Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SMO114G0145 Selaginella moellendorffii HOM05D004479 ORTHO05D005597 1.2e-257 892.9 547 100.0
Pp3c18_4030 Physcomitrium patens HOM05D004479 ORTHO05D005597 1.4e-59 235.0 284 48.6
Mapoly0029s0023 Marchantia polymorpha HOM05D004479 ORTHO05D005597 3.9e-49 200.3 554 37.7
RcHm_v2.0_Chr4g0395701 Rosa chinensis HOM05D004479 ORTHO05D005597 1.1e-46 192.2 273 41.8
Nn7g37005 Nelumbo nucifera HOM05D004479 ORTHO05D005597 1.8e-46 191.4 283 41.7
Prupe.1G049400 Prunus persica HOM05D004479 ORTHO05D005597 6.8e-46 189.5 263 41.8
ATR0626G211 Amborella trichopoda HOM05D004479 ORTHO05D005597 1.2e-45 188.7 417 37.4
MD16G1227300 Malus domestica HOM05D004479 ORTHO05D005597 1.2e-45 188.7 288 39.2
Sp2g14070 Schrenkiella parvula HOM05D004479 ORTHO05D005597 4.4e-45 186.8 216 45.8
Eucgr.J03177 Eucalyptus grandis HOM05D004479 ORTHO05D005597 5.8e-45 186.4 198 50.0
BcaC04g21507 Brassica carinata HOM05D004479 ORTHO05D005597 1.3e-44 185.3 262 41.6
FvH4_4g04880 Fragaria vesca HOM05D004479 ORTHO05D005597 1.3e-44 185.3 279 39.8
Sabra10G0196900 Salix brachista HOM05D004479 ORTHO05D005597 1.3e-44 185.3 285 41.4
C09p30960 Brassica napus HOM05D004479 ORTHO05D005597 1.7e-44 184.9 262 41.6
BolC9t55955H Brassica oleracea HOM05D004479 ORTHO05D005597 1.7e-44 184.9 262 41.6
Potri.010G253100 Populus trichocarpa HOM05D004479 ORTHO05D005597 2.2e-44 184.5 285 40.7
Aqoxy7G02788 Aquilegia oxysepala HOM05D004479 ORTHO05D005597 2.9e-44 184.1 282 41.1
CDE02G4004 Ceratophyllum demersum HOM05D004479 ORTHO05D005597 2.9e-44 184.1 198 52.0
COL.COLO4_31168 Corchorus olitorius HOM05D004479 ORTHO05D005597 3.7e-44 183.7 274 42.0
A09p24080 Brassica napus HOM05D004479 ORTHO05D005597 4.9e-44 183.3 262 41.2
BraA09t38008Z Brassica rapa HOM05D004479 ORTHO05D005597 4.9e-44 183.3 262 41.2
BcaB07g30687 Brassica carinata HOM05D004479 ORTHO05D005597 6.4e-44 183.0 203 48.3
Sc12g0011150 Simmondsia chinensis HOM05D004479 ORTHO05D005597 6.4e-44 183.0 211 47.9
FAN22G0181 Fragaria x ananassa HOM05D004479 ORTHO05D005597 8.3e-44 182.6 272 39.7
CARHR213680 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.1e-43 182.2 203 47.8
FAN17G0751 Fragaria x ananassa HOM05D004479 ORTHO05D005597 1.1e-43 182.2 272 40.1
THA.LOC104800314 Tarenaya hassleriana HOM05D004479 ORTHO05D005597 1.4e-43 181.8 200 47.0
AL5G12650 Arabidopsis lyrata HOM05D004479 ORTHO05D005597 1.9e-43 181.4 201 47.8
MBI13_g01743_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 1.9e-43 181.4 465 40.4
Carub.0005s0192 Capsella rubella HOM05D004479 ORTHO05D005597 2.4e-43 181.0 201 47.8
MBI13_g34036_MAGBIO Magnolia biondii HOM05D004479 ORTHO05D005597 2.4e-43 181.0 479 40.5
