Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO340G0127 Selaginella moellendorffii HOM05D006775 ORTHO05D008344 9.6e-89 330.1 163 100.0
Pp3c2_550 Physcomitrium patens HOM05D006775 ORTHO05D008344 3.0e-42 175.6 166 53.6
ATR0706G197 Amborella trichopoda HOM05D006775 ORTHO05D008344 2.8e-40 169.1 163 51.5
MBI18_g12413_MAGBIO Magnolia biondii HOM05D006775 ORTHO05D008344 2.8e-32 142.5 155 43.9
Lj3A812T71 Lonicera japonica HOM05D006775 ORTHO05D008344 4.1e-31 138.7 150 44.7
Manes.15G016600 Manihot esculenta HOM05D006775 ORTHO05D008344 5.4e-31 138.3 164 42.1
Atru.chr4.2756 Acer truncatum HOM05D006775 ORTHO05D008344 7.0e-31 137.9 161 44.7
arahy.Tifrunner.gnm1.ann1.HV9WHL Arachis hypogaea HOM05D006775 ORTHO05D008344 1.6e-30 136.7 153 46.4
arahy.Tifrunner.gnm1.ann1.UNR197 Arachis hypogaea HOM05D006775 ORTHO05D008344 1.6e-30 136.7 153 46.4
Nn3g21322 Nelumbo nucifera HOM05D006775 ORTHO05D008344 5.9e-30 134.8 162 43.2
Actinidia40225 Actinidia chinensis HOM05D006775 ORTHO05D008344 7.7e-30 134.4 145 44.8
Thecc.04G277900 Theobroma cacao HOM05D006775 ORTHO05D008344 1.0e-29 134.0 154 45.5
COL.COLO4_13925 Corchorus olitorius HOM05D006775 ORTHO05D008344 1.3e-29 133.7 154 44.2
Ciclev10006777m.g Citrus clementina HOM05D000611 ORTHO05D000809 2.3e-29 132.9 138 45.7
MD00G1092600 Malus domestica HOM05D006775 ORTHO05D008344 2.9e-29 132.5 153 45.1
Nn4g25991 Nelumbo nucifera HOM05D006775 ORTHO05D008344 2.9e-29 132.5 162 41.4
TAR633G2345 Trochodendron aralioides HOM05D001386 ORTHO05D003791 2.9e-29 132.5 145 46.9
Phvul.003G101000 Phaseolus vulgaris HOM05D006775 ORTHO05D008344 3.8e-29 132.1 147 45.6
Psat4g030480 Pisum sativum HOM05D006775 ORTHO05D008344 5.0e-29 131.7 154 43.5
MSTRG.10056 Avicennia marina HOM05D006775 ORTHO05D008344 6.6e-29 131.3 146 45.9
Glyma.07G251400 Glycine max HOM05D006775 ORTHO05D008344 6.6e-29 131.3 141 47.5
Hma1.2p1_0823F.1_g224630 Hydrangea macrophylla HOM05D006775 ORTHO05D008344 8.6e-29 131.0 145 42.8
Prupe.1G365500 Prunus persica HOM05D006775 ORTHO05D008344 8.6e-29 131.0 159 42.8
SalBow2G3406 Salvia bowleyana HOM05D006775 ORTHO05D008344 8.6e-29 131.0 161 43.5
Cfa015346 Carpinus fangiana HOM05D006775 ORTHO05D008344 2.5e-28 129.4 154 44.2
VMungo1215G1959 Vigna mungo HOM05D006775 ORTHO05D008344 3.3e-28 129.0 148 43.9
Duzib151G0911 Durio zibethinus HOM05D006775 ORTHO05D008344 4.2e-28 128.6 141 46.1
Oeu062887.1 Olea europaea HOM05D006775 ORTHO05D008344 4.2e-28 128.6 161 41.0
Glyma.17G022900 Glycine max HOM05D006775 ORTHO05D008344 5.5e-28 128.3 141 46.8
Lalb_Chr13g0303871 Lupinus albus HOM05D006775 ORTHO05D008344 5.5e-28 128.3 142 46.5
TWI09G0159 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.2e-28 127.9 147 45.6
TWI09G0165 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.2e-28 127.9 147 45.6
TWI09G0706 Tripterygium wilfordii HOM05D006775 ORTHO05D008344 7.2e-28 127.9 147 45.6
SGA_v2.0_scaffold57G20240 Striga asiatica HOM05D006775 ORTHO05D008344 2.1e-27 126.3 146 43.2
HanXRQChr03g0079491 Helianthus annuus HOM05D006775 ORTHO05D008344 3.6e-27 125.6 146 45.2
Medtr4g118790 Medicago truncatula HOM05D006775 ORTHO05D008344 3.6e-27 125.6 153 42.5
QL06p007489 Quercus lobata HOM05D006775 ORTHO05D008344 4.7e-27 125.2 145 44.1
vmacro08201 Vaccinium macrocarpon HOM05D006775 ORTHO05D008344 4.7e-27 125.2 141 44.7
GSVIVG01017799001 Vitis vinifera HOM05D000611 ORTHO05D000809 4.7e-27 125.2 161 42.9
