Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI39435 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-44 182.2 85 100.0
SHI39437 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-44 182.2 85 100.0
SHI04168 Sapria himalayana HOM05D000002 ORTHO05D004433 1.2e-26 122.9 57 100.0
SHI18425 Sapria himalayana HOM05D000002 ORTHO05D004433 1.6e-26 122.5 57 98.2
SHI03937 Sapria himalayana HOM05D000002 ORTHO05D004433 2.1e-26 122.1 77 77.9
SHI44323 Sapria himalayana HOM05D000002 ORTHO05D000001 4.6e-26 120.9 57 94.7
SHI00406 Sapria himalayana HOM05D000002 ORTHO05D004433 6.0e-26 120.6 57 96.5
SHI14609 Sapria himalayana HOM05D000002 ORTHO05D000001 7.9e-26 120.2 57 98.2
SHI38827 Sapria himalayana HOM05D000002 ORTHO05D004433 7.9e-26 120.2 57 96.5
SHI47496 Sapria himalayana HOM05D000002 ORTHO05D004433 7.9e-26 120.2 57 98.2
SHI07649 Sapria himalayana HOM05D000002 ORTHO05D004433 1.0e-25 119.8 57 98.2
SHI16256 Sapria himalayana HOM05D000002 ORTHO05D004433 1.3e-25 119.4 57 96.5
SHI45609 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-25 119.4 57 96.5
SHI10489 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-25 119.0 57 96.5
SHI32313 Sapria himalayana HOM05D000002 ORTHO05D004433 1.8e-25 119.0 57 96.5
SHI10029 Sapria himalayana HOM05D000002 ORTHO05D004433 2.3e-25 118.6 57 94.7
SHI21269 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-25 117.5 61 90.2
SHI32919 Sapria himalayana HOM05D000002 ORTHO05D004433 5.1e-25 117.5 57 94.7
SHI12756 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-24 116.3 57 96.5
SHI43060 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-24 116.3 57 96.5
SHI18328 Sapria himalayana HOM05D000002 ORTHO05D000001 5.6e-24 114.0 57 91.2
MD01G1096700 Malus domestica HOM05D000002 ORTHO05D000001 1.3e-23 112.8 62 82.3
MD14G1034300 Malus domestica HOM05D000038 ORTHO05D004433 4.0e-22 107.8 62 80.6
SHI45691 Sapria himalayana HOM05D000002 ORTHO05D004433 5.8e-21 104.0 47 100.0
ECA232G4651 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.9e-20 100.9 64 70.3
ECA238G4719 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.2e-19 98.2 62 72.6
SHI05549 Sapria himalayana HOM05D000002 ORTHO05D004433 7.1e-19 97.1 62 74.2
ECA238G3349 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.6e-18 95.9 62 71.0
ECA233G2071 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.5e-18 94.7 61 68.9
Prupe.7G032100 Prunus persica HOM05D000002 ORTHO05D004433 6.0e-18 94.0 62 71.0
CSS0021348 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D004433 1.8e-17 92.4 55 74.5
ECA233G1874 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-17 92.4 62 62.9
ECA236G5067 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-17 92.4 62 66.1
ECA240G4274 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-17 92.4 62 62.9
ECA246G2496 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-17 92.4 62 62.9
ECA248G0687 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-17 92.4 57 73.7
ECA247G1586 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.3e-17 92.0 57 68.4
ECA246G3093 Erigeron canadensis HOM05D001467 ORTHO05D001214 8.7e-17 90.1 62 67.7
MD01G1222200 Malus domestica HOM05D000002 ORTHO05D004433 8.7e-17 90.1 47 80.9
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-16 89.7 62 61.3
