Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO146G0138 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 3.0e-95 352.1 204 100.0
CsaV3_5G026740 Cucumis sativus L. HOM05D004280 ORTHO05D005059 1.1e-49 200.7 154 64.9
FvH4_3g45340 Fragaria vesca HOM05D004280 ORTHO05D005059 3.2e-49 199.1 152 67.1
MELO3C021620.2 Cucumis melo HOM05D004280 ORTHO05D005059 7.1e-49 198.0 154 64.3
Hma1.2p1_0843F.1_g227335 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 2.1e-48 196.4 154 64.3
Hma1.2p1_0843F.1_g227340 Hydrangea macrophylla HOM05D004280 ORTHO05D005059 2.1e-48 196.4 154 64.3
FAN25G1542 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.7e-48 196.1 150 66.7
Sed0023881 Sechium edule HOM05D004280 ORTHO05D005059 2.7e-48 196.1 150 64.7
Prupe.6G007100 Prunus persica HOM05D004280 ORTHO05D005059 4.6e-48 195.3 196 55.1
FAN11G0747 Fragaria x ananassa HOM05D004280 ORTHO05D005059 7.9e-48 194.5 150 66.7
Nn7g35895 Nelumbo nucifera HOM05D004280 ORTHO05D005059 7.9e-48 194.5 152 62.5
SEGI_26181 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 1.0e-47 194.1 154 61.0
CSS0019544 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 1.3e-47 193.7 205 52.2
Duzib170G0536 Durio zibethinus HOM05D004280 ORTHO05D005059 1.8e-47 193.4 152 62.5
TAR623G1159 Trochodendron aralioides HOM05D004280 ORTHO05D005059 1.8e-47 193.4 150 65.3
MD03G1005700 Malus domestica HOM05D004280 ORTHO05D005059 2.3e-47 193.0 149 65.1
MD11G1008600 Malus domestica HOM05D004280 ORTHO05D005059 2.3e-47 193.0 149 64.4
RcHm_v2.0_Chr4g0431981 Rosa chinensis HOM05D004280 ORTHO05D005059 2.3e-47 193.0 144 68.8
RcHm_v2.0_Chr5g0083141 Rosa chinensis HOM05D004280 ORTHO05D005059 2.3e-47 193.0 144 68.8
CSS0019811 Camellia sinensis var. sinensis HOM05D004280 ORTHO05D005059 3.0e-47 192.6 146 64.4
CANSAT01G2556 Cannabis sativa HOM05D004280 ORTHO05D005059 3.9e-47 192.2 157 61.1
Solyc04g076580.4 Solanum lycopersicum HOM05D004280 ORTHO05D005059 3.9e-47 192.2 152 61.2
Pp3c14_18710 Physcomitrium patens HOM05D004280 ORTHO05D005059 6.7e-47 191.4 154 63.6
Atru.chr1.3614 Acer truncatum HOM05D004280 ORTHO05D005059 8.7e-47 191.0 152 63.2
Peaxi162Scf01112g00112 Petunia axillaris HOM05D004280 ORTHO05D005059 1.1e-46 190.7 150 62.0
Gohir.D08G021800 Gossypium hirsutum HOM05D004280 ORTHO05D005059 1.5e-46 190.3 152 60.5
Mapoly0011s0044 Marchantia polymorpha HOM05D004280 ORTHO05D005059 1.5e-46 190.3 150 62.0
Rhsim09G0027500 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.9e-46 189.9 151 62.9
RhsimUnG0194900 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.9e-46 189.9 151 62.9
Thecc.09G208500 Theobroma cacao HOM05D004280 ORTHO05D005059 1.9e-46 189.9 151 61.6
Aqoxy7G03617 Aquilegia oxysepala HOM05D004280 ORTHO05D005059 2.5e-46 189.5 151 62.9
