Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0138 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 3.5e-169 598.6 397 100.0
SMO114G0026 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.4e-86 322.0 401 53.1
SMO117G0350 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 2.6e-79 300.1 376 68.6
Lsat_1_v5_gn_4_65161 Lactuca sativa HOM05D005328 ORTHO05D006049 5.3e-64 249.2 400 42.5
Rhsim13G0137800 Rhododendron simsii HOM05D005328 ORTHO05D006049 2.6e-63 246.9 413 41.6
Actinidia02271 Actinidia chinensis HOM05D005328 ORTHO05D006049 1.3e-62 244.6 423 46.1
SGA_v2.0_scaffold7G03648 Striga asiatica HOM05D005328 ORTHO05D006049 2.9e-62 243.4 429 43.8
ECA234G3238 Erigeron canadensis HOM05D005328 ORTHO05D006049 6.4e-62 242.3 408 44.9
Hund04726 Selenicereus undatus HOM05D005328 ORTHO05D006049 8.4e-62 241.9 443 47.2
Nitab4.5_0005721g0030 Nicotiana tabacum HOM05D005328 ORTHO05D006049 4.2e-61 239.6 413 44.8
Hma1.2p1_0391F.1_g142830 Hydrangea macrophylla HOM05D005328 ORTHO05D006049 1.2e-60 238.0 400 44.2
Migut.M01485 Erythranthe guttata HOM05D005328 ORTHO05D006049 1.6e-60 237.7 419 47.7
Thecc.04G160200 Theobroma cacao HOM05D005328 ORTHO05D006049 2.1e-60 237.3 416 44.5
Eucgr.E04239 Eucalyptus grandis HOM05D005328 ORTHO05D006049 3.5e-60 236.5 439 42.1
CAN.G2049.4 Capsicum annuum HOM05D005328 ORTHO05D006049 6.0e-60 235.7 420 42.4
CDE03G0050 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.0e-59 235.0 416 48.1
Dinv04372 Davidia involucrata HOM05D005328 ORTHO05D006049 2.3e-59 233.8 424 42.0
CSS0022453 Camellia sinensis var. sinensis HOM05D005328 ORTHO05D006049 3.9e-59 233.0 429 42.0
unitig_748.g7855 Utricularia gibba HOM05D005328 ORTHO05D006049 6.6e-59 232.3 423 43.7
BcaB02g08879 Brassica carinata HOM05D005328 ORTHO05D006049 1.5e-58 231.1 448 42.4
C03p29470 Brassica napus HOM05D005328 ORTHO05D006049 3.3e-58 229.9 446 44.4
Gohir.D02G007001 Gossypium hirsutum HOM05D005328 ORTHO05D006049 5.6e-58 229.2 413 45.3
BcaC01g05181 Brassica carinata HOM05D005328 ORTHO05D006049 7.3e-58 228.8 446 44.2
Duzib151G0457 Durio zibethinus HOM05D005328 ORTHO05D006049 7.3e-58 228.8 414 44.0
HanXRQChr17g0558521 Helianthus annuus HOM05D005328 ORTHO05D006049 7.3e-58 228.8 400 51.0
Sc13g0008540 Simmondsia chinensis HOM05D005328 ORTHO05D006049 7.3e-58 228.8 409 40.6
BraA05t19414Z Brassica rapa HOM05D005328 ORTHO05D006049 1.6e-57 227.6 448 46.0
Thhalv10001457m.g Eutrema salsugineum HOM05D005328 ORTHO05D006049 1.6e-57 227.6 440 48.9
Sopen02g029040 Solanum pennellii HOM05D005328 ORTHO05D006049 1.6e-57 227.6 434 48.8
BcaB01g03324 Brassica carinata HOM05D005328 ORTHO05D006049 2.8e-57 226.9 411 52.8
Gohir.A02G007200 Gossypium hirsutum HOM05D005328 ORTHO05D006049 6.2e-57 225.7 414 44.9
Aa31LG1G25860 Aethionema arabicum HOM05D005328 ORTHO05D006049 1.1e-56 224.9 425 44.5
Lj6g0010372 Lotus japonicus HOM05D005328 ORTHO05D006049 1.1e-56 224.9 429 42.7
