Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO165G0131 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 6.5e-190 667.2 319 100.0
SMO272G0021 Selaginella moellendorffii HOM05D006689 ORTHO05D008349 6.8e-155 550.8 310 87.7
SEGI_26711 Sequoiadendron giganteum HOM05D006689 ORTHO05D008349 6.5e-73 278.5 309 44.7
Potri.016G072700 Populus trichocarpa HOM05D006689 ORTHO05D008349 1.4e-72 277.3 308 44.2
Eucgr.A02606 Eucalyptus grandis HOM05D006689 ORTHO05D008349 5.5e-72 275.4 308 43.8
Pp3c13_7330 Physcomitrium patens HOM05D006689 ORTHO05D008349 7.2e-72 275.0 309 44.3
PGR004G2039 Punica granatum HOM05D006689 ORTHO05D008349 5.1e-70 268.9 305 41.0
BcaB04g18654 Brassica carinata HOM05D006689 ORTHO05D008349 6.7e-70 268.5 309 43.4
Sp3g09850 Schrenkiella parvula HOM05D006689 ORTHO05D008349 6.7e-70 268.5 313 42.5
BcaC01g04099 Brassica carinata HOM05D006689 ORTHO05D008349 1.1e-69 267.7 306 43.5
C03p45070 Brassica napus HOM05D006689 ORTHO05D008349 2.0e-69 266.9 306 42.8
CARHR086170 Cardamine hirsuta HOM05D006689 ORTHO05D008349 2.0e-69 266.9 313 42.8
Thhalv10021180m.g Eutrema salsugineum HOM05D006689 ORTHO05D008349 2.0e-69 266.9 309 43.4
TAR633G1471 Trochodendron aralioides HOM05D006689 ORTHO05D008349 2.6e-69 266.5 311 43.1
A03p37220 Brassica napus HOM05D006689 ORTHO05D008349 3.3e-69 266.2 306 43.5
C05p56320 Brassica napus HOM05D006689 ORTHO05D008349 4.4e-69 265.8 307 42.7
Solyc01g007790.4 Solanum lycopersicum HOM05D006689 ORTHO05D008349 5.7e-69 265.4 311 42.1
GSVIVG01033928001 Vitis vinifera HOM05D006689 ORTHO05D008349 9.7e-69 264.6 308 41.2
BolC5t34296H Brassica oleracea HOM05D006689 ORTHO05D008349 1.7e-68 263.8 298 43.3
Sopen01g003330 Solanum pennellii HOM05D006689 ORTHO05D008349 2.2e-68 263.5 311 42.1
Lalb_Chr20g0111471 Lupinus albus HOM05D006689 ORTHO05D008349 2.8e-68 263.1 304 41.8
Lalb_Chr01g0017911 Lupinus albus HOM05D006689 ORTHO05D008349 3.7e-68 262.7 309 42.4
Zm00001eb362600 Zea mays HOM05D006689 ORTHO05D008349 4.8e-68 262.3 311 43.7
HPP92_023075 Vanilla planifolia HOM05D006689 ORTHO05D008349 8.2e-68 261.5 310 41.9
MD14G1035800 Malus domestica HOM05D006689 ORTHO05D008349 1.1e-67 261.2 311 40.8
CSS0035173 Camellia sinensis var. sinensis HOM05D006689 ORTHO05D008349 1.4e-67 260.8 308 42.2
Hma1.2p1_0064F.1_g034840 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 1.4e-67 260.8 305 43.0
BraA03t12881Z Brassica rapa HOM05D006689 ORTHO05D008349 1.8e-67 260.4 307 43.0
A05p37720 Brassica napus HOM05D006689 ORTHO05D008349 4.1e-67 259.2 307 41.7
BraA05t22567Z Brassica rapa HOM05D006689 ORTHO05D008349 4.1e-67 259.2 308 42.2
Sc07g0005680 Simmondsia chinensis HOM05D006689 ORTHO05D008349 7.0e-67 258.5 309 41.7
AL3G23170 Arabidopsis lyrata HOM05D006689 ORTHO05D008349 9.1e-67 258.1 309 41.7
TWI74G1155 Tripterygium wilfordii HOM05D006689 ORTHO05D008349 1.2e-66 257.7 308 40.9
Aa31LG3G5030 Aethionema arabicum HOM05D006689 ORTHO05D008349 3.5e-66 256.1 313 41.2
Cc06_g06350 Coffea canephora HOM05D006689 ORTHO05D008349 7.7e-66 255.0 308 41.2
AT3G11620 Arabidopsis thaliana HOM05D006689 ORTHO05D008349 1.7e-65 253.8 298 42.3
Carub.0003s1094 Capsella rubella HOM05D006689 ORTHO05D008349 2.2e-65 253.4 309 41.1
CANSAT64G2446 Cannabis sativa HOM05D006689 ORTHO05D008349 2.9e-65 253.1 312 40.4
Psat3g030240 Pisum sativum HOM05D006689 ORTHO05D008349 2.9e-65 253.1 304 39.8
