e-36 155.2 113 69.9
Cpa.g.sc3.381 Carica papaya HOM05D007021 ORTHO05D008916 6.4e-36 154.8 109 74.3
Cc04_g06110 Coffea canephora HOM05D007021 ORTHO05D008916 6.4e-36 154.8 112 71.4
Thecc.03G058600 Theobroma cacao HOM05D007021 ORTHO05D008916 6.4e-36 154.8 137 60.6
GSVIVG01008459001 Vitis vinifera HOM05D007021 ORTHO05D008916 6.4e-36 154.8 119 65.5
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 8.3e-36 154.5 150 58.7
AagrBONN_evm.TU.Sc2ySwM_117.710 Anthoceros agrestis HOM05D007021 ORTHO05D008916 8.3e-36 154.5 165 54.5
CANSAT80G0297 Cannabis sativa HOM05D007021 ORTHO05D008916 8.3e-36 154.5 132 62.1
CANSAT80G1746 Cannabis sativa HOM05D007021 ORTHO05D008916 8.3e-36 154.5 139 59.7
CSS0017706 Camellia sinensis var. sinensis HOM05D007021 ORTHO05D008916 1.1e-35 154.1 122 68.9
Gorai.003G035100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.1e-35 154.1 146 61.0
PGR044G2095 Punica granatum HOM05D007021 ORTHO05D008916 1.4e-35 153.7 134 61.2
Eucgr.K02276 Eucalyptus grandis HOM05D007021 ORTHO05D008916 1.8e-35 153.3 149 58.4
Os01g0805200 Oryza sativa ssp. japonica HOM05D007021 ORTHO05D008916 1.8e-35 153.3 109 68.8
QL10p030610 Quercus lobata HOM05D007021 ORTHO05D008916 1.8e-35 153.3 114 70.2
Sabra15G0029900 Salix brachista HOM05D007021 ORTHO05D008916 1.8e-35 153.3 182 53.8
Solyc05g006440.4 Solanum lycopersicum HOM05D007021 ORTHO05D008916 1.8e-35 153.3 130 61.5
MELO3C017374.2 Cucumis melo HOM05D007021 ORTHO05D008916 2.4e-35 152.9 113 69.9
Potri.015G036500 Populus trichocarpa HOM05D007021 ORTHO05D008916 2.4e-35 152.9 119 66.4
TAR623G0728 Trochodendron aralioides HOM05D007021 ORTHO05D008916 3.2e-35 152.5 119 67.2
HPP92_019433 Vanilla planifolia HOM05D007021 ORTHO05D008916 3.2e-35 152.5 119 65.5
Zm00001eb150510 Zea mays HOM05D007021 ORTHO05D008916 3.2e-35 152.5 156 55.8
CsaV3_1G004470 Cucumis sativus L. HOM05D007021 ORTHO05D008916 4.1e-35 152.1 115 70.4
Gohir.D03G033500 Gossypium hirsutum HOM05D007021 ORTHO05D008916 4.1e-35 152.1 146 59.6
Sc04g0004860 Simmondsia chinensis HOM05D007021 ORTHO05D008916 4.1e-35 152.1 113 69.0
Aqoxy1G00082 Aquilegia oxysepala HOM05D007021 ORTHO05D008916 5.4e-35 151.8 115 67.8
MBI13_g41749_MAGBIO Magnolia biondii HOM05D007021 ORTHO05D008916 5.4e-35 151.8 103 73.8
Sopen05g002370 Solanum pennellii HOM05D007021 ORTHO05D008916 5.4e-35 151.8 130 60.8
Gohir.D08G085600 Gossypium hirsutum HOM05D007021 ORTHO05D008916 7.0e-35 151.4 146 59.6
Lj4g0002555 Lotus japonicus HOM05D007021 ORTHO05D008916 7.0e-35 151.4 112 69.6
Lalb_Chr05g0221591 Lupinus albus HOM05D007021 ORTHO05D008916 7.0e-35 151.4 113 67.3