A05p04290 Brassica napus HOM05D005328 ORTHO05D006049 1.8e-56 224.2 448 46.9
COL.COLO4_12851 Corchorus olitorius HOM05D005328 ORTHO05D006049 1.8e-56 224.2 433 43.2
Gorai.005G008200 Gossypium raimondii HOM05D005328 ORTHO05D006049 1.8e-56 224.2 416 45.7
PGR042G0801 Punica granatum HOM05D005328 ORTHO05D006049 1.8e-56 224.2 438 41.6
BcaC02g12330 Brassica carinata HOM05D005328 ORTHO05D006049 2.4e-56 223.8 437 44.2
BraA03t11679Z Brassica rapa HOM05D005328 ORTHO05D006049 4.0e-56 223.0 459 43.1
Solyc02g084340.3 Solanum lycopersicum HOM05D005328 ORTHO05D006049 4.0e-56 223.0 451 49.9
Manes.03G095600 Manihot esculenta HOM05D005328 ORTHO05D006049 5.3e-56 222.6 440 39.8
TWI63G1825 Tripterygium wilfordii HOM05D005328 ORTHO05D006049 5.3e-56 222.6 432 46.1
A03p24730 Brassica napus HOM05D005328 ORTHO05D006049 6.9e-56 222.2 459 42.9
C04p05070 Brassica napus HOM05D005328 ORTHO05D006049 9.0e-56 221.9 450 46.2
HPP92_007484 Vanilla planifolia HOM05D005328 ORTHO05D006049 1.2e-55 221.5 405 43.7
Ciclev10015350m.g Citrus clementina HOM05D005328 ORTHO05D006049 2.6e-55 220.3 427 42.4
Oeu016925.1 Olea europaea HOM05D005328 ORTHO05D006049 2.2e-54 217.2 459 37.0
AagrBONN_evm.TU.Sc2ySwM_228.5016 Anthoceros agrestis HOM05D005328 ORTHO05D006049 4.9e-54 216.1 164 70.1
vmacro03583 Vaccinium macrocarpon HOM05D005328 ORTHO05D006049 6.4e-54 215.7 454 38.1
Peaxi162Scf00083g00091 Petunia axillaris HOM05D005328 ORTHO05D006049 1.4e-53 214.5 427 51.8
TAR626G1462 Trochodendron aralioides HOM05D005328 ORTHO05D006049 9.3e-53 211.8 461 37.7
Potri.006G000200 Populus trichocarpa HOM05D005328 ORTHO05D006049 1.2e-52 211.5 481 37.4
AUR62021212 Chenopodium quinoa HOM05D005328 ORTHO05D006049 2.1e-52 210.7 439 44.4
Atru.chr1.2204 Acer truncatum HOM05D005328 ORTHO05D006049 3.5e-52 209.9 494 34.0
Phvul.006G134100 Phaseolus vulgaris HOM05D005328 ORTHO05D006049 4.6e-52 209.5 474 42.0
AL4G43160 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 6.0e-52 209.1 465 47.1
Nitab4.5_0002880g0010 Nicotiana tabacum HOM05D005328 ORTHO05D006049 3.9e-51 206.5 413 41.4
Aqoxy6G01137 Aquilegia oxysepala HOM05D005328 ORTHO05D006049 5.1e-51 206.1 538 36.6
AT2G44200 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 5.1e-51 206.1 497 41.2
THA.LOC104804861 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 5.1e-51 206.1 459 41.6
THA.LOC104807080 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 5.1e-51 206.1 459 41.6
VMungo0540G0318 Vigna mungo HOM05D005328 ORTHO05D006049 6.7e-51 205.7 475 38.7
Cpa.g.sc53.124 Carica papaya HOM05D005328 ORTHO05D006049 8.7e-51 205.3 483 38.1
QL05p066147 Quercus lobata HOM05D005328 ORTHO05D006049 1.1e-50 204.9 428 44.2
Sp4g26280 Schrenkiella parvula HOM05D005328 ORTHO05D006049 1.1e-50 204.9 473 46.1
Ca_00786_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.5e-50 204.5 432 40.7
Ca_11373_v3 Cicer arietinum L. HOM05D005328 ORTHO05D006049 1.5e-50 204.5 432 40.7