FvH4_6g19910 Fragaria vesca HOM05D006689 ORTHO05D008349 6.5e-65 251.9 308 39.3
Lj1g0003895 Lotus japonicus HOM05D006689 ORTHO05D008349 1.1e-64 251.1 304 39.8
Oeu017715.1 Olea europaea HOM05D006689 ORTHO05D008349 1.5e-64 250.8 319 40.1
Prupe.7G098300 Prunus persica HOM05D006689 ORTHO05D008349 2.5e-64 250.0 311 39.2
Actinidia32058 Actinidia chinensis HOM05D006689 ORTHO05D008349 3.2e-64 249.6 308 40.3
QL07p037513 Quercus lobata HOM05D006689 ORTHO05D008349 3.2e-64 249.6 305 37.7
HanXRQChr13g0398201 Helianthus annuus HOM05D006689 ORTHO05D008349 7.2e-64 248.4 305 40.3
Aqoxy4G02685 Aquilegia oxysepala HOM05D006689 ORTHO05D008349 9.4e-64 248.1 314 38.9
Nn6g34760 Nelumbo nucifera HOM05D006689 ORTHO05D008349 1.6e-63 247.3 303 40.9
BcaC05g29349 Brassica carinata HOM05D006689 ORTHO05D008349 2.7e-63 246.5 288 42.0
DCAR_013430 Daucus carota HOM05D006689 ORTHO05D008349 1.0e-62 244.6 312 40.1
CiPaw.09G018700 Carya illinoinensis HOM05D006689 ORTHO05D008349 1.8e-62 243.8 311 38.9
PSO384G4437 Papaver somniferum HOM05D006689 ORTHO05D008349 8.8e-62 241.5 311 37.9
PSO339G4581 Papaver somniferum HOM05D006689 ORTHO05D008349 1.1e-61 241.1 311 37.6
Atru.chr8.1397 Acer truncatum HOM05D006689 ORTHO05D008349 2.0e-61 240.4 308 38.3
Gorai.009G398000 Gossypium raimondii HOM05D006689 ORTHO05D008349 2.6e-61 240.0 304 40.1
Duzib106G1273 Durio zibethinus HOM05D006689 ORTHO05D008349 7.5e-61 238.4 308 39.3
CsaV3_6G040970 Cucumis sativus L. HOM05D006689 ORTHO05D008349 1.3e-60 237.7 309 37.2
TPR.G23318 Trifolium pratense HOM05D006689 ORTHO05D008349 1.3e-60 237.7 304 39.1
BcaB06g25602 Brassica carinata HOM05D006689 ORTHO05D008349 4.8e-60 235.7 313 39.6
ATR0772G132 Amborella trichopoda HOM05D006689 ORTHO05D008349 1.1e-59 234.6 272 44.5
Cpa.g.sc104.62 Carica papaya HOM05D006689 ORTHO05D008349 3.1e-59 233.0 309 38.5
ECA233G1524 Erigeron canadensis HOM05D006689 ORTHO05D008349 3.1e-59 233.0 296 37.5
FAN05G1672 Fragaria x ananassa HOM05D006689 ORTHO05D008349 4.1e-59 232.6 308 37.7
QL07p037495 Quercus lobata HOM05D006689 ORTHO05D008349 1.6e-58 230.7 308 36.7
MBI17_g00993_MAGBIO Magnolia biondii HOM05D006689 ORTHO05D008349 5.9e-58 228.8 302 38.7
Lsat_1_v5_gn_6_35180 Lactuca sativa HOM05D006689 ORTHO05D008349 1.0e-57 228.0 296 37.8
FAN02G4476 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.2e-57 226.9 308 37.3
FAN14G3242 Fragaria x ananassa HOM05D006689 ORTHO05D008349 2.9e-57 226.5 308 37.0
Cfa016668 Carpinus fangiana HOM05D006689 ORTHO05D008349 5.0e-57 225.7 313 36.4
MD12G1034600 Malus domestica HOM05D006689 ORTHO05D008349 5.5e-56 222.2 299 37.1
Nitab4.5_0000665g0040 Nicotiana tabacum HOM05D006689 ORTHO05D008349 5.5e-56 222.2 308 39.3
Phvul.001G194040 Phaseolus vulgaris HOM05D006689 ORTHO05D008349 5.5e-56 222.2 268 41.4
Ciclev10011965m.g Citrus clementina HOM05D006689 ORTHO05D008349 1.6e-55 220.7 323 37.2
arahy.Tifrunner.gnm1.ann1.YAPI8V Arachis hypogaea HOM05D006689 ORTHO05D008349 8.0e-55 218.4 308 37.0
Peaxi162Scf00419g00069 Petunia axillaris HOM05D006689 ORTHO05D008349 6.8e-54 215.3 304 37.8
arahy.Tifrunner.gnm1.ann1.ZIE5B9 Arachis hypogaea HOM05D006689 ORTHO05D008349 1.3e-52 211.1 304 36.5
Sed0011891 Sechium edule HOM05D006689 ORTHO05D008349 2.8e-52 209.9 281 37.0
RcHm_v2.0_Chr3g0475311 Rosa chinensis HOM05D006689 ORTHO05D008349 1.4e-51 207.6 253 39.1
ClCG04G010350 Citrullus lanatus HOM05D006689 ORTHO05D008349 1.0e-49 201.4 309 33.7
