Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO122G0001 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 5.2e-26 120.2 56 100.0
SMO009G0003 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 2.8e-19 97.8 56 85.7
SMO274G0006 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 4.7e-19 97.1 56 83.9
SMO167G0083 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 4.0e-18 94.0 56 82.1
SMO118G0148 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 8.9e-18 92.8 56 78.6
SMO269G0051 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 5.8e-17 90.1 56 82.1
SMO118G0321 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 7.0e-15 83.2 55 70.9
SMO119G0154 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 2.0e-14 81.6 56 71.4
AagrBONN_evm.TU.Sc2ySwM_344.3288 Anthoceros agrestis HOM05D003563 ORTHO05D005325 2.3e-13 78.2 56 69.6
AagrBONN_evm.TU.Sc2ySwM_368.1410 Anthoceros agrestis HOM05D003563 ORTHO05D005325 3.9e-13 77.4 56 67.9
SMO122G0006 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 3.9e-13 77.4 52 73.1
SMO286G0013 Selaginella moellendorffii HOM05D003563 ORTHO05D018110 9.5e-12 72.8 54 66.7
SMO340G0102 Selaginella moellendorffii HOM05D003563 ORTHO05D005325 3.6e-11 70.9 56 58.9
PRCOL_00005031 Prasinoderma coloniale HOM05D003563 ORTHO05D005325 6.2e-11 70.1 56 62.5
CBR_g52178 Chara braunii HOM05D003563 ORTHO05D005325 2.0e-09 65.1 56 57.1
CBR_g3932 Chara braunii HOM05D003563 ORTHO05D005325 9.8e-09 62.8 56 57.1
Cre03.g175400 Chlamydomonas reinhardtii HOM05D003563 ORTHO05D005325 9.8e-09 62.8 56 50.0
Pp3c16_6380 Physcomitrium patens HOM05D003563 ORTHO05D005325 2.9e-08 61.2 56 55.4
PGR083G2760 Punica granatum HOM05D003563 ORTHO05D005325 2.9e-08 61.2 56 50.0
Hund14325 Selenicereus undatus HOM05D003563 ORTHO05D005325 4.9e-08 60.5 56 53.6
Mapoly0034s0044 Marchantia polymorpha HOM05D003563 ORTHO05D005325 6.4e-08 60.1 56 57.1
Pp3c25_1860 Physcomitrium patens HOM05D003563 ORTHO05D005325 8.3e-08 59.7 56 53.6
Pp3c6_18070 Physcomitrium patens HOM05D003563 ORTHO05D005325 1.4e-07 58.9 51 54.9
Zm00001eb059230 Zea mays HOM05D003563 ORTHO05D005325 1.4e-07 58.9 56 51.8
Pp3c5_3820 Physcomitrium patens HOM05D003563 ORTHO05D005325 1.9e-07 58.5 56 53.6
PSO541G4717 Papaver somniferum HOM05D003563 ORTHO05D005325 2.4e-07 58.2 56 50.0
Ah.02g117440 Amaranthus hybridus HOM05D003563 ORTHO05D005325 3.2e-07 57.8 56 50.0
Sc02g0006230 Simmondsia chinensis HOM05D003563 ORTHO05D005325 3.2e-07 57.8 56 46.4
Aqoxy6G01090 Aquilegia oxysepala HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 48.2
Thhalv10003173m.g Eutrema salsugineum HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 51.8
Glyma.19G017200 Glycine max HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 46.4
Lsat_1_v5_gn_4_119160 Lactuca sativa HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 46.4
Os03g0776000 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 46.4
Prupe.1G380500 Prunus persica HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 46.4
THA.LOC104798643 Tarenaya hassleriana HOM05D003563 ORTHO05D005325 4.1e-07 57.4 56 51.8
Ca_04241_v3 Cicer arietinum L. HOM05D003563 ORTHO05D005325 5.4e-07 57.0 56 44.6
Peaxi162Scf00333g00512 Petunia axillaris HOM05D003563 ORTHO05D005325 5.4e-07 57.0 56 48.2
Sopen12g006150 Solanum pennellii HOM05D003563 ORTHO05D005325 5.4e-07 57.0 56 46.4
VMungo0464G1852 Vigna mungo HOM05D003563 ORTHO05D005325 5.4e-07 57.0 56 44.6
CDE11G0237 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 46.4
AUR62007425 Chenopodium quinoa HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 48.2
AUR62027308 Chenopodium quinoa HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 48.2
Eucgr.F01561 Eucalyptus grandis HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 48.2
Nitab4.5_0000194g0210 Nicotiana tabacum HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 48.2
PSO675G8753 Papaver somniferum HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 48.2
GSVIVG01009697001 Vitis vinifera HOM05D003563 ORTHO05D005325 7.0e-07 56.6 56 44.6
Aa31LG9G12790 Aethionema arabicum HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 50.0
CANSAT21G1125 Cannabis sativa HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 48.2
CAN.G233.10 Capsicum annuum HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 46.4
Cfa018145 Carpinus fangiana HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 44.6
Haze_07272 Corylus avellana HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 44.6
MD15G1031400 Malus domestica HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 44.6
MCO02G104 Micromonas commoda HOM05D003563 ORTHO05D005325 9.2e-07 56.2 55 47.3
Phvul.004G023500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 9.2e-07 56.2 56 44.6
arahy.Tifrunner.gnm1.ann1.7JQX15 Arachis hypogaea HOM05D003563 ORTHO05D005325 1.2e-06 55.8 56 46.4
arahy.Tifrunner.gnm1.ann1.UW0ZL7 Arachis hypogaea HOM05D003563 ORTHO05D005325 1.2e-06 55.8 56 46.4
