Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI33971 Sapria himalayana HOM05D012851 ORTHO05D001576 3.7e-67 258.1 131 100.0
SHI05501 Sapria himalayana HOM05D000827 ORTHO05D001576 2.2e-27 125.9 88 77.3
SHI46732 Sapria himalayana HOM05D012851 ORTHO05D001576 1.0e-19 100.5 118 52.5
SHI41620 Sapria himalayana HOM05D012851 ORTHO05D001576 1.3e-19 100.1 88 64.8
SHI47950 Sapria himalayana HOM05D012851 ORTHO05D001576 1.7e-19 99.8 88 63.6
SHI49570 Sapria himalayana HOM05D012851 ORTHO05D001576 8.4e-19 97.4 88 63.6
SHI40002 Sapria himalayana HOM05D012851 ORTHO05D001576 3.5e-17 92.0 88 62.5
SHI47666 Sapria himalayana HOM05D012851 ORTHO05D001576 3.3e-15 85.5 78 57.7
SHI51277 Sapria himalayana HOM05D012851 ORTHO05D001576 3.1e-13 79.0 69 60.9
SHI44155 Sapria himalayana HOM05D012851 ORTHO05D001576 4.5e-12 75.1 63 65.1
Sabra09G0081500 Salix brachista HOM05D000827 ORTHO05D001576 1.8e-08 63.2 130 40.8
Thecc.02G095500 Theobroma cacao HOM05D000827 ORTHO05D001576 5.1e-08 61.6 69 58.0
Gohir.D02G212000 Gossypium hirsutum HOM05D000827 ORTHO05D001576 8.7e-08 60.8 74 50.0
Gorai.005G239900 Gossypium raimondii HOM05D000827 ORTHO05D001576 8.7e-08 60.8 74 50.0
Aa31LG10G4470 Aethionema arabicum HOM05D000827 ORTHO05D001576 1.1e-07 60.5 86 43.0
Gohir.A03G191000 Gossypium hirsutum HOM05D000827 ORTHO05D001576 1.1e-07 60.5 74 50.0
Atru.chr5.2817 Acer truncatum HOM05D000827 ORTHO05D001576 1.5e-07 60.1 88 46.6
Potri.009G106700 Populus trichocarpa HOM05D000827 ORTHO05D001576 1.9e-07 59.7 85 50.6
Manes.15G143600 Manihot esculenta HOM05D000827 ORTHO05D001576 3.3e-07 58.9 83 47.0
QL11p038399 Quercus lobata HOM05D000827 ORTHO05D001576 3.3e-07 58.9 64 57.8
CSS0024154 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001576 5.7e-07 58.2 59 52.5
CSS0046507 Camellia sinensis var. sinensis HOM05D000827 ORTHO05D001576 5.7e-07 58.2 59 52.5
Carub.0001s3871 Capsella rubella HOM05D000827 ORTHO05D001576 9.7e-07 57.4 89 44.9
Potri.004G145200 Populus trichocarpa HOM05D000827 ORTHO05D001576 9.7e-07 57.4 74 54.1
Sc14g0001700 Simmondsia chinensis HOM05D000827 ORTHO05D001576 9.7e-07 57.4 76 46.1
BolC5t33344H Brassica oleracea HOM05D000827 ORTHO05D001576 1.3e-06 57.0 129 36.4
Sabra04G0096200 Salix brachista HOM05D000827 ORTHO05D001576 1.6e-06 56.6 74 54.1
THA.LOC104811358 Tarenaya hassleriana HOM05D000827 ORTHO05D001576 1.6e-06 56.6 59 57.6
AL1G56870 Arabidopsis lyrata HOM05D000827 ORTHO05D001576 2.2e-06 56.2 59 54.2
Eucgr.I01179 Eucalyptus grandis HOM05D000827 ORTHO05D001576 2.2e-06 56.2 87 41.4
BcaB06g25962 Brassica carinata HOM05D000827 ORTHO05D001576 2.8e-06 55.8 59 54.2
AT1G49520 Arabidopsis thaliana HOM05D000827 ORTHO05D001576 3.7e-06 55.5 89 43.8
Sp1g36380 Schrenkiella parvula HOM05D000827 ORTHO05D001576 4.8e-06 55.1 84 45.2
CARHR039550 Cardamine hirsuta HOM05D000827 ORTHO05D001576 6.3e-06 54.7 84 44.0
Ciclev10028659m.g Citrus clementina HOM05D000827 ORTHO05D001576 6.3e-06 54.7 61 54.1
Prupe.8G116100 Prunus persica HOM05D000827 ORTHO05D001576 6.3e-06 54.7 70 51.4
Sp3g17160 Schrenkiella parvula HOM05D000827 ORTHO05D001576 8.2e-06 54.3 59 54.2


User provided reference genes

Program Settings