Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO171G0109 Selaginella moellendorffii HOM05D000821 ORTHO05D005255 7.9e-39 163.3 83 100.0
Duzib150G0377 Durio zibethinus HOM05D000821 ORTHO05D000931 2.5e-08 62.0 39 74.4
Thecc.09G155600 Theobroma cacao HOM05D000821 ORTHO05D005255 4.2e-08 61.2 40 70.0
Manes.14G114200 Manihot esculenta HOM05D000821 ORTHO05D005255 1.6e-07 59.3 40 67.5
TAR626G1302 Trochodendron aralioides HOM05D000821 ORTHO05D005255 2.7e-07 58.5 45 64.4
Nn2g12502 Nelumbo nucifera HOM05D000821 ORTHO05D005255 4.7e-07 57.8 44 63.6
TAR622G0438 Trochodendron aralioides HOM05D000821 ORTHO05D005255 4.7e-07 57.8 60 53.3
Ciclev10010716m.g Citrus clementina HOM05D000821 ORTHO05D005255 6.1e-07 57.4 41 61.0
Aqoxy7G03268 Aquilegia oxysepala HOM05D000821 ORTHO05D005255 8.0e-07 57.0 44 61.4
Cpa.g.sc718.1 Carica papaya HOM05D000821 ORTHO05D005255 8.0e-07 57.0 40 67.5
FAN07G0329 Fragaria x ananassa HOM05D000821 ORTHO05D005255 8.0e-07 57.0 76 46.1
FAN17G0115 Fragaria x ananassa HOM05D000821 ORTHO05D005255 8.0e-07 57.0 76 44.7
Nitab4.5_0001036g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 1.0e-06 56.6 32 78.1
PSO063G0195 Papaver somniferum HOM05D000821 ORTHO05D000931 1.0e-06 56.6 37 73.0
PSO782G4241 Papaver somniferum HOM05D000821 ORTHO05D000931 1.0e-06 56.6 37 73.0
MBI15_g07488_MAGBIO Magnolia biondii HOM05D000821 ORTHO05D005255 1.4e-06 56.2 44 63.6
Gohir.A05G007400 Gossypium hirsutum HOM05D000821 ORTHO05D005255 1.8e-06 55.8 31 80.6
Gohir.D05G008300 Gossypium hirsutum HOM05D000821 ORTHO05D005255 1.8e-06 55.8 31 80.6
Peaxi162Scf00026g00023 Petunia axillaris HOM05D000821 ORTHO05D000931 1.8e-06 55.8 45 55.6
Potri.018G101400 Populus trichocarpa HOM05D000821 ORTHO05D005255 1.8e-06 55.8 32 78.1
Rhsim01G0021000 Rhododendron simsii HOM05D000821 ORTHO05D005255 1.8e-06 55.8 31 80.6
TAR383G0646 Trochodendron aralioides HOM05D000821 ORTHO05D005255 1.8e-06 55.8 44 61.4
Ciclev10033607m.g Citrus clementina HOM05D000821 ORTHO05D000931 2.3e-06 55.5 43 65.1
DCAR_007213 Daucus carota HOM05D000821 ORTHO05D000931 2.3e-06 55.5 42 61.9
Nitab4.5_0000259g0260 Nicotiana tabacum HOM05D000821 ORTHO05D000931 2.3e-06 55.5 51 52.9
Thecc.04G145800 Theobroma cacao HOM05D000821 ORTHO05D000931 2.3e-06 55.5 44 65.9
Mapoly0001s0544 Marchantia polymorpha HOM05D000821 ORTHO05D005255 3.0e-06 55.1 39 64.1
Nn4g23620 Nelumbo nucifera HOM05D000821 ORTHO05D005255 3.0e-06 55.1 54 50.0
Nitab4.5_0022449g0010 Nicotiana tabacum HOM05D000821 ORTHO05D000931 3.0e-06 55.1 32 75.0
SalBow8G0588 Salvia bowleyana HOM05D000821 ORTHO05D000931 3.0e-06 55.1 52 59.6
SalBow8G4660 Salvia bowleyana HOM05D000821 ORTHO05D000931 3.0e-06 55.1 52 59.6
TWI34G0974 Tripterygium wilfordii HOM05D000821 ORTHO05D000931 3.0e-06 55.1 40 65.0
vmacro13068 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 3.0e-06 55.1 32 81.2
CiPaw.15G163200 Carya illinoinensis HOM05D000821 ORTHO05D005255 4.0e-06 54.7 40 65.0
CDE07G0496 Ceratophyllum demersum HOM05D000821 ORTHO05D005255 4.0e-06 54.7 37 67.6
Ca_02275_v3 Cicer arietinum L. HOM05D000821 ORTHO05D000931 5.2e-06 54.3 35 71.4
Manes.01G106700 Manihot esculenta HOM05D000821 ORTHO05D005255 5.2e-06 54.3 40 67.5
Medtr0076s0010 Medicago truncatula HOM05D000821 ORTHO05D005255 5.2e-06 54.3 33 75.8
Peaxi162Scf01056g00028 Petunia axillaris HOM05D000821 ORTHO05D000931 5.2e-06 54.3 44 56.8
SGA_v2.0_scaffold14G06782 Striga asiatica HOM05D000821 ORTHO05D005255 5.2e-06 54.3 44 59.1
vmacro18092 Vaccinium macrocarpon HOM05D000821 ORTHO05D005255 5.2e-06 54.3 85 45.9
HPP92_018539 Vanilla planifolia HOM05D000821 ORTHO05D005255 5.2e-06 54.3 44 56.8
MD09G1079900 Malus domestica HOM05D000821 ORTHO05D005255 6.8e-06 53.9 40 67.5
Solyc02g150147.1 Solanum lycopersicum HOM05D000821 ORTHO05D005255 6.8e-06 53.9 44 59.1
Ciclev10013834m.g Citrus clementina HOM05D000821 ORTHO05D005255 8.8e-06 53.5 44 59.1
Haze_19064 Corylus avellana HOM05D000821 ORTHO05D005255 8.8e-06 53.5 40 65.0
Haze_19070 Corylus avellana HOM05D000821 ORTHO05D005255 8.8e-06 53.5 40 65.0
Migut.L01129 Erythranthe guttata HOM05D000821 ORTHO05D005255 8.8e-06 53.5 44 61.4
Lalb_Chr21g0318051 Lupinus albus HOM05D000821 ORTHO05D005255 8.8e-06 53.5 48 54.2
Nitab4.5_0001965g0070 Nicotiana tabacum HOM05D000821 ORTHO05D000931 8.8e-06 53.5 45 51.1
Oeu027423.1 Olea europaea HOM05D000821 ORTHO05D005255 8.8e-06 53.5 43 58.1
Sabra17G0091400 Salix brachista HOM05D000821 ORTHO05D005255 8.8e-06 53.5 50 56.0


User provided reference genes

Program Settings