Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO143G0135 Selaginella moellendorffii HOM05D000294 ORTHO05D000177 8.1e-156 553.9 321 100.0
Prupe.7G123100 Prunus persica HOM05D000294 ORTHO05D000177 1.8e-09 67.8 176 25.6
FAN09G0898 Fragaria x ananassa HOM05D000294 ORTHO05D000177 5.1e-09 66.2 179 25.7
SGA_v2.0_scaffold224G42917 Striga asiatica HOM05D000294 ORTHO05D000177 8.7e-09 65.5 138 28.3
CiPaw.09G005000 Carya illinoinensis HOM05D000294 ORTHO05D000177 3.3e-08 63.5 135 25.9
FvH4_6g17200 Fragaria vesca HOM05D000294 ORTHO05D000177 3.3e-08 63.5 180 26.1
MD14G1097400 Malus domestica HOM05D000294 ORTHO05D000177 3.3e-08 63.5 176 23.9
FAN05G2336 Fragaria x ananassa HOM05D000294 ORTHO05D000177 5.6e-08 62.8 180 26.1
RcHm_v2.0_Chr3g0471281 Rosa chinensis HOM05D000294 ORTHO05D000177 5.6e-08 62.8 180 26.1
Zm00001eb341550 Zea mays HOM05D000294 ORTHO05D000177 5.6e-08 62.8 178 27.0
Eucgr.B03915 Eucalyptus grandis HOM05D000294 ORTHO05D000177 7.4e-08 62.4 137 29.2
MD12G1103000 Malus domestica HOM05D000294 ORTHO05D000177 7.4e-08 62.4 175 24.0
FAN02G4378 Fragaria x ananassa HOM05D000294 ORTHO05D000177 9.6e-08 62.0 140 28.6
Lj5g0005401 Lotus japonicus HOM05D000294 ORTHO05D000177 9.6e-08 62.0 122 28.7
PGR083G2123 Punica granatum HOM05D000294 ORTHO05D000177 9.6e-08 62.0 178 27.5
CSS0039810 Camellia sinensis var. sinensis HOM05D000294 ORTHO05D000177 1.3e-07 61.6 161 26.7
EL10Ac7g16704 Beta vulgaris HOM05D000294 ORTHO05D000177 1.6e-07 61.2 137 24.8
Haze_19476 Corylus avellana HOM05D000294 ORTHO05D000177 1.6e-07 61.2 156 26.3
FAN05G4086 Fragaria x ananassa HOM05D000294 ORTHO05D000177 1.6e-07 61.2 140 28.6
FAN14G3824 Fragaria x ananassa HOM05D000294 ORTHO05D000177 1.6e-07 61.2 140 27.9
Medtr1g062160 Medicago truncatula HOM05D000294 ORTHO05D000177 1.6e-07 61.2 150 25.3
Actinidia32471 Actinidia chinensis HOM05D000294 ORTHO05D000177 2.1e-07 60.8 136 26.5
CDE06G1405 Ceratophyllum demersum HOM05D000294 ORTHO05D000177 2.1e-07 60.8 132 26.5
Potri.001G212400 Populus trichocarpa HOM05D000294 ORTHO05D000177 2.1e-07 60.8 141 27.7
Potri.006G119400 Populus trichocarpa HOM05D000294 ORTHO05D000177 2.1e-07 60.8 129 26.4
Actinidia31309 Actinidia chinensis HOM05D000294 ORTHO05D000177 2.8e-07 60.5 136 26.5
CiPaw.10G002400 Carya illinoinensis HOM05D000294 ORTHO05D000177 2.8e-07 60.5 136 26.5
Glyma.10G063200 Glycine max HOM05D000294 ORTHO05D000177 2.8e-07 60.5 129 27.1
QL07p041425 Quercus lobata HOM05D000294 ORTHO05D000177 2.8e-07 60.5 135 25.9
Ciclev10012756m.g Citrus clementina HOM05D000294 ORTHO05D000177 3.7e-07 60.1 131 26.0