Gorai.011G186100 Gossypium raimondii HOM05D006775 ORTHO05D008344 8.0e-27 124.4 155 42.6
Migut.G00207 Erythranthe guttata HOM05D006775 ORTHO05D008344 1.0e-26 124.0 146 44.5
Gohir.D10G166800 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.0e-26 124.0 155 41.9
Lsat_1_v5_gn_5_50761 Lactuca sativa HOM05D006775 ORTHO05D008344 1.0e-26 124.0 146 45.9
AagrBONN_evm.TU.Sc2ySwM_362.2565 Anthoceros agrestis HOM05D006775 ORTHO05D008344 1.8e-26 123.2 136 48.5
EL10Ac3g06567 Beta vulgaris HOM05D006775 ORTHO05D008344 2.3e-26 122.9 144 43.8
Lj4g0016853 Lotus japonicus HOM05D006775 ORTHO05D008344 2.3e-26 122.9 156 41.0
Psat4g030400 Pisum sativum HOM05D006775 ORTHO05D008344 2.3e-26 122.9 154 41.6
TPR.G14956 Trifolium pratense HOM05D006775 ORTHO05D008344 2.3e-26 122.9 153 41.2
Eucgr.H03770 Eucalyptus grandis HOM05D006775 ORTHO05D008344 3.0e-26 122.5 151 41.1
PGR004G1240 Punica granatum HOM05D006775 ORTHO05D008344 3.0e-26 122.5 148 41.2
Sc25g0004760 Simmondsia chinensis HOM05D006775 ORTHO05D008344 8.9e-26 120.9 154 41.6
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 1.2e-25 120.6 145 42.1
CiPaw.02G086400 Carya illinoinensis HOM05D006775 ORTHO05D008344 1.2e-25 120.6 146 41.8
ECA240G4404 Erigeron canadensis HOM05D006775 ORTHO05D008344 1.5e-25 120.2 146 43.2
Cpa.g.sc1008.3 Carica papaya HOM05D006775 ORTHO05D008344 3.4e-25 119.0 145 42.1
AUR62042989 Chenopodium quinoa HOM05D006775 ORTHO05D008344 3.4e-25 119.0 143 42.0
Gohir.A10G101330 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.4e-25 118.6 155 41.3
Cc03_g02340 Coffea canephora HOM05D006775 ORTHO05D008344 7.5e-25 117.9 146 40.4
RcHm_v2.0_Chr6g0302841 Rosa chinensis HOM05D006775 ORTHO05D008344 1.7e-24 116.7 152 40.8
DCAR_002444 Daucus carota HOM05D006775 ORTHO05D008344 2.2e-24 116.3 161 37.3
Nitab4.5_0003256g0010 Nicotiana tabacum HOM05D006775 ORTHO05D008344 3.7e-24 115.5 146 41.8
unitig_32.g10786 Utricularia gibba HOM05D006775 ORTHO05D008344 3.7e-24 115.5 150 43.3
CBR_g21749 Chara braunii HOM05D006775 ORTHO05D008344 8.3e-24 114.4 163 41.1
Peaxi162Scf00386g00010 Petunia axillaris HOM05D006775 ORTHO05D008344 1.1e-23 114.0 146 41.8
HPP92_025229 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.1e-23 114.0 143 43.4
HPP92_025211 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.8e-23 113.2 143 43.4
HPP92_025275 Vanilla planifolia HOM05D006775 ORTHO05D008344 1.8e-23 113.2 143 43.4
Potri.008G204800 Populus trichocarpa HOM05D006775 ORTHO05D008344 2.4e-23 112.8 153 39.9
Aqoxy5G01958 Aquilegia oxysepala HOM05D006775 ORTHO05D008344 3.2e-23 112.5 145 40.0
Nitab4.5_0005595g0020 Nicotiana tabacum HOM05D006775 ORTHO05D008344 3.2e-23 112.5 146 41.1
Sp7g13860 Schrenkiella parvula HOM05D006775 ORTHO05D008344 7.0e-23 111.3 145 42.1
AL7G39920 Arabidopsis lyrata HOM05D006775 ORTHO05D008344 9.2e-23 110.9 145 43.4
BcaNung00261 Brassica carinata HOM05D006775 ORTHO05D008344 9.2e-23 110.9 145 42.1
CsaV3_3G014150 Cucumis sativus L. HOM05D006775 ORTHO05D008344 1.6e-22 110.2 141 40.4
Carub.0007s2625 Capsella rubella HOM05D006775 ORTHO05D008344 2.0e-22 109.8 145 42.1
CARHR289990 Cardamine hirsuta HOM05D006775 ORTHO05D008344 2.0e-22 109.8 145 41.4
Sabra08G0157200 Salix brachista HOM05D006775 ORTHO05D008344 2.0e-22 109.8 153 39.2
BcaC09g50254 Brassica carinata HOM05D001154 ORTHO05D001175 2.7e-22 109.4 145 42.1