Aa31LG2G7330 Aethionema arabicum HOM05D004479 ORTHO05D005597 3.2e-43 180.6 217 45.6
CANSAT78G0411 Cannabis sativa HOM05D004479 ORTHO05D005597 3.2e-43 180.6 198 49.0
Thecc.06G058800 Theobroma cacao HOM05D004479 ORTHO05D005597 3.2e-43 180.6 265 43.0
AT2G03070 Arabidopsis thaliana HOM05D004479 ORTHO05D005597 4.1e-43 180.3 201 47.3
Manes.06G177300 Manihot esculenta HOM05D004479 ORTHO05D005597 4.1e-43 180.3 214 44.9
TWI09G1491 Tripterygium wilfordii HOM05D004479 ORTHO05D005597 7.0e-43 179.5 405 41.7
TAR626G0959 Trochodendron aralioides HOM05D004479 ORTHO05D005597 7.0e-43 179.5 215 47.0
vmacro18747 Vaccinium macrocarpon HOM05D004479 ORTHO05D005597 9.2e-43 179.1 222 46.4
Medtr5g013930 Medicago truncatula HOM05D004479 ORTHO05D005597 1.2e-42 178.7 204 46.6
PSO063G0217 Papaver somniferum HOM05D004479 ORTHO05D005597 1.2e-42 178.7 209 48.8
PSO170G2367 Papaver somniferum HOM05D004479 ORTHO05D005597 1.2e-42 178.7 209 48.8
Gohir.A01G221776 Gossypium hirsutum HOM05D004479 ORTHO05D005597 2.0e-42 177.9 198 48.0
Duzib192G0061 Durio zibethinus HOM05D004479 ORTHO05D005597 2.7e-42 177.6 198 48.0
PSO384G0383 Papaver somniferum HOM05D004479 ORTHO05D005597 3.5e-42 177.2 261 42.1
Atru.chr1.2695 Acer truncatum HOM05D004479 ORTHO05D005597 6.0e-42 176.4 272 41.2
ClCG07G014640 Citrullus lanatus HOM05D004479 ORTHO05D005597 6.0e-42 176.4 198 48.0
CsaV3_3G030520 Cucumis sativus L. HOM05D004479 ORTHO05D005597 6.0e-42 176.4 261 39.8
Psat5g288040 Pisum sativum HOM05D004479 ORTHO05D005597 6.0e-42 176.4 193 48.2
CAN.G790.12 Capsicum annuum HOM05D004479 ORTHO05D005597 7.8e-42 176.0 211 48.8
Thhalv10004003m.g Eutrema salsugineum HOM05D004479 ORTHO05D005597 7.8e-42 176.0 268 39.6
Gorai.010G142700 Gossypium raimondii HOM05D004479 ORTHO05D005597 7.8e-42 176.0 198 48.0
Phvul.005G185100 Phaseolus vulgaris HOM05D004479 ORTHO05D005597 7.8e-42 176.0 201 49.3
arahy.Tifrunner.gnm1.ann1.HYUF3S Arachis hypogaea HOM05D004479 ORTHO05D005597 1.0e-41 175.6 204 47.5
arahy.Tifrunner.gnm1.ann1.SFLF9H Arachis hypogaea HOM05D004479 ORTHO05D005597 1.0e-41 175.6 204 47.5
MELO3C026710.2 Cucumis melo HOM05D004479 ORTHO05D005597 1.3e-41 175.3 261 39.8
PGSC0003DMG400009164 Solanum tuberosum HOM05D004479 ORTHO05D005597 1.3e-41 175.3 198 50.5
HPP92_008247 Vanilla planifolia HOM05D004479 ORTHO05D005597 1.3e-41 175.3 211 46.0
AUR62001343 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.7e-41 174.9 208 45.7
Dinv09182 Davidia involucrata HOM05D004479 ORTHO05D005597 1.7e-41 174.9 271 42.1
EL10Ac7g18162 Beta vulgaris HOM05D004479 ORTHO05D005597 2.3e-41 174.5 208 46.6
Nitab4.5_0004918g0010 Nicotiana tabacum HOM05D004479 ORTHO05D005597 3.0e-41 174.1 198 50.0