Cpa.g.sc36.68 Carica papaya HOM05D003563 ORTHO05D005325 1.2e-06 55.8 55 45.5
Solyc12g014380.3 Solanum lycopersicum HOM05D003563 ORTHO05D005325 1.2e-06 55.8 56 44.6
VMungo0464G1044 Vigna mungo HOM05D003563 ORTHO05D005325 1.2e-06 55.8 56 44.6
ECA232G1124 Erigeron canadensis HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 44.6
HanXRQChr09g0268611 Helianthus annuus HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 44.6
Hma1.2p1_0105F.1_g050870 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
Hma1.2p1_0105F.1_g050873 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
Hma1.2p1_0105F.1_g050876 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
Hma1.2p1_0105F.1_g050879 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
Nn1g05025 Nelumbo nucifera HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 44.6
Nn5g29576 Nelumbo nucifera HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 44.6
Os06g0256500 Oryza sativa ssp. japonica HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
unitig_37.g12990 Utricularia gibba HOM05D003563 ORTHO05D005325 1.6e-06 55.5 56 46.4
HPP92_002716 Vanilla planifolia HOM05D003563 ORTHO05D005325 1.6e-06 55.5 55 45.5
FAN27G1814 Fragaria x ananassa HOM05D003563 ORTHO05D005325 2.1e-06 55.1 56 44.6
Hma1.2p1_0203F.1_g086419 Hydrangea macrophylla HOM05D003563 ORTHO05D005325 2.1e-06 55.1 56 46.4
MD08G1034600 Malus domestica HOM05D003563 ORTHO05D005325 2.1e-06 55.1 56 42.9
CiPaw.15G077500 Carya illinoinensis HOM05D003563 ORTHO05D005325 2.7e-06 54.7 56 42.9
Cc10_g02970 Coffea canephora HOM05D003563 ORTHO05D005325 2.7e-06 54.7 56 42.9
SGA_v2.0_scaffold54G19524 Striga asiatica HOM05D003563 ORTHO05D005325 2.7e-06 54.7 56 44.6
TAR381G1659 Trochodendron aralioides HOM05D003563 ORTHO05D005325 2.7e-06 54.7 56 42.9
BcaC04g21978 Brassica carinata HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
A09p19900 Brassica napus HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
C09p25230 Brassica napus HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
BolC9t55419H Brassica oleracea HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
BraA09t37600Z Brassica rapa HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
Carub.0008s0621 Capsella rubella HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
CARHR213980 Cardamine hirsuta HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 48.2
FvH4_2g39910 Fragaria vesca HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 44.6
Phvul.009G057500 Phaseolus vulgaris HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 42.9
Rhsim06G0034400 Rhododendron simsii HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 42.9
Thecc.08G025500 Theobroma cacao HOM05D003563 ORTHO05D005325 3.5e-06 54.3 56 44.6
AT5G42740 Arabidopsis thaliana HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 48.2
CARHR181650 Cardamine hirsuta HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 48.2
CDE05G1619 Ceratophyllum demersum HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 44.6
MELO3C010936.2 Cucumis melo HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 42.9
Dinv39412 Davidia involucrata HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 44.6
SHI08159 Sapria himalayana HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 46.4
TWI56G0595 Tripterygium wilfordii HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 48.2
vmacro21635 Vaccinium macrocarpon HOM05D003563 ORTHO05D005325 4.6e-06 53.9 56 41.1
Atru.chr13.492 Acer truncatum HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
BcaB07g31057 Brassica carinata HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 48.2
BcaB07g31058 Brassica carinata HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 48.2
Ciclev10000722m.g Citrus clementina HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
Dinv36074 Davidia involucrata HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 44.6
Glyma.04G032600 Glycine max HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
Glyma.06G032500 Glycine max HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
RcHm_v2.0_Chr6g0300881 Rosa chinensis HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
Sp2g07360 Schrenkiella parvula HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 48.2
Sed0018414 Sechium edule HOM05D003563 ORTHO05D005325 6.0e-06 53.5 56 42.9
CSS0002435 Camellia sinensis var. sinensis HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 42.9
Lj7C352G3 Lonicera japonica HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 44.6
Nitab4.5_0009269g0010 Nicotiana tabacum HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 44.6
Oeu010500.1 Olea europaea HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 44.6
Psat1g077120 Pisum sativum HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 44.6
QL02p008438 Quercus lobata HOM05D003563 ORTHO05D005325 7.8e-06 53.1 56 42.9


User provided reference genes

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