Gorai.004G017100 Gossypium raimondii HOM05D004280 ORTHO05D005059 2.5e-46 189.5 150 60.7
Dinv23876 Davidia involucrata HOM05D004280 ORTHO05D005059 3.3e-46 189.1 153 61.4
Gohir.A08G011300 Gossypium hirsutum HOM05D004280 ORTHO05D005059 3.3e-46 189.1 152 59.9
AagrBONN_evm.TU.Sc2ySwM_344.2640 Anthoceros agrestis HOM05D004280 ORTHO05D005059 4.3e-46 188.7 154 59.7
CAN.G193.6 Capsicum annuum HOM05D004280 ORTHO05D005059 4.3e-46 188.7 149 60.4
ClCG09G019650 Citrullus lanatus HOM05D004280 ORTHO05D005059 4.3e-46 188.7 165 58.8
Ciclev10016632m.g Citrus clementina HOM05D004280 ORTHO05D005059 4.3e-46 188.7 154 63.6
ECA248G0362 Erigeron canadensis HOM05D004280 ORTHO05D005059 4.3e-46 188.7 150 61.3
Lsat_1_v5_gn_1_67700 Lactuca sativa HOM05D004280 ORTHO05D005059 4.3e-46 188.7 151 60.9
GSVIVG01025433001 Vitis vinifera HOM05D004280 ORTHO05D005059 4.3e-46 188.7 147 63.3
Glyma.06G309800 Glycine max HOM05D004280 ORTHO05D005059 5.7e-46 188.3 155 60.6
Glyma.14G130400 Glycine max HOM05D004280 ORTHO05D005059 5.7e-46 188.3 155 60.6
SGA_v2.0_scaffold13G06338 Striga asiatica HOM05D004280 ORTHO05D005059 7.4e-46 188.0 149 61.1
COL.COLO4_35029 Corchorus olitorius HOM05D004280 ORTHO05D005059 9.6e-46 187.6 152 61.8
FAN16G1471 Fragaria x ananassa HOM05D004280 ORTHO05D005059 1.3e-45 187.2 150 64.0
PGSC0003DMG401025662 Solanum tuberosum HOM05D004280 ORTHO05D005059 1.3e-45 187.2 148 60.1
vmacro00623 Vaccinium macrocarpon HOM05D004280 ORTHO05D005059 1.6e-45 186.8 152 61.2
Glyma.14G154000 Glycine max HOM05D004280 ORTHO05D005059 2.1e-45 186.4 155 60.0
Lj2A726G7 Lonicera japonica HOM05D004280 ORTHO05D005059 2.1e-45 186.4 150 61.3
PGR102G2828 Punica granatum HOM05D004280 ORTHO05D005059 2.1e-45 186.4 154 59.1
Sc10g0001010 Simmondsia chinensis HOM05D004280 ORTHO05D005059 2.1e-45 186.4 142 62.0
SalBow6G7108 Salvia bowleyana HOM05D004280 ORTHO05D005059 2.8e-45 186.0 154 60.4
Cc05_g01230 Coffea canephora HOM05D004280 ORTHO05D005059 3.7e-45 185.7 151 61.6
DCAR_009024 Daucus carota HOM05D004280 ORTHO05D005059 3.7e-45 185.7 145 64.1
Manes.04G095700 Manihot esculenta HOM05D004280 ORTHO05D005059 3.7e-45 185.7 154 59.7
Potri.001G006300 Populus trichocarpa HOM05D004280 ORTHO05D005059 4.8e-45 185.3 154 59.1
Cc01_g00630 Coffea canephora HOM05D004280 ORTHO05D005059 6.3e-45 184.9 151 60.9
Duzib150G0115 Durio zibethinus HOM05D004280 ORTHO05D005059 8.2e-45 184.5 152 59.9
ECA233G4188 Erigeron canadensis HOM05D004280 ORTHO05D005059 8.2e-45 184.5 152 59.9
Manes.01G036600 Manihot esculenta HOM05D004280 ORTHO05D005059 8.2e-45 184.5 205 51.7
Phvul.001G056600 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 1.1e-44 184.1 155 58.7
SMO169G0010 Selaginella moellendorffii HOM05D004280 ORTHO05D005059 1.1e-44 184.1 151 63.6
