Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO268G0015 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 4.7e-252 874.0 432 100.0
SMO174G0009 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.1e-176 623.6 557 63.2
Pp3c2_90 Physcomitrium patens HOM05D005963 ORTHO05D006869 4.9e-31 139.8 373 29.2
Pp3c18_1570 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.1e-29 134.4 375 28.8
Pp3c26_6160 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.7e-29 134.0 375 29.3
Pp3c26_6250 Physcomitrium patens HOM05D005963 ORTHO05D006869 2.7e-29 134.0 375 29.3
SMO358G0565 Selaginella moellendorffii HOM05D001046 ORTHO05D007174 2.7e-29 134.0 412 27.2
SEGI_31852 Sequoiadendron giganteum HOM05D005963 ORTHO05D006869 1.5e-19 101.7 359 24.8
PSO478G0110 Papaver somniferum HOM05D005963 ORTHO05D006869 7.3e-19 99.4 390 25.4
TAR374G1343 Trochodendron aralioides HOM05D005963 ORTHO05D006869 2.8e-18 97.4 451 23.9
PSO782G2761 Papaver somniferum HOM05D005963 ORTHO05D006869 3.6e-18 97.1 390 22.6
Prupe.2G286400 Prunus persica HOM05D005963 ORTHO05D006869 6.2e-18 96.3 381 22.6
arahy.Tifrunner.gnm1.ann1.G2RQNR Arachis hypogaea HOM05D005963 ORTHO05D006869 1.8e-17 94.7 400 22.5
Lalb_Chr19g0131211 Lupinus albus HOM05D005963 ORTHO05D006869 1.8e-17 94.7 343 24.2
BolC2t08150H Brassica oleracea HOM05D005963 ORTHO05D006869 2.4e-17 94.4 163 32.5
CARHR264680 Cardamine hirsuta HOM05D005963 ORTHO05D006869 3.1e-17 94.0 150 36.0
AT5G51800 Arabidopsis thaliana HOM05D005963 ORTHO05D006869 4.0e-17 93.6 157 33.8
ATR0661G117 Amborella trichopoda HOM05D005963 ORTHO05D006869 5.2e-17 93.2 428 22.9
arahy.Tifrunner.gnm1.ann1.R4K09I Arachis hypogaea HOM05D005963 ORTHO05D006869 6.8e-17 92.8 404 22.8
C02p20220 Brassica napus HOM05D005963 ORTHO05D006869 6.8e-17 92.8 148 33.8
A10p09630 Brassica napus HOM05D005963 ORTHO05D006869 8.9e-17 92.4 162 34.0
BolC9t56999H Brassica oleracea HOM05D005963 ORTHO05D006869 8.9e-17 92.4 162 34.0
BraA10t43044Z Brassica rapa HOM05D005963 ORTHO05D006869 8.9e-17 92.4 162 34.0
Nn6g34339 Nelumbo nucifera HOM05D005963 ORTHO05D006869 1.2e-16 92.0 376 23.4
Sp6g14050 Schrenkiella parvula HOM05D005963 ORTHO05D006869 2.0e-16 91.3 148 33.8
Dinv28513 Davidia involucrata HOM05D005963 ORTHO05D006869 5.8e-16 89.7 440 22.5
Duzib068G1175 Durio zibethinus HOM05D005963 ORTHO05D006869 5.8e-16 89.7 443 21.4
THA.LOC104825083 Tarenaya hassleriana HOM05D005963 ORTHO05D006869 5.8e-16 89.7 172 30.8
BcaC03g14575 Brassica carinata HOM05D005963 ORTHO05D006869 7.6e-16 89.4 148 33.1
Thhalv10015853m.g Eutrema salsugineum HOM05D005963 ORTHO05D006869 7.6e-16 89.4 148 33.8