RcHm_v2.0_Chr5g0056371 Rosa chinensis HOM05D000294 ORTHO05D000177 3.7e-07 60.1 172 24.4
Ciclev10030107m.g Citrus clementina HOM05D000294 ORTHO05D000177 4.8e-07 59.7 132 26.5
Cc06_g04770 Coffea canephora HOM05D000294 ORTHO05D000177 4.8e-07 59.7 129 26.4
Eucgr.A01594 Eucalyptus grandis HOM05D000294 ORTHO05D000177 4.8e-07 59.7 151 27.8
FvH4_3g30410 Fragaria vesca HOM05D000294 ORTHO05D000177 4.8e-07 59.7 140 25.7
FAN11G1202 Fragaria x ananassa HOM05D000294 ORTHO05D000177 4.8e-07 59.7 140 25.7
Glyma.03G188000 Glycine max HOM05D000294 ORTHO05D000177 4.8e-07 59.7 168 25.6
MBI04_g02212_MAGBIO Magnolia biondii HOM05D000294 ORTHO05D000177 4.8e-07 59.7 148 25.0
Manes.08G016000 Manihot esculenta HOM05D000294 ORTHO05D000177 4.8e-07 59.7 135 25.2
VMungo1383G1530 Vigna mungo HOM05D000294 ORTHO05D000177 4.8e-07 59.7 129 27.1
CiPaw.13G144000 Carya illinoinensis HOM05D000294 ORTHO05D000177 6.2e-07 59.3 138 29.0
Phvul.001G183400 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 6.2e-07 59.3 129 27.1
SMO119G0112 Selaginella moellendorffii HOM05D000294 ORTHO05D000177 6.2e-07 59.3 151 25.8
MSTRG.26666 Avicennia marina HOM05D000294 ORTHO05D000177 8.1e-07 58.9 197 24.9
MD11G1151300 Malus domestica HOM05D000294 ORTHO05D000177 8.1e-07 58.9 136 26.5
TPR.G31673 Trifolium pratense HOM05D000294 ORTHO05D000177 8.1e-07 58.9 131 25.2
COL.COLO4_22253 Corchorus olitorius HOM05D000294 ORTHO05D000177 1.1e-06 58.5 129 25.6
Lj1g0003860 Lotus japonicus HOM05D000294 ORTHO05D000177 1.1e-06 58.5 155 24.5
vmacro08804 Vaccinium macrocarpon HOM05D000294 ORTHO05D000177 1.1e-06 58.5 135 25.9
GSVIVG01033703001 Vitis vinifera HOM05D000294 ORTHO05D000177 1.1e-06 58.5 154 26.6
Cpa.g.sc30.61 Carica papaya HOM05D000294 ORTHO05D000177 1.4e-06 58.2 124 28.2
Cpa.g.sc5.128 Carica papaya HOM05D000294 ORTHO05D000177 1.4e-06 58.2 151 23.8
DCAR_015017 Daucus carota HOM05D000294 ORTHO05D000177 1.4e-06 58.2 170 25.3
Lsat_1_v5_gn_2_2940 Lactuca sativa HOM05D000294 ORTHO05D000177 1.4e-06 58.2 133 29.3
Manes.18G000750 Manihot esculenta HOM05D000294 ORTHO05D000177 1.4e-06 58.2 148 27.7
Medtr7g102790 Medicago truncatula HOM05D000294 ORTHO05D000177 1.4e-06 58.2 131 25.2
Nn2g13896 Nelumbo nucifera HOM05D000294 ORTHO05D000177 1.4e-06 58.2 129 26.4
Psat3g038000 Pisum sativum HOM05D000294 ORTHO05D000177 1.4e-06 58.2 137 24.1
Potri.009G003200 Populus trichocarpa HOM05D000294 ORTHO05D000177 1.4e-06 58.2 140 27.9
SMO169G0233 Selaginella moellendorffii HOM05D000294 ORTHO05D000177 1.4e-06 58.2 123 29.3