ECA247G3536 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.1e-16 89.7 62 67.7
SHI06746 Sapria himalayana HOM05D000002 ORTHO05D004433 1.1e-16 89.7 40 100.0
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.3e-16 88.2 62 61.3
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-15 84.3 57 61.4
ECA246G0537 Erigeron canadensis HOM05D000002 ORTHO05D000001 4.8e-15 84.3 57 64.9
ECA246G5102 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.4e-14 82.8 57 64.9
Sopen00g007880 Solanum pennellii HOM05D000002 ORTHO05D004433 1.4e-14 82.8 62 59.7
ECA248G3794 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.8e-14 82.4 62 56.5
SHI18909 Sapria himalayana HOM05D000002 ORTHO05D004433 6.9e-14 80.5 36 94.4
ECA238G4301 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.0e-12 76.6 58 51.7
Prupe.2G033500 Prunus persica HOM05D000002 ORTHO05D004433 3.8e-12 74.7 42 73.8
Glyma.07G117100 Glycine max HOM05D000002 ORTHO05D004433 5.0e-12 74.3 58 58.6
TAR610G0003 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.9e-11 72.4 57 59.6
SHI49936 Sapria himalayana HOM05D000002 ORTHO05D000001 4.2e-11 71.2 33 100.0
SHI04823 Sapria himalayana HOM05D000002 ORTHO05D004433 4.6e-10 67.8 33 97.0
SHI51732 Sapria himalayana HOM05D000002 ORTHO05D000001 2.3e-09 65.5 30 96.7
Gorai.012G076500 Gossypium raimondii HOM05D000002 ORTHO05D004433 5.1e-09 64.3 41 68.3
PGR044G0355 Punica granatum HOM05D000097 ORTHO05D000041 4.3e-08 61.2 53 50.9
PGR044G1025 Punica granatum HOM05D000097 ORTHO05D000041 1.7e-07 59.3 51 51.0
SHI22389 Sapria himalayana HOM05D000002 ORTHO05D004433 1.7e-07 59.3 33 84.8
PGR044G1072 Punica granatum HOM05D000097 ORTHO05D000041 2.2e-07 58.9 41 56.1
Nn8g40511 Nelumbo nucifera HOM05D000002 ORTHO05D000001 2.8e-07 58.5 49 49.0
Ah.16g108610 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.7e-07 58.2 48 54.2
Dinv02026 Davidia involucrata HOM05D028709 ORTHO05D004433 3.7e-07 58.2 45 53.3
Sopen11g022370 Solanum pennellii HOM05D000036 ORTHO05D005472 3.7e-07 58.2 58 44.8
PGR044G1153 Punica granatum HOM05D000097 ORTHO05D000041 4.8e-07 57.8 41 56.1
Ah.01g008310 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.3e-07 57.4 48 54.2
BolC8t49584H Brassica oleracea HOM05D000002 ORTHO05D004433 6.3e-07 57.4 58 44.8
Ah.16g106880 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.4e-06 56.2 39 56.4
Ah.03g145180 Amaranthus hybridus HOM05D000002 ORTHO05D004433 1.8e-06 55.8 47 53.2
CiPaw.08G098800 Carya illinoinensis HOM05D000002 ORTHO05D004433 2.4e-06 55.5 35 68.6
Ah.04g159010 Amaranthus hybridus HOM05D000002 ORTHO05D004433 3.1e-06 55.1 47 53.2
Nn1g06847 Nelumbo nucifera HOM05D000002 ORTHO05D004433 3.1e-06 55.1 46 52.2
Cc04_g10140 Coffea canephora HOM05D000002 ORTHO05D004433 4.1e-06 54.7 38 60.5
Sopen03g007650 Solanum pennellii HOM05D000002 ORTHO05D004433 4.1e-06 54.7 39 56.4
Ah.13g069620 Amaranthus hybridus HOM05D000002 ORTHO05D004433 6.9e-06 53.9 47 51.1
Nn2g13681 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.9e-06 53.9 38 63.2
Nn4g25779 Nelumbo nucifera HOM05D000002 ORTHO05D004433 6.9e-06 53.9 49 44.9
Sopen03g027090 Solanum pennellii HOM05D000002 ORTHO05D002065 6.9e-06 53.9 58 43.1
Sopen05g013900 Solanum pennellii HOM05D000004 ORTHO05D000002 6.9e-06 53.9 52 42.3


User provided reference genes

Program Settings