Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 1.6e-109 399.4 196 100.0
Sabra16G0062800 Salix brachista HOM05D007056 ORTHO05D008278 1.0e-28 131.0 76 76.3
AUR62011999 Chenopodium quinoa HOM05D007056 ORTHO05D008278 2.3e-28 129.8 73 78.1
Manes.08G042900 Manihot esculenta HOM05D007056 ORTHO05D008278 2.3e-28 129.8 71 78.9
Potri.016G060000 Populus trichocarpa HOM05D007056 ORTHO05D008278 2.3e-28 129.8 76 76.3
Actinidia38590 Actinidia chinensis HOM05D007056 ORTHO05D008278 3.9e-28 129.0 72 79.2
CSS0008084 Camellia sinensis var. sinensis HOM05D007056 ORTHO05D008278 3.9e-28 129.0 72 79.2
Dinv16370 Davidia involucrata HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 77.8
Gohir.D04G089300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 77.8
Gorai.012G099400 Gossypium raimondii HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 77.8
Lj2A365G87 Lonicera japonica HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 76.4
Rhsim04G0094900 Rhododendron simsii HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 77.8
SGA_v2.0_scaffold69G23055 Striga asiatica HOM05D007056 ORTHO05D008278 5.1e-28 128.6 72 77.8
PGR142G3072 Punica granatum HOM05D007056 ORTHO05D008278 6.7e-28 128.3 72 77.8
MD14G1054600 Malus domestica HOM05D007056 ORTHO05D008278 8.7e-28 127.9 72 76.4
AL3G23650 Arabidopsis lyrata HOM05D007056 ORTHO05D008278 1.1e-27 127.5 76 73.7
arahy.Tifrunner.gnm1.ann1.DK1M71 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.1e-27 127.5 72 76.4
arahy.Tifrunner.gnm1.ann1.LTU6F0 Arachis hypogaea HOM05D007056 ORTHO05D008278 1.1e-27 127.5 72 76.4
Nn2g15729 Nelumbo nucifera HOM05D007056 ORTHO05D008278 1.1e-27 127.5 72 76.4
Hund24814 Selenicereus undatus HOM05D007056 ORTHO05D008278 1.1e-27 127.5 73 75.3
EL10Ac3g06891 Beta vulgaris HOM05D007056 ORTHO05D008278 1.5e-27 127.1 72 77.8
Cc06_g15700 Coffea canephora HOM05D007056 ORTHO05D008278 1.5e-27 127.1 72 75.0
Duzib093G0790 Durio zibethinus HOM05D007056 ORTHO05D008278 1.5e-27 127.1 72 76.4
FAN14G2508 Fragaria x ananassa HOM05D007056 ORTHO05D008278 1.5e-27 127.1 68 80.9
Glyma.19G149400 Glycine max HOM05D007056 ORTHO05D008278 1.5e-27 127.1 72 76.4
Cpa.g.sc85.61 Carica papaya HOM05D007056 ORTHO05D008278 1.9e-27 126.7 68 80.9
AUR62015338 Chenopodium quinoa HOM05D007056 ORTHO05D008278 1.9e-27 126.7 73 76.7
AT3G12040 Arabidopsis thaliana HOM05D007056 ORTHO05D008278 2.5e-27 126.3 76 73.7
Eucgr.K01848 Eucalyptus grandis HOM05D007056 ORTHO05D008278 2.5e-27 126.3 72 76.4
FvH4_6g21980 Fragaria vesca HOM05D007056 ORTHO05D008278 2.5e-27 126.3 72 76.4
MBI19_g17420_MAGBIO Magnolia biondii HOM05D007056 ORTHO05D008278 2.5e-27 126.3 72 75.0
Peaxi162Scf00249g01221 Petunia axillaris HOM05D007056 ORTHO05D008278 2.5e-27 126.3 68 82.4
Ah.04g152820 Amaranthus hybridus HOM05D007056 ORTHO05D008278 3.3e-27 125.9 73 75.3
ATR0598G297 Amborella trichopoda HOM05D007056 ORTHO05D008278 3.3e-27 125.9 72 76.4
CANSAT64G0992 Cannabis sativa HOM05D007056 ORTHO05D008278 3.3e-27 125.9 68 82.4
Ca_08534_v3 Cicer arietinum L. HOM05D007056 ORTHO05D008278 3.3e-27 125.9 72 73.6
FAN02G0430 Fragaria x ananassa HOM05D007056 ORTHO05D008278 3.3e-27 125.9 64 84.4
Thecc.05G174400 Theobroma cacao HOM05D007056 ORTHO05D008278 3.3e-27 125.9 72 75.0
TWI77G0776 Tripterygium wilfordii HOM05D007056 ORTHO05D008278 3.3e-27 125.9 63 85.7