ECA232G1431 Erigeron canadensis HOM05D000006 ORTHO05D000091 9.2e-35 151.0 110 69.1
MD06G1228200 Malus domestica HOM05D007021 ORTHO05D008916 9.2e-35 151.0 113 68.1
Rhsim12G0138000 Rhododendron simsii HOM05D007021 ORTHO05D008916 9.2e-35 151.0 108 72.2
Sed0001257 Sechium edule HOM05D007021 ORTHO05D008916 9.2e-35 151.0 115 71.3
PGSC0003DMG400022612 Solanum tuberosum HOM05D007021 ORTHO05D008916 9.2e-35 151.0 109 71.6
ATR1096G089 Amborella trichopoda HOM05D007021 ORTHO05D008916 1.2e-34 150.6 141 58.9
CAN.G159.4 Capsicum annuum HOM05D007021 ORTHO05D008916 1.2e-34 150.6 109 71.6
Nitab4.5_0002312g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.2e-34 150.6 109 69.7
Nitab4.5_0004119g0020 Nicotiana tabacum HOM05D007021 ORTHO05D008916 1.2e-34 150.6 109 69.7
arahy.Tifrunner.gnm1.ann1.I2I16V Arachis hypogaea HOM05D007021 ORTHO05D008916 1.6e-34 150.2 106 70.8
Gorai.004G090100 Gossypium raimondii HOM05D007021 ORTHO05D008916 1.6e-34 150.2 114 67.5
Prupe.5G234700 Prunus persica HOM05D007021 ORTHO05D008916 1.6e-34 150.2 137 59.9
THA.LOC104821829 Tarenaya hassleriana HOM05D007021 ORTHO05D008916 1.6e-34 150.2 112 68.8
ClCG06G014200 Citrullus lanatus HOM05D007021 ORTHO05D008916 2.0e-34 149.8 109 71.6
arahy.Tifrunner.gnm1.ann1.2FQ1SS Arachis hypogaea HOM05D007021 ORTHO05D008916 2.7e-34 149.4 106 70.8
EL10Ac8g19152 Beta vulgaris HOM05D007021 ORTHO05D008916 3.5e-34 149.1 104 72.1
Psat7g001280 Pisum sativum HOM05D007021 ORTHO05D008916 4.6e-34 148.7 105 70.5
RcHm_v2.0_Chr7g0178211 Rosa chinensis HOM05D007021 ORTHO05D008916 4.6e-34 148.7 151 54.3
FAN04G2374 Fragaria x ananassa HOM05D007021 ORTHO05D008916 5.9e-34 148.3 119 63.9
MSTRG.11303 Avicennia marina HOM05D007021 ORTHO05D008916 7.8e-34 147.9 141 59.6
FvH4_5g17480 Fragaria vesca HOM05D007021 ORTHO05D008916 7.8e-34 147.9 119 63.9
FAN08G1321 Fragaria x ananassa HOM05D007021 ORTHO05D008916 7.8e-34 147.9 119 63.9
FAN18G1853 Fragaria x ananassa HOM05D007021 ORTHO05D008916 7.8e-34 147.9 119 63.9
Lj9A418T22 Lonicera japonica HOM05D007021 ORTHO05D008916 1.0e-33 147.5 109 69.7
FAN13G1201 Fragaria x ananassa HOM05D007021 ORTHO05D008916 1.3e-33 147.1 119 63.9
Oeu046158.1 Olea europaea HOM05D007021 ORTHO05D008916 1.3e-33 147.1 103 73.8
Migut.I00268 Erythranthe guttata HOM05D007021 ORTHO05D008916 1.7e-33 146.7 121 62.8
PSO339G6055 Papaver somniferum HOM05D007021 ORTHO05D008916 2.3e-33 146.4 141 58.2
C05p48360 Brassica napus HOM05D007021 ORTHO05D008916 3.9e-33 145.6 153 51.6
Hund08707 Selenicereus undatus HOM05D007021 ORTHO05D008916 3.9e-33 145.6 103 69.9