Glyma.19G188200 Glycine max HOM05D000294 ORTHO05D000177 1.8e-06 57.8 129 26.4
Lj3g0004199 Lotus japonicus HOM05D000294 ORTHO05D000177 1.8e-06 57.8 171 26.3
Lalb_Chr22g0350461 Lupinus albus HOM05D000294 ORTHO05D000177 1.8e-06 57.8 179 22.9
Nn6g35174 Nelumbo nucifera HOM05D000294 ORTHO05D000177 1.8e-06 57.8 140 25.7
Peaxi162Scf00500g00115 Petunia axillaris HOM05D000294 ORTHO05D000177 1.8e-06 57.8 130 26.2
Phvul.007G226200 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 1.8e-06 57.8 116 28.4
Pp3c13_4760 Physcomitrium patens HOM05D000294 ORTHO05D000177 1.8e-06 57.8 129 27.1
Pp3c3_3180 Physcomitrium patens HOM05D000294 ORTHO05D000177 1.8e-06 57.8 133 27.1
Actinidia15542 Actinidia chinensis HOM05D000294 ORTHO05D000177 2.4e-06 57.4 179 25.7
Dinv37356 Davidia involucrata HOM05D000294 ORTHO05D000177 2.4e-06 57.4 129 25.6
FAN04G0429 Fragaria x ananassa HOM05D000294 ORTHO05D000177 2.4e-06 57.4 167 26.3
Glyma.13G147800 Glycine max HOM05D000294 ORTHO05D000177 2.4e-06 57.4 129 26.4
Solyc10g085800.2 Solanum lycopersicum HOM05D000294 ORTHO05D000177 2.4e-06 57.4 130 25.4
Sopen10g035200 Solanum pennellii HOM05D000294 ORTHO05D000177 2.4e-06 57.4 130 25.4
PGSC0003DMG400008598 Solanum tuberosum HOM05D000294 ORTHO05D000177 2.4e-06 57.4 130 25.4
ATR0605G244 Amborella trichopoda HOM05D000294 ORTHO05D000177 3.1e-06 57.0 129 25.6
MSTRG.10337 Avicennia marina HOM05D000294 ORTHO05D000177 3.1e-06 57.0 138 26.8
Gohir.A09G143200 Gossypium hirsutum HOM05D000294 ORTHO05D000177 3.1e-06 57.0 129 24.8
Gohir.D09G139400 Gossypium hirsutum HOM05D000294 ORTHO05D000177 3.1e-06 57.0 129 24.8
Gorai.006G159900 Gossypium raimondii HOM05D000294 ORTHO05D000177 3.1e-06 57.0 129 24.8
Lsat_1_v5_gn_1_52700 Lactuca sativa HOM05D000294 ORTHO05D000177 3.1e-06 57.0 170 25.3
Phvul.003G173300 Phaseolus vulgaris HOM05D000294 ORTHO05D000177 3.1e-06 57.0 151 26.5
Psat6g077040 Pisum sativum HOM05D000294 ORTHO05D000177 3.1e-06 57.0 135 25.2
Sabra06G0094000 Salix brachista HOM05D000294 ORTHO05D000177 3.1e-06 57.0 129 24.8
MSTRG.17167 Avicennia marina HOM05D000294 ORTHO05D000177 4.0e-06 56.6 149 28.2
CAN.G729.3 Capsicum annuum HOM05D000294 ORTHO05D000177 4.0e-06 56.6 130 25.4
MD03G1129200 Malus domestica HOM05D000294 ORTHO05D000177 4.0e-06 56.6 139 26.6
Potri.016G097100 Populus trichocarpa HOM05D000294 ORTHO05D000177 4.0e-06 56.6 129 24.8
PGR031G3223 Punica granatum HOM05D000294 ORTHO05D000177 4.0e-06 56.6 137 28.5
QL01p014706 Quercus lobata HOM05D000294 ORTHO05D000177 4.0e-06 56.6 136 26.5
Hund13609 Selenicereus undatus HOM05D000294 ORTHO05D000177 4.0e-06 56.6 116 27.6