Phvul.004G124000 Phaseolus vulgaris HOM05D005963 ORTHO05D006869 7.6e-16 89.4 369 24.7
GSVIVG01018456001 Vitis vinifera HOM05D005963 ORTHO05D006869 7.6e-16 89.4 458 22.3
A02p12120 Brassica napus HOM05D005963 ORTHO05D006869 9.9e-16 89.0 148 33.1
BraA02t06276Z Brassica rapa HOM05D005963 ORTHO05D006869 9.9e-16 89.0 148 33.1
HanXRQChr15g0486261 Helianthus annuus HOM05D005963 ORTHO05D006869 9.9e-16 89.0 200 31.5
Gorai.001G047400 Gossypium raimondii HOM05D005963 ORTHO05D006869 2.2e-15 87.8 393 23.2
Lj2g0022710 Lotus japonicus HOM05D005963 ORTHO05D006869 2.9e-15 87.4 387 22.5
MD00G1003400 Malus domestica HOM05D005963 ORTHO05D006869 2.9e-15 87.4 154 35.7
Aa31LG3G8240 Aethionema arabicum HOM05D005963 ORTHO05D006869 3.8e-15 87.0 374 24.3
Gohir.A07G040200 Gossypium hirsutum HOM05D005963 ORTHO05D006869 3.8e-15 87.0 393 22.6
Gohir.D07G044301 Gossypium hirsutum HOM05D005963 ORTHO05D006869 6.4e-15 86.3 393 22.9
Manes.06G140900 Manihot esculenta HOM05D005963 ORTHO05D006869 8.4e-15 85.9 161 31.7
SHI13839 Sapria himalayana HOM05D005963 ORTHO05D006869 8.4e-15 85.9 166 28.9
Aqoxy7G00515 Aquilegia oxysepala HOM05D005963 ORTHO05D006869 1.1e-14 85.5 389 23.7
Carub.0008s1182 Capsella rubella HOM05D005963 ORTHO05D006869 1.1e-14 85.5 148 33.8
ECA232G0907 Erigeron canadensis HOM05D005963 ORTHO05D006869 1.1e-14 85.5 202 30.7
Eucgr.K00183 Eucalyptus grandis HOM05D005963 ORTHO05D006869 1.9e-14 84.7 201 29.4
vmacro22547 Vaccinium macrocarpon HOM05D005963 ORTHO05D006869 1.9e-14 84.7 393 22.9
VMungo0464G1720 Vigna mungo HOM05D005963 ORTHO05D006869 1.9e-14 84.7 372 24.2
FAN03G0518 Fragaria x ananassa HOM05D005963 ORTHO05D006869 2.4e-14 84.3 394 22.8
Gohir.A12G262600 Gossypium hirsutum HOM05D005963 ORTHO05D006869 2.4e-14 84.3 366 23.8
SMO276G0013 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 2.4e-14 84.3 318 27.7
Duzib205G1443 Durio zibethinus HOM05D005963 ORTHO05D006869 5.4e-14 83.2 444 21.6
AL8G26090 Arabidopsis lyrata HOM05D005963 ORTHO05D006869 7.1e-14 82.8 150 32.7
ClCG05G007670 Citrullus lanatus HOM05D005963 ORTHO05D006869 7.1e-14 82.8 392 23.2
HanXRQChr14g0433491 Helianthus annuus HOM05D005963 ORTHO05D006869 7.1e-14 82.8 198 29.3
SMO116G0125 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 7.1e-14 82.8 203 30.0
Actinidia25056 Actinidia chinensis HOM05D005963 ORTHO05D006869 9.3e-14 82.4 367 22.6
Gohir.D12G263300 Gossypium hirsutum HOM05D005963 ORTHO05D006869 9.3e-14 82.4 362 24.3
CsaV3_3G016590 Cucumis sativus L. HOM05D005963 ORTHO05D006869 1.2e-13 82.0 175 30.9
BcaC04g20635 Brassica carinata HOM05D005963 ORTHO05D006869 1.6e-13 81.6 111 40.5