Peaxi162Scf00038g02656 Petunia axillaris HOM05D004479 ORTHO05D005597 3.0e-41 174.1 198 50.0
Rhsim08G0249800 Rhododendron simsii HOM05D004479 ORTHO05D005597 3.9e-41 173.7 284 41.2
SGA_v2.0_scaffold122G33268 Striga asiatica HOM05D004479 ORTHO05D005597 3.9e-41 173.7 290 40.3
TPR.G5557 Trifolium pratense HOM05D004479 ORTHO05D005597 3.9e-41 173.7 204 45.1
Os03g0423800 Oryza sativa ssp. japonica HOM05D004479 ORTHO05D005597 5.0e-41 173.3 197 49.2
Zm00001eb320420 Zea mays HOM05D004479 ORTHO05D005597 6.6e-41 172.9 415 34.9
Ca_21726_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 8.6e-41 172.6 204 44.6
Sed0022371 Sechium edule HOM05D004479 ORTHO05D005597 8.6e-41 172.6 209 45.0
Hund18598 Selenicereus undatus HOM05D004479 ORTHO05D005597 8.6e-41 172.6 202 46.5
AUR62025661 Chenopodium quinoa HOM05D004479 ORTHO05D005597 1.1e-40 172.2 199 47.7
Cc04_g00200 Coffea canephora HOM05D004479 ORTHO05D005597 1.1e-40 172.2 194 51.0
Solyc03g123960.3 Solanum lycopersicum HOM05D004479 ORTHO05D005597 1.1e-40 172.2 198 49.5
Glyma.12G188300 Glycine max HOM05D004479 ORTHO05D005597 1.5e-40 171.8 195 48.2
Oeu049641.1 Olea europaea HOM05D004479 ORTHO05D005597 1.9e-40 171.4 222 44.1
Actinidia21882 Actinidia chinensis HOM05D004479 ORTHO05D005597 3.3e-40 170.6 270 41.9
Migut.I01194 Erythranthe guttata HOM05D004479 ORTHO05D005597 3.3e-40 170.6 222 45.5
Hma1.2p1_1111F.1_g258400 Hydrangea macrophylla HOM05D004479 ORTHO05D005597 3.3e-40 170.6 277 39.7
PGR119G2289 Punica granatum HOM05D004479 ORTHO05D005597 3.3e-40 170.6 529 34.4
Ah.15g094320 Amaranthus hybridus HOM05D004479 ORTHO05D005597 4.3e-40 170.2 276 41.3
Nitab4.5_0005664g0060 Nicotiana tabacum HOM05D004479 ORTHO05D005597 4.3e-40 170.2 212 46.2
VMungo1080G0276 Vigna mungo HOM05D004479 ORTHO05D005597 4.3e-40 170.2 201 48.3
Ciclev10025265m.g Citrus clementina HOM05D004479 ORTHO05D005597 5.6e-40 169.9 273 40.3
QL05p084035 Quercus lobata HOM05D004479 ORTHO05D005597 5.6e-40 169.9 287 38.7
AagrBONN_evm.TU.Sc2ySwM_117.2251 Anthoceros agrestis HOM05D004479 ORTHO05D005597 9.5e-40 169.1 228 42.5
RcHm_v2.0_Chr4g0395721 Rosa chinensis HOM05D004479 ORTHO05D005597 9.5e-40 169.1 244 42.6
MSTRG.10879 Avicennia marina HOM05D004479 ORTHO05D005597 2.8e-39 167.5 271 40.2
Lj3g0018425 Lotus japonicus HOM05D004479 ORTHO05D005597 2.8e-39 167.5 196 46.4
CSS0019442 Camellia sinensis var. sinensis HOM05D004479 ORTHO05D005597 3.6e-39 167.2 222 44.1
Haze_16264 Corylus avellana HOM05D004479 ORTHO05D005597 3.6e-39 167.2 175 50.3
Glyma.13G372700 Glycine max HOM05D004479 ORTHO05D005597 3.6e-39 167.2 218 44.5
ECA234G3188 Erigeron canadensis HOM05D001810 ORTHO05D005662 8.1e-39 166.0 223 44.8
