Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 3.5e-115 418.3 211 100.0
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 4.9e-53 211.8 167 65.3
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 2.5e-49 199.5 172 61.6
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 2.5e-49 199.5 172 61.6
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 5.7e-49 198.4 174 60.9
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 7.4e-49 198.0 171 59.6
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 9.6e-49 197.6 174 62.6
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 2.1e-48 196.4 171 62.6
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.8e-48 196.1 173 60.7
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 3.7e-48 195.7 167 59.9
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 8.2e-48 194.5 173 59.0
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 8.2e-48 194.5 175 61.7
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 1.8e-47 193.4 171 57.9
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 2.4e-47 193.0 174 57.5
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 3.1e-47 192.6 167 60.5
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 4.1e-47 192.2 179 58.7
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 4.1e-47 192.2 172 61.0
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 6.9e-47 191.4 205 53.2
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 9.0e-47 191.0 179 59.8
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 1.5e-46 190.3 172 58.7
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 1.5e-46 190.3 167 60.5
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 2.6e-46 189.5 167 59.9
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.8e-46 188.3 169 58.0
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.0e-45 187.6 179 57.0
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.3e-45 187.2 172 55.2
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.3e-45 187.2 168 59.5
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.3e-45 187.2 168 59.5
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.3e-45 187.2 168 59.5
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 1.7e-45 186.8 131 71.8
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.7e-45 186.8 176 57.4
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 2.2e-45 186.4 172 54.7
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.2e-45 186.4 166 59.0
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 2.2e-45 186.4 183 55.2
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 2.9e-45 186.0 171 58.5
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 2.9e-45 186.0 178 55.6
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 2.9e-45 186.0 177 59.9
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 2.9e-45 186.0 143 65.0
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 3.8e-45 185.7 178 56.7
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 5.0e-45 185.3 176 59.7
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 8.4e-45 184.5 168 59.5
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 8.4e-45 184.5 183 59.0
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 8.4e-45 184.5 183 59.0
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 1.1e-44 184.1 189 55.6
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 1.4e-44 183.7 169 58.0
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 1.4e-44 183.7 176 59.7
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 1.4e-44 183.7 175 57.7
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 1.4e-44 183.7 168 57.7
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 1.4e-44 183.7 184 54.3
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 1.9e-44 183.3 185 55.1
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 1.9e-44 183.3 174 55.2
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 1.9e-44 183.3 170 57.6
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 1.9e-44 183.3 173 59.5
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 2.5e-44 183.0 182 58.2
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.5e-44 183.0 172 57.6
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 3.2e-44 182.6 183 56.3
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 3.2e-44 182.6 188 55.9
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 4.2e-44 182.2 181 57.5
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 4.2e-44 182.2 175 58.9
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 4.2e-44 182.2 169 57.4
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 5.5e-44 181.8 181 56.9
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 5.5e-44 181.8 182 56.6
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 5.5e-44 181.8 169 58.6
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 1.6e-43 180.3 170 57.6
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 1.6e-43 180.3 184 53.3
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 2.1e-43 179.9 131 67.2
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 2.7e-43 179.5 171 58.5
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 2.7e-43 179.5 174 57.5
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 4.6e-43 178.7 164 57.9
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 6.1e-43 178.3 176 55.1
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 7.9e-43 177.9 175 57.7
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 1.0e-42 177.6 176 54.5
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.0e-42 177.6 170 57.6
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 1.0e-42 177.6 170 57.6
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 1.3e-42 177.2 168 53.6
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 1.3e-42 177.2 178 55.1
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 1.8e-42 176.8 170 58.8
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.9e-42 175.6 170 58.8