Gorai.008G282200 Gossypium raimondii HOM05D005963 ORTHO05D006869 1.6e-13 81.6 362 24.3
MD01G1192000 Malus domestica HOM05D005963 ORTHO05D006869 1.6e-13 81.6 155 34.2
BcaB08g35527 Brassica carinata HOM05D005963 ORTHO05D006869 2.1e-13 81.3 111 39.6
Nitab4.5_0000124g0020 Nicotiana tabacum HOM05D005963 ORTHO05D006869 2.1e-13 81.3 165 31.5
Haze_13797 Corylus avellana HOM05D005963 ORTHO05D006869 2.7e-13 80.9 156 30.1
MELO3C006856.2 Cucumis melo HOM05D005963 ORTHO05D006869 2.7e-13 80.9 175 29.1
Sed0018627 Sechium edule HOM05D005963 ORTHO05D006869 2.7e-13 80.9 163 35.6
Sc25g0000220 Simmondsia chinensis HOM05D005963 ORTHO05D006869 2.7e-13 80.9 223 25.6
Thecc.03G166100 Theobroma cacao HOM05D005963 ORTHO05D006869 2.7e-13 80.9 366 23.2
Oeu030146.1 Olea europaea HOM05D005963 ORTHO05D006869 3.5e-13 80.5 150 30.7
CiPaw.03G099400 Carya illinoinensis HOM05D005963 ORTHO05D006869 4.6e-13 80.1 150 30.0
FAN03G0902 Fragaria x ananassa HOM05D005963 ORTHO05D006869 4.6e-13 80.1 166 31.9
Hma1.2p1_0488F.1_g163860 Hydrangea macrophylla HOM05D005963 ORTHO05D006869 4.6e-13 80.1 174 30.5
Nitab4.5_0000371g0030 Nicotiana tabacum HOM05D005963 ORTHO05D006869 4.6e-13 80.1 165 31.5
Atru.chr1.580 Acer truncatum HOM05D005963 ORTHO05D006869 6.0e-13 79.7 173 31.8
CDE08G0260 Ceratophyllum demersum HOM05D005963 ORTHO05D006869 6.0e-13 79.7 364 22.8
FAN01G2646 Fragaria x ananassa HOM05D005963 ORTHO05D006869 6.0e-13 79.7 394 22.3
TPR.G26590 Trifolium pratense HOM05D005963 ORTHO05D006869 6.0e-13 79.7 374 23.8
Oeu030148.1 Olea europaea HOM05D005963 ORTHO05D006869 7.8e-13 79.3 150 30.7
CiPaw.04G064800 Carya illinoinensis HOM05D005963 ORTHO05D006869 1.0e-12 79.0 224 25.9
Lsat_1_v5_gn_9_53261 Lactuca sativa HOM05D005963 ORTHO05D006869 1.0e-12 79.0 192 29.7
Peaxi162Scf00192g00613 Petunia axillaris HOM05D005963 ORTHO05D006869 1.3e-12 78.6 169 29.6
Potri.012G132300 Populus trichocarpa HOM05D005963 ORTHO05D006869 1.7e-12 78.2 147 30.6
Sabra12G0099600 Salix brachista HOM05D005963 ORTHO05D006869 1.7e-12 78.2 175 29.7
Hund04676 Selenicereus undatus HOM05D005963 ORTHO05D006869 2.3e-12 77.8 400 23.0
Actinidia13537 Actinidia chinensis HOM05D005963 ORTHO05D006869 3.0e-12 77.4 393 23.2
COL.COLO4_14220 Corchorus olitorius HOM05D005963 ORTHO05D006869 3.9e-12 77.0 225 24.4
FAN06G2356 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.9e-12 77.0 155 32.3
FAN06G4856 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.9e-12 77.0 155 32.3
CAN.G1257.1 Capsicum annuum HOM05D005963 ORTHO05D006869 6.6e-12 76.3 150 30.0
Medtr0007s0220 Medicago truncatula HOM05D005963 ORTHO05D006869 6.6e-12 76.3 380 23.7