Rhsim02G0077200 Rhododendron simsii HOM05D004280 ORTHO05D005059 1.4e-44 183.7 152 61.2
Glyma.11G173655 Glycine max HOM05D004280 ORTHO05D005059 1.8e-44 183.3 156 60.3
Cpa.g.sc119.63 Carica papaya HOM05D004280 ORTHO05D005059 2.4e-44 183.0 154 59.7
FAN21G3004 Fragaria x ananassa HOM05D004280 ORTHO05D005059 2.4e-44 183.0 141 66.7
Migut.D02547 Erythranthe guttata HOM05D004280 ORTHO05D005059 3.1e-44 182.6 204 50.0
QL01p008475 Quercus lobata HOM05D004280 ORTHO05D005059 3.1e-44 182.6 152 59.2
Thhalv10011786m.g Eutrema salsugineum HOM05D004280 ORTHO05D005059 5.3e-44 181.8 149 59.7
AT1G55300 Arabidopsis thaliana HOM05D004280 ORTHO05D005059 6.9e-44 181.4 148 60.8
BcaB02g10831 Brassica carinata HOM05D004280 ORTHO05D005059 6.9e-44 181.4 144 61.8
Lj6g0003060 Lotus japonicus HOM05D004280 ORTHO05D005059 6.9e-44 181.4 155 59.4
unitig_749.g13584 Utricularia gibba HOM05D004280 ORTHO05D005059 6.9e-44 181.4 150 59.3
MSTRG.18872 Avicennia marina HOM05D004280 ORTHO05D005059 9.0e-44 181.0 206 50.0
Carub.0001s4380 Capsella rubella HOM05D004280 ORTHO05D005059 9.0e-44 181.0 149 59.7
MBI05_g32463_MAGBIO Magnolia biondii HOM05D004280 ORTHO05D005059 9.0e-44 181.0 150 60.0
Sabra01G0004700 Salix brachista HOM05D004280 ORTHO05D005059 9.0e-44 181.0 150 58.7
THA.LOC104822674 Tarenaya hassleriana HOM05D004280 ORTHO05D005059 9.0e-44 181.0 149 57.7
ATR0681G021 Amborella trichopoda HOM05D004280 ORTHO05D005059 1.2e-43 180.6 150 59.3
CiPaw.13G175600 Carya illinoinensis HOM05D004280 ORTHO05D005059 1.2e-43 180.6 156 59.6
HanXRQChr13g0405321 Helianthus annuus HOM05D004280 ORTHO05D005059 1.2e-43 180.6 148 60.1
Medtr3g083880 Medicago truncatula HOM05D004280 ORTHO05D005059 1.5e-43 180.3 151 58.3
Sabra03G0163100 Salix brachista HOM05D004280 ORTHO05D005059 1.5e-43 180.3 150 60.0
PSO210G5203 Papaver somniferum HOM05D004280 ORTHO05D005059 2.0e-43 179.9 154 60.4
PSO761G0405 Papaver somniferum HOM05D004280 ORTHO05D005059 2.0e-43 179.9 154 60.4
arahy.Tifrunner.gnm1.ann1.0AF3IJ Arachis hypogaea HOM05D004280 ORTHO05D005059 2.6e-43 179.5 153 58.2
BolC6t36098H Brassica oleracea HOM05D004280 ORTHO05D005059 2.6e-43 179.5 148 60.1
CiPaw.16G086400 Carya illinoinensis HOM05D004280 ORTHO05D005059 2.6e-43 179.5 156 59.6
C06p15910 Brassica napus HOM05D004280 ORTHO05D005059 3.4e-43 179.1 144 61.1
CARHR044950 Cardamine hirsuta HOM05D004280 ORTHO05D005059 3.4e-43 179.1 149 59.1
Haze_22956 Corylus avellana HOM05D004280 ORTHO05D005059 3.4e-43 179.1 152 59.2
Haze_22962 Corylus avellana HOM05D004280 ORTHO05D005059 3.4e-43 179.1 152 59.2
BolC6t36783H Brassica oleracea HOM05D004280 ORTHO05D005059 4.5e-43 178.7 150 58.7
TWI60G1521 Tripterygium wilfordii HOM05D004280 ORTHO05D005059 4.5e-43 178.7 206 49.0
Pp3c1_41986 Physcomitrium patens HOM05D004280 ORTHO05D005059 5.9e-43 178.3 148 62.2