FAN05G0890 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.5e-48 197.6 267 36.7
Medtr7g105800 Medicago truncatula HOM05D006689 ORTHO05D008349 2.5e-48 196.8 248 39.1
Nitab4.5_0000020g0370 Nicotiana tabacum HOM05D006689 ORTHO05D008349 2.5e-48 196.8 249 41.4
Manes.09G048600 Manihot esculenta HOM05D006689 ORTHO05D008349 3.2e-48 196.4 200 48.5
FAN09G0196 Fragaria x ananassa HOM05D006689 ORTHO05D008349 1.0e-46 191.4 400 28.8
Hma1.2p1_0064F.1_g034850 Hydrangea macrophylla HOM05D006689 ORTHO05D008349 8.8e-46 188.3 197 46.7
Rhsim03G0067100 Rhododendron simsii HOM05D006689 ORTHO05D008349 1.2e-45 188.0 447 28.4
Sabra16G0075500 Salix brachista HOM05D006689 ORTHO05D008349 2.6e-45 186.8 349 32.4
Migut.L01819 Erythranthe guttata HOM05D006689 ORTHO05D008349 3.4e-45 186.4 245 37.6
Gohir.D04G095300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 3.4e-45 186.4 248 38.7
CAN.G574.36 Capsicum annuum HOM05D006689 ORTHO05D008349 1.2e-42 177.9 226 41.2
Haze_19679 Corylus avellana HOM05D006689 ORTHO05D008349 1.5e-40 171.0 350 30.0
SalBow5G2063 Salvia bowleyana HOM05D006689 ORTHO05D008349 1.8e-38 164.1 308 32.1
AUR62037035 Chenopodium quinoa HOM05D006689 ORTHO05D008349 7.5e-37 158.7 217 40.1
Thecc.05G100700 Theobroma cacao HOM05D006689 ORTHO05D008349 7.5e-37 158.7 196 41.8
AUR62006266 Chenopodium quinoa HOM05D006689 ORTHO05D008349 1.6e-34 151.0 217 38.7
CDE02G4301 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.3e-33 147.1 185 39.5
Hund19873 Selenicereus undatus HOM05D006689 ORTHO05D008349 1.3e-28 131.3 293 30.4
PGSC0003DMG400016416 Solanum tuberosum HOM05D006689 ORTHO05D008349 2.2e-28 130.6 165 39.4
Gohir.A04G061585 Gossypium hirsutum HOM05D006689 ORTHO05D008349 5.4e-27 125.9 121 49.6
EL10Ac7g16816 Beta vulgaris HOM05D006689 ORTHO05D008349 5.6e-24 115.9 161 36.0
Glyma.03G200300 Glycine max HOM05D006689 ORTHO05D008349 2.1e-23 114.0 156 36.5
vmacro07460 Vaccinium macrocarpon HOM05D006689 ORTHO05D008349 4.7e-23 112.8 133 40.6
BolC3t16769H Brassica oleracea HOM05D006689 ORTHO05D008349 8.1e-23 112.1 138 39.9
Glyma.19G197900 Glycine max HOM05D006689 ORTHO05D008349 1.4e-22 111.3 301 24.9
unitig_22.g6018 Utricularia gibba HOM05D006689 ORTHO05D008349 2.6e-21 107.1 204 29.4
MCO04G525 Micromonas commoda HOM05D006689 ORTHO05D008349 5.8e-21 105.9 284 27.1
MELO3C024575.2 Cucumis melo HOM05D006689 ORTHO05D008349 7.5e-21 105.5 319 25.7
Gohir.A04G061300 Gossypium hirsutum HOM05D006689 ORTHO05D008349 1.3e-17 94.7 78 48.7
Ah.08g210180 Amaranthus hybridus HOM05D006689 ORTHO05D008349 1.7e-17 94.4 94 46.8
COL.COLO4_29616 Corchorus olitorius HOM05D006689 ORTHO05D008349 1.7e-17 94.4 77 46.8
Aa31LG3G5020 Aethionema arabicum HOM05D006689 ORTHO05D008349 6.6e-17 92.4 76 51.3
PRCOL_00001274 Prasinoderma coloniale HOM05D006689 ORTHO05D008349 1.5e-16 91.3 254 26.8
Actinidia03903 Actinidia chinensis HOM05D006689 ORTHO05D008349 2.5e-16 90.5 148 37.2
CDE02G1185 Ceratophyllum demersum HOM05D006689 ORTHO05D008349 2.8e-15 87.0 86 46.5
SGA_v2.0_scaffold184G40008 Striga asiatica HOM05D006689 ORTHO05D008349 1.3e-12 78.2 89 40.4
Cre09.g388319 Chlamydomonas reinhardtii HOM05D006689 ORTHO05D008349 1.6e-10 71.2 114 36.8
RcHm_v2.0_Chr3g0475321 Rosa chinensis HOM05D006689 ORTHO05D008349 8.9e-06 55.5 56 42.9


User provided reference genes

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