SGA_v2.0_scaffold161G37844 Striga asiatica HOM05D000294 ORTHO05D000177 4.0e-06 56.6 152 27.6
VMungo0720G1924 Vigna mungo HOM05D000294 ORTHO05D000177 4.0e-06 56.6 116 28.4
GSVIVG01031446001 Vitis vinifera HOM05D000294 ORTHO05D000177 4.0e-06 56.6 129 28.7
AUR62042708 Chenopodium quinoa HOM05D000294 ORTHO05D000177 5.3e-06 56.2 116 26.7
Haze_15158 Corylus avellana HOM05D000294 ORTHO05D000177 5.3e-06 56.2 131 28.2
Duzib106G1414 Durio zibethinus HOM05D000294 ORTHO05D000177 5.3e-06 56.2 129 25.6
ECA233G1771 Erigeron canadensis HOM05D000294 ORTHO05D000177 5.3e-06 56.2 116 30.2
Glyma.13G164800 Glycine max HOM05D000294 ORTHO05D000177 5.3e-06 56.2 151 25.8
Nitab4.5_0009839g0020 Nicotiana tabacum HOM05D000294 ORTHO05D000177 5.3e-06 56.2 130 25.4
Peaxi162Scf00146g00112 Petunia axillaris HOM05D000294 ORTHO05D000177 5.3e-06 56.2 129 24.8
Pp3c4_30530 Physcomitrium patens HOM05D000294 ORTHO05D000177 5.3e-06 56.2 129 27.1
MSTRG.19208 Avicennia marina HOM05D000294 ORTHO05D000177 6.9e-06 55.8 132 28.8
Nn6g31572 Nelumbo nucifera HOM05D000294 ORTHO05D000177 6.9e-06 55.8 179 22.9
Potri.018G116000 Populus trichocarpa HOM05D000294 ORTHO05D000177 6.9e-06 55.8 150 26.7
Sabra04G0148400 Salix brachista HOM05D000294 ORTHO05D000177 6.9e-06 55.8 152 26.3
TPR.G9894 Trifolium pratense HOM05D000294 ORTHO05D000177 6.9e-06 55.8 150 24.7
TWI74G0192 Tripterygium wilfordii HOM05D000294 ORTHO05D000177 6.9e-06 55.8 116 25.9
CBR_g6725 Chara braunii HOM05D000294 ORTHO05D000177 9.0e-06 55.5 121 30.6
Dinv35832 Davidia involucrata HOM05D000294 ORTHO05D000177 9.0e-06 55.5 130 24.6
Hma1.2p1_0547F.1_g176310 Hydrangea macrophylla HOM05D000294 ORTHO05D000177 9.0e-06 55.5 129 24.8
Lalb_Chr02g0155441 Lupinus albus HOM05D000294 ORTHO05D000177 9.0e-06 55.5 150 24.0
Manes.11G153600 Manihot esculenta HOM05D000294 ORTHO05D000177 9.0e-06 55.5 127 28.3
Nitab4.5_0000725g0030 Nicotiana tabacum HOM05D000294 ORTHO05D000177 9.0e-06 55.5 130 25.4
Nitab4.5_0009514g0070 Nicotiana tabacum HOM05D000294 ORTHO05D000177 9.0e-06 55.5 125 25.6
Oeu023987.1 Olea europaea HOM05D000294 ORTHO05D000177 9.0e-06 55.5 129 28.7
Os10g0574700 Oryza sativa ssp. japonica HOM05D000294 ORTHO05D000177 9.0e-06 55.5 123 27.6
Pp3c18_12180 Physcomitrium patens HOM05D000294 ORTHO05D000177 9.0e-06 55.5 139 26.6
Pp3c26_11480 Physcomitrium patens HOM05D000294 ORTHO05D000177 9.0e-06 55.5 129 27.1
unitig_8.g4907 Utricularia gibba HOM05D000294 ORTHO05D000177 9.0e-06 55.5 151 27.8


User provided reference genes

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