C06p10250 Brassica napus HOM05D004280 ORTHO05D005059 7.6e-43 177.9 144 61.1
Potri.003G218700 Populus trichocarpa HOM05D004280 ORTHO05D005059 7.6e-43 177.9 154 58.4
Aa31LG10G1060 Aethionema arabicum HOM05D004280 ORTHO05D005059 1.0e-42 177.6 149 59.7
BcaC08g44186 Brassica carinata HOM05D004280 ORTHO05D005059 1.0e-42 177.6 144 60.4
A06p00280 Brassica napus HOM05D004280 ORTHO05D005059 1.0e-42 177.6 144 61.1
BraA06t23245Z Brassica rapa HOM05D004280 ORTHO05D005059 1.0e-42 177.6 144 61.1
HPP92_017297 Vanilla planifolia HOM05D004280 ORTHO05D005059 1.0e-42 177.6 148 56.8
SEGI_04342 Sequoiadendron giganteum HOM05D004280 ORTHO05D005059 1.3e-42 177.2 154 56.5
BraA05t20650Z Brassica rapa HOM05D004280 ORTHO05D005059 2.2e-42 176.4 144 59.7
Hund03769 Selenicereus undatus HOM05D004280 ORTHO05D005059 3.8e-42 175.6 153 60.1
VMungo0647G2277 Vigna mungo HOM05D004280 ORTHO05D005059 3.8e-42 175.6 146 60.3
CBR_g22380 Chara braunii HOM05D004280 ORTHO05D005059 5.0e-42 175.3 154 55.8
Sp1g40960 Schrenkiella parvula HOM05D004280 ORTHO05D005059 5.0e-42 175.3 149 57.7
TPR.G24159 Trifolium pratense HOM05D004280 ORTHO05D005059 5.0e-42 175.3 151 57.6
SGA_v2.0_scaffold329G48825 Striga asiatica HOM05D004280 ORTHO05D005059 6.5e-42 174.9 140 61.4
SGA_v2.0_scaffold552G52891 Striga asiatica HOM05D004280 ORTHO05D005059 6.5e-42 174.9 140 61.4
SGA_v2.0_scaffold693G53465 Striga asiatica HOM05D004280 ORTHO05D005059 6.5e-42 174.9 140 61.4
SalBow4G3146 Salvia bowleyana HOM05D004280 ORTHO05D005059 2.5e-41 172.9 166 54.2
SGA_v2.0_scaffold738G53541 Striga asiatica HOM05D004280 ORTHO05D005059 2.5e-41 172.9 140 60.7
Psat5g102320 Pisum sativum HOM05D004280 ORTHO05D005059 3.2e-41 172.6 156 55.8
Eucgr.B03612 Eucalyptus grandis HOM05D004280 ORTHO05D005059 4.2e-41 172.2 150 58.0
A05p17570 Brassica napus HOM05D004280 ORTHO05D005059 7.2e-41 171.4 144 59.0
Ah.04g157750 Amaranthus hybridus HOM05D004280 ORTHO05D005059 9.3e-41 171.0 150 60.0
Ca_16394_v3 Cicer arietinum L. HOM05D004280 ORTHO05D005059 2.1e-40 169.9 206 46.6
Ah.04g157660 Amaranthus hybridus HOM05D004280 ORTHO05D005059 3.6e-40 169.1 150 59.3
Os05g0347000 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 1.0e-39 167.5 147 57.8
SGA_v2.0_scaffold521G52700 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-39 167.2 156 55.8
SGA_v2.0_scaffold674G53431 Striga asiatica HOM05D004280 ORTHO05D005059 1.3e-39 167.2 156 55.8
Lalb_Chr08g0230321 Lupinus albus HOM05D004280 ORTHO05D005059 3.0e-39 166.0 162 53.1
Zm00001eb233380 Zea mays HOM05D004280 ORTHO05D005059 7.4e-38 161.4 210 45.7
SGA_v2.0_scaffold674G53436 Striga asiatica HOM05D004280 ORTHO05D005059 9.7e-38 161.0 156 54.5
Zm00001eb059570 Zea mays HOM05D004280 ORTHO05D005059 9.7e-38 161.0 150 56.7
