Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 7.9e-163 577.0 286 100.0
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 3.8e-72 275.8 238 55.5
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 9.6e-68 261.2 232 54.3
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 2.0e-65 253.4 256 49.6
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 2.5e-63 246.5 238 49.6
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 5.5e-63 245.4 278 47.1
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 2.7e-62 243.0 238 51.7
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 3.5e-62 242.7 238 51.7
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 3.5e-62 242.7 256 47.7
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 4.6e-62 242.3 238 50.8
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 4.6e-62 242.3 238 51.7
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 4.6e-62 242.3 238 51.7
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 4.6e-62 242.3 238 51.7
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 4.6e-62 242.3 238 51.7
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 6.0e-62 241.9 253 47.8
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 7.9e-62 241.5 238 50.0
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.3e-61 240.7 257 47.5
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.3e-61 240.7 238 49.2
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.8e-61 240.4 238 48.7
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.8e-61 240.4 256 48.0
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 1.8e-61 240.4 238 49.6
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.3e-61 240.0 267 46.4
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 2.3e-61 240.0 245 48.2
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 2.3e-61 240.0 253 49.8
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 3.0e-61 239.6 257 47.9
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 3.0e-61 239.6 238 49.2
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 5.1e-61 238.8 238 49.6
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.1e-61 238.8 238 49.6
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 8.7e-61 238.0 238 47.9
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 8.7e-61 238.0 238 49.2
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.1e-60 237.7 259 47.5
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 1.1e-60 237.7 243 48.1
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.5e-60 237.3 244 48.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 1.5e-60 237.3 238 48.7
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 1.5e-60 237.3 257 49.4
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.9e-60 236.9 238 49.6
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 1.9e-60 236.9 238 48.7
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.5e-60 236.5 238 50.0
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 2.5e-60 236.5 253 48.2
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 2.5e-60 236.5 238 48.7
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.5e-60 236.5 257 47.1
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 2.5e-60 236.5 238 50.8
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 2.5e-60 236.5 266 46.2
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.5e-60 236.5 238 49.2
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 3.3e-60 236.1 238 48.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 3.3e-60 236.1 238 50.0
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 4.3e-60 235.7 253 48.6
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 4.3e-60 235.7 238 48.7
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 4.3e-60 235.7 238 48.7
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 4.3e-60 235.7 243 48.1
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 4.3e-60 235.7 257 48.2
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 4.3e-60 235.7 257 48.2
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.7e-60 235.3 238 48.7
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 5.7e-60 235.3 238 49.6
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 7.4e-60 235.0 238 49.6
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 9.6e-60 234.6 238 48.3
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 9.6e-60 234.6 253 48.6
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 9.6e-60 234.6 238 47.9
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 9.6e-60 234.6 238 47.9
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 9.6e-60 234.6 257 45.9
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 1.3e-59 234.2 253 48.2
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 1.3e-59 234.2 238 48.3
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.3e-59 234.2 238 48.3
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 1.3e-59 234.2 238 48.3
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.3e-59 234.2 238 48.3
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 1.6e-59 233.8 243 48.1
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 1.6e-59 233.8 257 46.3
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.1e-59 233.4 238 48.3
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 2.1e-59 233.4 238 50.0
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 2.1e-59 233.4 261 47.1
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 2.1e-59 233.4 257 45.9
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.8e-59 233.0 261 45.6
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 2.8e-59 233.0 260 46.9
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 3.7e-59 232.6 238 48.7
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 3.7e-59 232.6 241 46.9
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 4.8e-59 232.3 230 50.0
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 4.8e-59 232.3 238 47.5
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 6.3e-59 231.9 257 45.5
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 6.3e-59 231.9 256 44.9
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 6.3e-59 231.9 260 46.5
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 8.2e-59 231.5 273 43.2
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.1e-58 231.1 256 46.1
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 1.4e-58 230.7 216 50.0
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 1.4e-58 230.7 243 46.9
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 1.4e-58 230.7 243 46.9
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 1.4e-58 230.7 260 46.5
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 2.4e-58 229.9 255 45.9
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 4.1e-58 229.2 238 46.2
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 4.1e-58 229.2 238 48.3
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 6.9e-58 228.4 266 43.6
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 9.0e-58 228.0 260 45.4
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 1.2e-57 227.6 240 48.3
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 1.5e-57 227.3 238 46.6
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.5e-57 227.3 257 43.2
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 2.0e-57 226.9 236 48.3
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 3.4e-57 226.1 238 45.8
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.4e-57 226.1 271 44.6
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 7.6e-57 224.9 238 49.6
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 7.6e-57 224.9 226 48.2
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.3e-56 224.2 238 47.1
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 1.3e-56 224.2 248 48.0
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 2.9e-56 223.0 238 45.8
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 6.5e-56 221.9 248 46.8
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 1.1e-55 221.1 241 45.6
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 4.6e-54 215.7 245 47.3
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 7.9e-54 214.9 238 44.5
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 7.9e-54 214.9 238 45.0
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 1.5e-52 210.7 290 39.7
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.5e-52 210.7 328 37.5
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 5.5e-47 192.2 234 44.0
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 9.4e-47 191.4 229 43.7
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 4.6e-46 189.1 211 45.5
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 6.7e-45 185.3 257 40.1
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 8.8e-45 184.9 256 39.8
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 1.1e-44 184.5 240 42.5
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.4e-42 177.6 251 41.0
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 8.5e-40 168.3 256 37.9
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 2.6e-36 156.8 214 37.9
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 2.6e-36 156.8 178 42.1
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 2.8e-35 153.3 234 39.3
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 3.5e-33 146.4 212 39.2
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 2.5e-31 140.2 208 37.0
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.7e-28 129.0 120 48.3
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 5.7e-28 129.0 120 48.3
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 7.5e-28 128.6 172 41.3
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 4.8e-27 125.9 139 40.3
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.1e-26 122.9 139 46.8
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 2.0e-25 120.6 128 45.3
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 8.5e-24 115.2 107 54.2
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 8.5e-24 115.2 113 52.2
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 9.4e-23 111.7 113 48.7
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.7e-22 110.2 103 53.4
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 5.4e-18 95.9 85 47.1
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 1.2e-12 78.2 91 39.6
Atru.chr2.563 Acer truncatum HOM05D004866 ORTHO05D005716 2.9e-08 63.5 95 40.0
Atru.chr1.36 Acer truncatum HOM05D004896 ORTHO05D006447 1.9e-07 60.8 59 52.5
Atru.chr2.3725 Acer truncatum HOM05D004896 ORTHO05D006447 2.5e-07 60.5 62 51.6
Atru.chr11.190 Acer truncatum HOM05D004896 ORTHO05D006447 7.3e-07 58.9 59 50.8
Ah.07g205180 Amaranthus hybridus HOM05D004896 ORTHO05D060504 7.3e-07 58.9 75 40.0
CDE12G0511 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 7.3e-07 58.9 77 45.5
Atru.chr7.121 Acer truncatum HOM05D005216 ORTHO05D006453 2.8e-06 57.0 62 50.0


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