CARHR139360 Cardamine hirsuta HOM05D005328 ORTHO05D006049 2.5e-50 203.8 505 41.4
TPR.G10498 Trifolium pratense HOM05D005328 ORTHO05D006049 2.5e-50 203.8 454 45.6
Pp3c3_9980 Physcomitrium patens HOM05D005328 ORTHO05D006049 7.4e-50 202.2 167 67.1
CiPaw.10G085200 Carya illinoinensis HOM05D005328 ORTHO05D006049 1.4e-48 198.0 421 48.9
Glyma.15G123900 Glycine max HOM05D005328 ORTHO05D006049 2.6e-47 193.7 490 33.3
MD04G1014200 Malus domestica HOM05D005328 ORTHO05D006049 4.5e-47 193.0 546 35.7
PSO017G7149 Papaver somniferum HOM05D005328 ORTHO05D006049 1.7e-46 191.0 508 38.6
CBR_g2953 Chara braunii HOM05D005328 ORTHO05D006049 2.2e-46 190.7 169 63.3
BolC3t15295H Brassica oleracea HOM05D005328 ORTHO05D006049 4.9e-46 189.5 476 39.3
EL10Ac3g05669 Beta vulgaris HOM05D005328 ORTHO05D006049 1.9e-45 187.6 493 44.0
Sabra06G0000700 Salix brachista HOM05D005328 ORTHO05D006049 3.2e-45 186.8 469 36.5
SEGI_06923 Sequoiadendron giganteum HOM05D005328 ORTHO05D006049 4.2e-45 186.4 619 40.1
Sed0006700 Sechium edule HOM05D005328 ORTHO05D006049 7.1e-45 185.7 529 31.4
PGSC0003DMG400003630 Solanum tuberosum HOM05D005328 ORTHO05D006049 7.1e-45 185.7 169 60.4
DCAR_022839 Daucus carota HOM05D005328 ORTHO05D006049 1.2e-44 184.9 164 61.6
FvH4_4g13451 Fragaria vesca HOM05D005328 ORTHO05D006049 2.1e-44 184.1 168 60.1
FAN12G3626 Fragaria x ananassa HOM05D005328 ORTHO05D006049 2.1e-44 184.1 168 60.1
Prupe.1G161200 Prunus persica HOM05D005328 ORTHO05D006049 2.1e-44 184.1 168 60.1
MELO3C017635.2 Cucumis melo HOM05D005328 ORTHO05D006049 7.9e-44 182.2 421 39.0
FAN22G2230 Fragaria x ananassa HOM05D005328 ORTHO05D006049 7.9e-44 182.2 168 59.5
Glyma.09G018000 Glycine max HOM05D005328 ORTHO05D006049 7.9e-44 182.2 172 58.7
FAN07G1972 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.0e-43 180.3 168 61.3
Medtr2g028200 Medicago truncatula HOM05D005328 ORTHO05D006049 3.0e-43 180.3 504 41.1
SMO117G0022 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 5.1e-43 179.5 119 81.5
arahy.Tifrunner.gnm1.ann1.B05UD4 Arachis hypogaea HOM05D005328 ORTHO05D006049 6.7e-43 179.1 466 38.0
Os08g0500200 Oryza sativa ssp. japonica HOM05D005328 ORTHO05D006049 1.9e-42 177.6 513 38.4
Lalb_Chr15g0088491 Lupinus albus HOM05D005328 ORTHO05D006049 3.3e-42 176.8 505 36.2
ClCG07G017100 Citrullus lanatus HOM05D005328 ORTHO05D006049 5.7e-42 176.0 429 39.4
PSO170G6444 Papaver somniferum HOM05D005328 ORTHO05D006049 5.7e-42 176.0 544 38.6
Cc09_g00040 Coffea canephora HOM05D005328 ORTHO05D006049 7.4e-42 175.6 573 29.8
CsaV3_4G004310 Cucumis sativus L. HOM05D005328 ORTHO05D006049 4.8e-41 172.9 417 40.0
THA.LOC104798630 Tarenaya hassleriana HOM05D005328 ORTHO05D006049 1.4e-40 171.4 245 44.5
Ah.07g207330 Amaranthus hybridus HOM05D005328 ORTHO05D002024 6.9e-40 169.1 555 42.3
GSVIVG01018754001 Vitis vinifera HOM05D005328 ORTHO05D006049 6.9e-40 169.1 575 39.0