Zm00001eb395740 Zea mays HOM05D004280 ORTHO05D005059 3.7e-37 159.1 151 53.6
Lsat_1_v5_gn_6_54260 Lactuca sativa HOM05D004280 ORTHO05D005059 4.8e-37 158.7 152 53.9
AUR62032745 Chenopodium quinoa HOM05D004280 ORTHO05D005059 1.8e-36 156.8 127 60.6
HanXRQChr01g0021661 Helianthus annuus HOM05D004280 ORTHO05D005059 1.8e-36 156.8 123 62.6
AUR62015306 Chenopodium quinoa HOM05D004280 ORTHO05D005059 5.3e-36 155.2 125 60.8
Oeu059672.2 Olea europaea HOM05D004280 ORTHO05D005059 6.9e-36 154.8 132 58.3
PGSC0003DMG400009351 Solanum tuberosum HOM05D004280 ORTHO05D005059 4.5e-35 152.1 122 60.7
SGA_v2.0_scaffold2280G54098 Striga asiatica HOM05D004280 ORTHO05D005059 1.9e-33 146.7 111 63.1
Zm00001eb068820 Zea mays HOM05D004280 ORTHO05D005059 1.9e-33 146.7 145 55.2
Cc01_g02840 Coffea canephora HOM05D004280 ORTHO05D005059 2.5e-33 146.4 151 53.6
Sed0016974 Sechium edule HOM05D004280 ORTHO05D005059 7.2e-33 144.8 144 53.5
Os01g0648500 Oryza sativa ssp. japonica HOM05D004280 ORTHO05D005059 3.6e-32 142.5 136 53.7
Nitab4.5_0000131g0050 Nicotiana tabacum HOM05D004280 ORTHO05D005059 5.1e-31 138.7 107 61.7
AL1G63340 Arabidopsis lyrata HOM05D004280 ORTHO05D005059 3.7e-29 132.5 102 61.8
Phvul.001G056500 Phaseolus vulgaris HOM05D004280 ORTHO05D005059 3.7e-29 132.5 107 61.7
SGA_v2.0_scaffold6G03409 Striga asiatica HOM05D004280 ORTHO05D005059 3.1e-28 129.4 122 55.7
Haze_22967 Corylus avellana HOM05D004280 ORTHO05D005059 2.0e-27 126.7 108 59.3
Dinv13451 Davidia involucrata HOM05D004280 ORTHO05D005059 7.7e-27 124.8 89 67.4
Cc00_g23960 Coffea canephora HOM05D004280 ORTHO05D005059 3.8e-26 122.5 98 62.2
Actinidia11301 Actinidia chinensis HOM05D004280 ORTHO05D005059 1.2e-24 117.5 89 62.9
Cfa009582 Carpinus fangiana HOM05D004280 ORTHO05D005059 1.6e-24 117.1 171 42.7
Nitab4.5_0006954g0010 Nicotiana tabacum HOM05D004280 ORTHO05D005059 3.6e-24 115.9 85 64.7
Atru.chr7.1077 Acer truncatum HOM05D004280 ORTHO05D005059 2.0e-22 110.2 132 50.8
PRCOL_00003189 Prasinoderma coloniale HOM05D004280 ORTHO05D005059 1.4e-20 104.0 170 38.2
Cre01.g011200 Chlamydomonas reinhardtii HOM05D004280 ORTHO05D005059 3.1e-20 102.8 140 42.9
Glyma.17G202802 Glycine max HOM05D004280 ORTHO05D005059 7.0e-20 101.7 84 61.9
AagrBONN_evm.TU.Sc2ySwM_362.2805 Anthoceros agrestis HOM05D004280 ORTHO05D005059 1.6e-16 90.5 97 48.5
Zm00001eb211560 Zea mays HOM05D004280 ORTHO05D005059 8.0e-16 88.2 151 39.7
Sopen00g013070 Solanum pennellii HOM05D004280 ORTHO05D005059 1.7e-13 80.5 67 56.7
Cc00_g20490 Coffea canephora HOM05D004280 ORTHO05D005059 3.5e-11 72.8 65 56.9
Cfa024345 Carpinus fangiana HOM05D004280 ORTHO05D122617 1.7e-10 70.5 158 32.3
EL10Ac4g09635 Beta vulgaris HOM05D004280 ORTHO05D005059 4.7e-08 62.4 78 44.9


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