Nitab4.5_0002664g0040 Nicotiana tabacum HOM05D004479 ORTHO05D005597 1.1e-38 165.6 230 44.3
BcaC06g31203 Brassica carinata HOM05D004479 ORTHO05D005597 1.4e-38 165.2 218 42.2
Lj6C65T2 Lonicera japonica HOM05D004479 ORTHO05D005597 1.4e-38 165.2 270 39.6
Sopen03g041690 Solanum pennellii HOM05D004479 ORTHO05D005597 1.4e-38 165.2 190 50.0
DCAR_030619 Daucus carota HOM05D004479 ORTHO05D005597 2.3e-38 164.5 204 48.0
Hund18609 Selenicereus undatus HOM05D004479 ORTHO05D005597 4.0e-38 163.7 218 43.1
GSVIVG01029540001 Vitis vinifera HOM05D004479 ORTHO05D005597 2.0e-37 161.4 549 36.6
BcaC06g34021 Brassica carinata HOM05D004479 ORTHO05D005597 2.6e-37 161.0 220 42.3
CBR_g41305 Chara braunii HOM05D004479 ORTHO05D005597 2.6e-37 161.0 288 38.5
HanXRQChr12g0359691 Helianthus annuus HOM05D004479 ORTHO05D005597 2.6e-37 161.0 199 46.7
unitig_748.g8028 Utricularia gibba HOM05D004479 ORTHO05D005597 2.6e-37 161.0 422 32.2
BolC7t43874H Brassica oleracea HOM05D004479 ORTHO05D005597 1.7e-36 158.3 213 42.7
SalBow6G0079 Salvia bowleyana HOM05D004479 ORTHO05D005597 2.9e-36 157.5 237 40.5
Cfa002151 Carpinus fangiana HOM05D004479 ORTHO05D005597 3.7e-36 157.1 183 47.5
Gohir.A06G118600 Gossypium hirsutum HOM05D004479 ORTHO05D005597 4.9e-36 156.8 265 39.6
AagrBONN_evm.TU.Sc2ySwM_117.1357 Anthoceros agrestis HOM05D004479 ORTHO05D005597 6.4e-36 156.4 233 39.5
BraA06t27217Z Brassica rapa HOM05D004479 ORTHO05D005597 6.4e-36 156.4 213 41.8
Cpa.g.sc1515.2 Carica papaya HOM05D004479 ORTHO05D005597 1.1e-35 155.6 175 46.3
Lsat_1_v5_gn_5_137281 Lactuca sativa HOM05D004479 ORTHO05D005597 7.1e-35 152.9 264 40.5
Dinv37783 Davidia involucrata HOM05D004479 ORTHO05D005597 1.0e-33 149.1 172 49.4
A06p43310 Brassica napus HOM05D004479 ORTHO05D005597 1.6e-31 141.7 188 42.6
PSO836G0001 Papaver somniferum HOM05D004479 ORTHO05D005597 4.7e-23 113.6 157 43.9
SEGI_11469 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 1.4e-22 112.1 146 43.8
C07p33640 Brassica napus HOM05D004479 ORTHO05D005597 4.4e-21 107.1 156 42.3
Oeu062492.1 Olea europaea HOM05D004479 ORTHO05D005597 9.9e-21 105.9 209 36.4
CARHR145470 Cardamine hirsuta HOM05D004479 ORTHO05D005597 1.3e-17 95.5 126 43.7
Ca_04816_v3 Cicer arietinum L. HOM05D004479 ORTHO05D005597 8.1e-15 86.3 207 29.0
Gohir.D06G122500 Gossypium hirsutum HOM05D004479 ORTHO05D005597 1.1e-14 85.9 122 40.2
Psat1g118080 Pisum sativum HOM05D004479 ORTHO05D005597 1.1e-11 75.9 79 49.4
SEGI_18721 Sequoiadendron giganteum HOM05D004479 ORTHO05D005597 8.7e-09 66.2 57 52.6
Actinidia21652 Actinidia chinensis HOM05D004479 ORTHO05D005597 8.1e-07 59.7 44 61.4
QL03p033126 Quercus lobata HOM05D004479 ORTHO05D005597 8.1e-07 59.7 94 38.3


User provided reference genes

Program Settings