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 5.1e-42 175.3 184 54.3
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 6.7e-42 174.9 177 55.9
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 6.7e-42 174.9 170 58.2
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 8.7e-42 174.5 180 55.6
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 8.7e-42 174.5 181 55.8
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 1.1e-41 174.1 146 63.7
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 1.1e-41 174.1 180 55.6
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 1.1e-41 174.1 181 55.8
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 1.1e-41 174.1 180 55.6
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 1.5e-41 173.7 143 64.3
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 1.5e-41 173.7 183 51.9
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 1.5e-41 173.7 177 52.0
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 1.9e-41 173.3 131 66.4
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 4.3e-41 172.2 177 56.5
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 4.3e-41 172.2 174 55.2
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 1.3e-40 170.6 176 55.1
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 1.3e-40 170.6 174 54.6
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 1.3e-40 170.6 177 52.5
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 3.7e-40 169.1 136 64.7
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 8.2e-40 167.9 200 48.0
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 1.4e-39 167.2 132 66.7
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 1.4e-39 167.2 174 53.4
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 1.4e-39 167.2 174 53.4
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 1.4e-39 167.2 177 54.8
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 2.4e-39 166.4 174 53.4
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 3.1e-39 166.0 138 60.1
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 4.1e-39 165.6 169 56.2
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.3e-39 165.2 109 73.4
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 9.0e-39 164.5 178 53.9
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 2.6e-38 162.9 168 54.8
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 2.6e-38 162.9 147 59.2
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 7.7e-38 161.4 191 51.8
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 1.3e-37 160.6 128 65.6
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 1.4e-36 157.1 131 61.1
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 2.5e-36 156.4 174 52.9
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 4.2e-36 155.6 149 57.7
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 3.9e-34 149.1 150 55.3
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 8.8e-34 147.9 172 52.3
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 9.7e-33 144.4 188 43.1
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 2.2e-32 143.3 188 43.1
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 1.5e-30 137.1 110 63.6
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 3.4e-30 136.0 90 74.4
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.7e-29 133.7 174 48.3
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 5.0e-29 132.1 102 67.6
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 6.5e-29 131.7 109 58.7
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 1.6e-27 127.1 142 52.1
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 1.8e-26 123.6 109 56.9
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 3.0e-26 122.9 104 60.6
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 3.0e-26 122.9 104 61.5
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 5.1e-26 122.1 137 51.8
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 9.7e-25 117.9 114 52.6
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 1.3e-24 117.5 103 58.3
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 1.7e-24 117.1 101 60.4
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 2.8e-24 116.3 103 57.3
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 8.2e-24 114.8 73 80.8
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 4.1e-23 112.5 99 54.5
vmacro18600 Vaccinium macrocarpon HOM05D004626 ORTHO05D005185 1.7e-21 107.1 129 48.8
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 3.8e-21 105.9 91 59.3
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 5.0e-21 105.5 96 55.2
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 8.5e-21 104.8 101 55.4
Nitab4.5_0006375g0050 Nicotiana tabacum HOM05D004626 ORTHO05D005185 5.5e-20 102.1 96 61.5
VMungo0251G0963 Vigna mungo HOM05D004626 ORTHO05D005185 5.5e-20 102.1 91 59.3
Lalb_Chr22g0353781 Lupinus albus HOM05D004626 ORTHO05D005185 2.1e-19 100.1 75 65.3
Nn1g04969 Nelumbo nucifera HOM05D004626 ORTHO05D005185 2.7e-19 99.8 113 47.8
Potri.007G093100 Populus trichocarpa HOM05D004626 ORTHO05D005185 1.8e-18 97.1 167 39.5
TPR.G6292 Trifolium pratense HOM05D004626 ORTHO05D005185 5.2e-18 95.5 88 58.0
Gohir.A02G143100 Gossypium hirsutum HOM05D004626 ORTHO05D005185 5.7e-17 92.0 64 73.4
Gohir.D03G037250 Gossypium hirsutum HOM05D004626 ORTHO05D005185 2.8e-16 89.7 67 68.7
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 2.8e-16 89.7 98 44.9
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 3.1e-15 86.3 85 49.4
SalBow3G4134 Salvia bowleyana HOM05D004626 ORTHO05D005185 7.0e-15 85.1 118 44.1
Medtr8g090225 Medicago truncatula HOM05D004626 ORTHO05D005185 9.1e-15 84.7 81 55.6
Ciclev10029799m.g Citrus clementina HOM05D004626 ORTHO05D005185 2.9e-13 79.7 83 49.4
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 2.7e-11 73.2 86 39.5
Medtr3g079680 Medicago truncatula HOM05D004626 ORTHO05D005185 3.6e-11 72.8 117 42.7
Cre17.g727350 Chlamydomonas reinhardtii HOM05D004626 ORTHO05D005185 7.0e-07 58.5 83 39.8


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