Psat1g106960 Pisum sativum HOM05D005963 ORTHO05D006869 6.6e-12 76.3 381 23.1
Dinv35132 Davidia involucrata HOM05D005963 ORTHO05D006869 8.7e-12 75.9 153 29.4
QL12p038851 Quercus lobata HOM05D005963 ORTHO05D006869 8.7e-12 75.9 150 29.3
RcHm_v2.0_Chr1g0376121 Rosa chinensis HOM05D005963 ORTHO05D006869 8.7e-12 75.9 159 33.3
Glyma.09G149700 Glycine max HOM05D005963 ORTHO05D006869 1.1e-11 75.5 198 27.8
TWI14G0479 Tripterygium wilfordii HOM05D005963 ORTHO05D006869 1.1e-11 75.5 151 29.1
Cc02_g03640 Coffea canephora HOM05D005963 ORTHO05D006869 1.5e-11 75.1 150 30.0
Solyc03g006900.2 Solanum lycopersicum HOM05D005963 ORTHO05D006869 1.5e-11 75.1 150 29.3
PGSC0003DMG400007557 Solanum tuberosum HOM05D005963 ORTHO05D006869 1.5e-11 75.1 150 29.3
Ciclev10004233m.g Citrus clementina HOM05D005963 ORTHO05D006869 1.9e-11 74.7 149 30.2
FvH4_7g28640 Fragaria vesca HOM05D005963 ORTHO05D006869 1.9e-11 74.7 155 31.6
Pp3c26_6220 Physcomitrium patens HOM05D005963 ORTHO05D006869 1.9e-11 74.7 103 39.8
PGR142G0011 Punica granatum HOM05D005963 ORTHO05D006869 1.9e-11 74.7 365 22.7
Rhsim03G0174100 Rhododendron simsii HOM05D005963 ORTHO05D006869 2.5e-11 74.3 168 28.0
CSS0028871 Camellia sinensis var. sinensis HOM05D005963 ORTHO05D006869 3.3e-11 73.9 146 30.1
Lj8C34G2 Lonicera japonica HOM05D005963 ORTHO05D006869 3.3e-11 73.9 176 32.4
Sopen03g002900 Solanum pennellii HOM05D005963 ORTHO05D006869 4.3e-11 73.6 150 28.7
Ah.13g067680 Amaranthus hybridus HOM05D005963 ORTHO05D006869 9.6e-11 72.4 192 28.1
Cpa.g.sc4.183 Carica papaya HOM05D005963 ORTHO05D006869 1.3e-10 72.0 149 29.5
AUR62016071 Chenopodium quinoa HOM05D005963 ORTHO05D006869 1.6e-10 71.6 192 27.1
MBI05_g12587_MAGBIO Magnolia biondii HOM05D005963 ORTHO05D006869 1.6e-10 71.6 147 31.3
EL10Ac3g05753 Beta vulgaris HOM05D005963 ORTHO05D006869 4.8e-10 70.1 192 26.6
SMO195G0003 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 6.2e-10 69.7 175 30.3
AUR62021279 Chenopodium quinoa HOM05D005963 ORTHO05D006869 8.1e-10 69.3 193 26.4
DCAR_018136 Daucus carota HOM05D005963 ORTHO05D006869 1.1e-09 68.9 190 26.8
SMO116G0123 Selaginella moellendorffii HOM05D005963 ORTHO05D006869 1.8e-09 68.2 169 29.6
EL10Ac7g16401 Beta vulgaris HOM05D005963 ORTHO05D006869 5.3e-09 66.6 393 21.4
SMO195G0004 Selaginella moellendorffii HOM05D025148 ORTHO05D050897 8.4e-07 59.3 66 47.0
PGSC0003DMG400007558 Solanum tuberosum HOM05D005963 ORTHO05D006869 1.1e-06 58.9 198 26.8
FAN10G3242 Fragaria x ananassa HOM05D005963 ORTHO05D006869 3.2e-06 57.4 81 35.8


User provided reference genes

Program Settings