BcaB06g25855 Brassica carinata HOM05D007021 ORTHO05D008916 5.0e-33 145.2 151 51.0
Haze_18883 Corylus avellana HOM05D007021 ORTHO05D008916 5.0e-33 145.2 155 57.4
Sp3g16050 Schrenkiella parvula HOM05D007021 ORTHO05D008916 6.6e-33 144.8 159 51.6
TPR.G1394 Trifolium pratense HOM05D007021 ORTHO05D008916 8.6e-33 144.4 105 69.5
BcaC05g28735 Brassica carinata HOM05D007021 ORTHO05D008916 1.1e-32 144.1 106 66.0
A05p31870 Brassica napus HOM05D007021 ORTHO05D008916 1.1e-32 144.1 106 66.0
BolC5t33573H Brassica oleracea HOM05D007021 ORTHO05D008916 1.1e-32 144.1 106 66.0
BraA05t22019Z Brassica rapa HOM05D007021 ORTHO05D008916 1.1e-32 144.1 106 66.0
CARHR093260 Cardamine hirsuta HOM05D007021 ORTHO05D008916 1.1e-32 144.1 112 62.5
Medtr8g107430 Medicago truncatula HOM05D007021 ORTHO05D008916 1.1e-32 144.1 105 69.5
Carub.0003s1766 Capsella rubella HOM05D007021 ORTHO05D008916 1.5e-32 143.7 102 68.6
PSO384G2008 Papaver somniferum HOM05D007021 ORTHO05D008916 1.5e-32 143.7 106 69.8
AL3G31100 Arabidopsis lyrata HOM05D007021 ORTHO05D008916 2.5e-32 142.9 102 67.6
AT3G17930 Arabidopsis thaliana HOM05D007021 ORTHO05D008916 2.5e-32 142.9 102 67.6
CDE04G1339 Ceratophyllum demersum HOM05D000015 ORTHO05D002445 2.5e-32 142.9 122 60.7
Aa31LG8G4800 Aethionema arabicum HOM05D007021 ORTHO05D008916 4.3e-32 142.1 131 55.0
Thhalv10021570m.g Eutrema salsugineum HOM05D007021 ORTHO05D008916 4.3e-32 142.1 172 47.7
CBR_g48186 Chara braunii HOM05D007021 ORTHO05D008916 1.5e-29 133.7 115 59.1
CDE07G1635 Ceratophyllum demersum HOM05D007021 ORTHO05D008916 4.4e-29 132.1 118 60.2
Gohir.1Z049463 Gossypium hirsutum HOM05D007021 ORTHO05D008916 1.7e-25 120.2 146 53.4
DCAR_014390 Daucus carota HOM05D007021 ORTHO05D008916 1.4e-22 110.5 86 68.6
Duzib068G0088 Durio zibethinus HOM05D007021 ORTHO05D008916 1.8e-22 110.2 87 67.8
Cre01.g000850 Chlamydomonas reinhardtii HOM05D007021 ORTHO05D008916 4.4e-21 105.5 125 44.0
Peaxi162Scf00828g00016 Petunia axillaris HOM05D007021 ORTHO05D008916 9.8e-21 104.4 81 67.9
MCO16G182 Micromonas commoda HOM05D007021 ORTHO05D008916 2.2e-20 103.2 98 56.1
AUR62025165 Chenopodium quinoa HOM05D007021 ORTHO05D008916 8.3e-20 101.3 81 64.2
AUR62029014 Chenopodium quinoa HOM05D007021 ORTHO05D008916 8.3e-20 101.3 81 64.2
PRCOL_00000692 Prasinoderma coloniale HOM05D007021 ORTHO05D008916 6.8e-14 81.6 102 43.1
Oeu010907.1 Olea europaea HOM05D007021 ORTHO05D008916 8.9e-14 81.3 52 75.0
MD14G1237400 Malus domestica HOM05D007021 ORTHO05D008916 1.5e-13 80.5 51 72.5


User provided reference genes

Program Settings