C01p27330 Brassica napus HOM05D006775 ORTHO05D008344 2.7e-22 109.4 145 42.1
BolC1t02676H Brassica oleracea HOM05D006775 ORTHO05D008344 2.7e-22 109.4 145 42.1
MELO3C006607.2 Cucumis melo HOM05D006775 ORTHO05D008344 2.7e-22 109.4 141 39.7
Haze_01265 Corylus avellana HOM05D006775 ORTHO05D008344 3.5e-22 109.0 162 38.9
ClCG05G005800 Citrullus lanatus HOM05D006775 ORTHO05D008344 4.5e-22 108.6 141 40.4
PGSC0003DMG400022660 Solanum tuberosum HOM05D006775 ORTHO05D008344 4.5e-22 108.6 161 38.5
Thhalv10026419m.g Eutrema salsugineum HOM05D006775 ORTHO05D008344 1.3e-21 107.1 145 41.4
A01p21970 Brassica napus HOM05D006775 ORTHO05D008344 1.7e-21 106.7 145 41.4
BraA01t02103Z Brassica rapa HOM05D006775 ORTHO05D008344 1.7e-21 106.7 145 41.4
Aa31LG9G1860 Aethionema arabicum HOM05D006775 ORTHO05D008344 2.3e-21 106.3 147 39.5
AT4G15563 Arabidopsis thaliana HOM05D006775 ORTHO05D008344 2.3e-21 106.3 145 41.4
Solyc01g067280.3 Solanum lycopersicum HOM05D006775 ORTHO05D008344 2.3e-21 106.3 161 38.5
Sopen01g029070 Solanum pennellii HOM05D006775 ORTHO05D008344 3.9e-21 105.5 161 37.9
Rhsim04G0216500 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.5e-20 102.8 205 31.7
Ca_21549_v3 Cicer arietinum L. HOM05D006775 ORTHO05D008344 4.3e-20 102.1 143 37.8
Sed0012602 Sechium edule HOM05D006775 ORTHO05D008344 4.3e-20 102.1 139 38.8
PSO832G0266 Papaver somniferum HOM05D006775 ORTHO05D008344 5.6e-20 101.7 146 39.0
Gohir.D09G234500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 4.7e-19 98.6 141 41.1
Os05g0372800 Oryza sativa ssp. japonica HOM05D006775 ORTHO05D008344 4.7e-19 98.6 139 41.7
Gorai.006G257400 Gossypium raimondii HOM05D006775 ORTHO05D008344 6.1e-19 98.2 141 40.4
Zm00001eb285420 Zea mays HOM05D006775 ORTHO05D008344 8.0e-19 97.8 145 40.7
Gohir.A09G233400 Gossypium hirsutum HOM05D006775 ORTHO05D008344 1.4e-18 97.1 141 40.4
THA.LOC104820238 Tarenaya hassleriana HOM05D006775 ORTHO05D008344 3.1e-18 95.9 141 36.2
CDE08G1672 Ceratophyllum demersum HOM05D006775 ORTHO05D008344 2.9e-16 89.4 89 43.8
Zm00001eb351020 Zea mays HOM05D006775 ORTHO05D008344 1.1e-15 87.4 146 39.7
Gohir.D10G153500 Gossypium hirsutum HOM05D006775 ORTHO05D008344 2.7e-14 82.8 148 35.8
Duzib052G0853 Durio zibethinus HOM05D006775 ORTHO05D008344 1.3e-13 80.5 144 34.7
FAN20G0357 Fragaria x ananassa HOM05D006775 ORTHO05D008344 3.0e-13 79.3 212 27.4
FvH4_2g38460 Fragaria vesca HOM05D006775 ORTHO05D008344 8.6e-13 77.8 212 26.9
Gorai.011G171400 Gossypium raimondii HOM05D006775 ORTHO05D008344 1.2e-11 73.9 115 37.4
CANSAT78G0382 Cannabis sativa HOM05D006775 ORTHO05D008344 4.7e-11 72.0 88 38.6
Eucgr.A01819 Eucalyptus grandis HOM05D006775 ORTHO05D008344 4.7e-11 72.0 85 38.8
CSS0032456 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 5.2e-10 68.6 63 49.2
Rhsim12G0090200 Rhododendron simsii HOM05D006775 ORTHO05D008344 2.6e-09 66.2 89 33.7
CSS0028683 Camellia sinensis var. sinensis HOM05D006775 ORTHO05D008344 3.4e-09 65.9 75 44.0
Dinv38323 Davidia involucrata HOM05D006775 ORTHO05D008344 3.2e-07 59.3 70 45.7
Oeu052260.1 Olea europaea HOM05D006775 ORTHO05D008344 1.2e-06 57.4 143 30.1
Actinidia23427 Actinidia chinensis HOM05D006775 ORTHO05D008344 2.7e-06 56.2 65 41.5
MD09G1114900 Malus domestica HOM05D006775 ORTHO05D008344 6.0e-06 55.1 75 40.0


User provided reference genes

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