Psat1g170800 Pisum sativum HOM05D005328 ORTHO05D006049 2.6e-39 167.2 483 41.0
Mapoly0104s0032 Marchantia polymorpha HOM05D005328 ORTHO05D006049 7.6e-39 165.6 173 56.1
Carub.0004s2678 Capsella rubella HOM05D005328 ORTHO05D006049 1.0e-38 165.2 530 35.8
SalBow8G1780 Salvia bowleyana HOM05D005328 ORTHO05D006049 1.0e-38 165.2 530 32.6
RcHm_v2.0_Chr4g0414011 Rosa chinensis HOM05D005328 ORTHO05D006049 3.8e-38 163.3 534 36.1
arahy.Tifrunner.gnm1.ann1.QMQM64 Arachis hypogaea HOM05D005328 ORTHO05D006049 5.0e-38 162.9 530 34.3
FAN17G2578 Fragaria x ananassa HOM05D005328 ORTHO05D006049 3.2e-37 160.2 577 35.9
SMO117G0182 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 4.1e-32 143.3 116 68.1
Nn1g08402 Nelumbo nucifera HOM05D005328 ORTHO05D006049 1.3e-30 138.3 409 39.1
ATR0751G077 Amborella trichopoda HOM05D005328 ORTHO05D006049 1.4e-29 134.8 99 74.7
Carub.0004s2677 Capsella rubella HOM05D005328 ORTHO05D006049 2.5e-29 134.0 161 49.7
CDE06G1717 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 4.2e-29 133.3 86 80.2
QL05p065813 Quercus lobata HOM05D005328 ORTHO05D006049 5.5e-29 132.9 82 84.1
SMO117G0245 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 6.1e-28 129.4 101 69.3
AUR62016005 Chenopodium quinoa HOM05D005328 ORTHO05D006049 3.0e-27 127.1 86 75.6
SMO246G0007 Selaginella moellendorffii HOM05D005328 ORTHO05D006049 9.7e-26 122.1 63 100.0
AT2G44195 Arabidopsis thaliana HOM05D005328 ORTHO05D006049 8.2e-25 119.0 142 51.4
Zm00001eb034090 Zea mays HOM05D005328 ORTHO05D006049 1.4e-24 118.2 505 36.8
Prupe.1G162300 Prunus persica HOM05D005328 ORTHO05D006049 1.5e-23 114.8 163 44.8
AUR62016004 Chenopodium quinoa HOM05D005328 ORTHO05D006049 5.0e-22 109.8 348 40.2
ATR0751G111 Amborella trichopoda HOM05D005328 ORTHO05D006049 7.9e-20 102.4 314 35.4
Cre01.g021400 Chlamydomonas reinhardtii HOM05D005328 ORTHO05D006049 7.4e-18 95.9 167 36.5
PRCOL_00001794 Prasinoderma coloniale HOM05D005328 ORTHO05D006049 1.3e-17 95.1 180 33.9
DCAR_022842 Daucus carota HOM05D005328 ORTHO05D006049 2.2e-17 94.4 99 55.6
Prupe.1G161500 Prunus persica HOM05D005328 ORTHO05D006049 1.8e-16 91.3 95 51.6
AL4G43150 Arabidopsis lyrata HOM05D005328 ORTHO05D006049 9.1e-16 89.0 161 39.8
Zm00001eb097520 Zea mays HOM05D005328 ORTHO05D006049 2.0e-15 87.8 102 51.0
CDE06G0152 Ceratophyllum demersum HOM05D005328 ORTHO05D006049 1.3e-14 85.1 123 39.8
Cfa024420 Carpinus fangiana HOM05D005328 ORTHO05D006049 8.5e-14 82.4 160 35.6
VMungo1383G0559 Vigna mungo HOM05D005328 ORTHO05D006049 3.2e-13 80.5 53 73.6
TAR371G0561 Trochodendron aralioides HOM05D005328 ORTHO05D006049 1.8e-08 64.7 56 57.1
Haze_07067 Corylus avellana HOM05D005328 ORTHO05D006049 1.6e-07 61.6 109 41.3
Sabra16G0007800 Salix brachista HOM05D000040 ORTHO05D001305 4.5e-07 60.1 64 51.6
BcaB02g08878 Brassica carinata HOM05D005328 ORTHO05D006049 7.7e-07 59.3 83 45.8


User provided reference genes

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