Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 2.9e-102 375.2 180 100.0
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 1.1e-61 240.4 182 62.6
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 4.6e-60 235.0 179 60.3
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 1.4e-59 233.4 179 58.7
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 1.4e-59 233.4 179 57.5
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.8e-59 233.0 179 58.7
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 1.8e-59 233.0 179 60.3
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.8e-59 233.0 179 59.2
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 2.3e-59 232.6 179 57.5
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 3.9e-59 231.9 179 58.7
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 5.1e-59 231.5 179 58.1
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 8.8e-59 230.7 179 56.4
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.1e-58 230.3 179 56.4
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 4.4e-58 228.4 179 57.5
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 5.7e-58 228.0 179 56.4
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 9.7e-58 227.3 179 57.0
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 2.2e-57 226.1 179 55.9
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 2.8e-57 225.7 179 56.4
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 3.7e-57 225.3 179 56.4
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 1.1e-56 223.8 179 58.1
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 1.4e-56 223.4 179 57.5
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 1.8e-56 223.0 179 53.6
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 2.4e-56 222.6 179 56.4
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 3.1e-56 222.2 179 54.2
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 3.1e-56 222.2 179 56.4
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 5.3e-56 221.5 179 56.4
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 9.1e-56 220.7 179 58.1
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 1.2e-55 220.3 179 54.7
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 5.9e-55 218.0 179 57.0
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 7.7e-55 217.6 179 54.7
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 7.7e-55 217.6 179 54.7
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 7.7e-55 217.6 180 55.0
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 7.7e-55 217.6 179 55.9
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.0e-54 217.2 179 55.3
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 1.0e-54 217.2 180 56.7
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 2.2e-54 216.1 178 56.7
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 2.9e-54 215.7 179 54.2
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 3.8e-54 215.3 179 55.3
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 3.8e-54 215.3 179 53.1
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 6.5e-54 214.5 180 56.1
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 1.4e-53 213.4 179 57.5
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.4e-53 213.4 185 54.6
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 4.2e-53 211.8 179 55.3
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 5.5e-53 211.5 179 55.3
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 5.5e-53 211.5 179 54.7
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.2e-52 210.3 179 54.7
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 3.6e-52 208.8 179 53.6
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 1.0e-51 207.2 179 53.6
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 1.8e-51 206.5 179 52.5
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 1.8e-51 206.5 183 53.0
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.3e-51 206.1 180 52.2
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 2.3e-51 206.1 180 52.2
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.0e-51 205.7 180 52.2
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 3.9e-51 205.3 180 51.7
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 3.9e-51 205.3 184 57.1
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 3.9e-51 205.3 179 55.3
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 2.0e-50 203.0 181 55.2
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 5.7e-50 201.4 180 51.1
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.2e-49 199.5 182 51.1
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 2.4e-48 196.1 182 50.5
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 4.1e-48 195.3 180 50.0
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 4.1e-48 195.3 180 50.6
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.2e-47 193.7 183 51.4
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 2.2e-46 189.5 222 42.8
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.9e-46 189.1 183 50.3
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 6.5e-46 188.0 182 50.0
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 6.5e-46 188.0 180 50.6
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 3.6e-44 182.2 172 48.3
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 1.8e-43 179.9 182 47.8
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.8e-43 179.9 179 46.4
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 5.2e-43 178.3 182 47.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 5.2e-43 178.3 170 48.8
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 8.8e-43 177.6 179 45.8
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 5.7e-42 174.9 169 49.1
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 5.7e-42 174.9 169 49.1
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 2.8e-41 172.6 164 50.0
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 2.4e-40 169.5 136 57.4
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 1.6e-39 166.8 132 56.8
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 8.5e-38 161.0 179 44.7
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 3.2e-37 159.1 161 46.6
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 1.0e-35 154.1 181 43.6
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 8.3e-33 144.4 131 51.1
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.2e-25 119.8 106 51.9
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 8.3e-25 117.9 181 40.9
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 5.4e-24 115.2 118 47.5
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 2.2e-17 93.2 182 35.7
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 6.4e-17 91.7 97 46.4
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 6.4e-17 91.7 182 35.7
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 6.4e-17 91.7 59 61.0
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.4e-16 89.7 59 59.3
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 3.0e-14 82.8 92 44.6
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 3.9e-14 82.4 68 52.9
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 5.8e-10 68.6 75 45.3
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 9.8e-10 67.8 114 36.0
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.9e-08 63.5 47 55.3
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 1.6e-07 60.5 118 30.5
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 1.0e-06 57.8 48 47.9


User provided reference genes

Program Settings