CiPaw.09G028900 Carya illinoinensis HOM05D007056 ORTHO05D008278 4.3e-27 125.6 72 76.4
Lj1g0028043 Lotus japonicus HOM05D007056 ORTHO05D008278 4.3e-27 125.6 72 76.4
Nitab4.5_0001079g0030 Nicotiana tabacum HOM05D007056 ORTHO05D008278 4.3e-27 125.6 72 77.8
QL07p024320 Quercus lobata HOM05D007056 ORTHO05D008278 4.3e-27 125.6 68 80.9
QL07p024358 Quercus lobata HOM05D007056 ORTHO05D008278 4.3e-27 125.6 68 80.9
Sp3g10270 Schrenkiella parvula HOM05D007056 ORTHO05D008278 4.3e-27 125.6 76 73.7
Sed0027134 Sechium edule HOM05D007056 ORTHO05D008278 4.3e-27 125.6 72 77.8
CARHR086600 Cardamine hirsuta HOM05D007056 ORTHO05D008278 5.6e-27 125.2 76 73.7
Gohir.A04G057300 Gossypium hirsutum HOM05D007056 ORTHO05D008278 5.6e-27 125.2 72 76.4
Os02g0774500 Oryza sativa ssp. japonica HOM05D007056 ORTHO05D008278 5.6e-27 125.2 76 73.7
TAR369G0080 Trochodendron aralioides HOM05D007056 ORTHO05D008278 5.6e-27 125.2 68 80.9
Carub.0003s1138 Capsella rubella HOM05D007056 ORTHO05D008278 7.4e-27 124.8 76 72.4
Cfa020149 Carpinus fangiana HOM05D007056 ORTHO05D008278 9.6e-27 124.4 72 76.4
Ciclev10012466m.g Citrus clementina HOM05D007056 ORTHO05D008278 9.6e-27 124.4 72 76.4
Lalb_Chr18g0048001 Lupinus albus HOM05D007056 ORTHO05D008278 9.6e-27 124.4 72 75.0
Zm00001eb256530 Zea mays HOM05D007056 ORTHO05D008278 1.3e-26 124.0 76 72.4
Aqoxy2G00097 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.6e-26 123.6 72 70.8
Aqoxy3G01855 Aquilegia oxysepala HOM05D007056 ORTHO05D008278 1.6e-26 123.6 72 70.8
CsaV3_3G038650 Cucumis sativus L. HOM05D007056 ORTHO05D008278 1.6e-26 123.6 72 73.6
VMungo1383G1827 Vigna mungo HOM05D007056 ORTHO05D008278 1.6e-26 123.6 70 77.1
AagrBONN_evm.TU.Sc2ySwM_344.2853 Anthoceros agrestis HOM05D007056 ORTHO05D008278 2.1e-26 123.2 76 73.7
Prupe.7G080200 Prunus persica HOM05D007056 ORTHO05D008278 2.1e-26 123.2 72 76.4
RcHm_v2.0_Chr3g0479281 Rosa chinensis HOM05D007056 ORTHO05D008278 2.1e-26 123.2 72 75.0
Solyc10g080560.2 Solanum lycopersicum HOM05D007056 ORTHO05D008278 2.1e-26 123.2 68 80.9
Sopen10g031100 Solanum pennellii HOM05D007056 ORTHO05D008278 2.1e-26 123.2 68 80.9
PGSC0003DMG400023706 Solanum tuberosum HOM05D007056 ORTHO05D008278 2.1e-26 123.2 68 80.9
FAN09G4108 Fragaria x ananassa HOM05D007056 ORTHO05D008278 2.8e-26 122.9 68 79.4
Phvul.001G143900 Phaseolus vulgaris HOM05D007056 ORTHO05D008278 2.8e-26 122.9 72 75.0
Atru.chr8.1149 Acer truncatum HOM05D007056 ORTHO05D008278 3.7e-26 122.5 72 73.6
COL.COLO4_05956 Corchorus olitorius HOM05D007056 ORTHO05D008278 3.7e-26 122.5 72 75.0
A05p37300 Brassica napus HOM05D007056 ORTHO05D008278 6.2e-26 121.7 76 72.4
BraA05t22526Z Brassica rapa HOM05D007056 ORTHO05D008278 6.2e-26 121.7 76 72.4
DCAR_019779 Daucus carota HOM05D007056 ORTHO05D008278 6.2e-26 121.7 72 73.6
Thhalv10021378m.g Eutrema salsugineum HOM05D007056 ORTHO05D008278 6.2e-26 121.7 76 71.1
BcaB06g25552 Brassica carinata HOM05D007056 ORTHO05D008278 8.2e-26 121.3 76 72.4
ECA248G2501 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.2e-26 121.3 72 75.0
BcaC05g29295 Brassica carinata HOM05D007056 ORTHO05D008278 1.1e-25 120.9 72 75.0
C05p55770 Brassica napus HOM05D007056 ORTHO05D008278 1.1e-25 120.9 72 75.0
BolC5t34244H Brassica oleracea HOM05D007056 ORTHO05D008278 1.1e-25 120.9 72 75.0
CAN.G128.50 Capsicum annuum HOM05D007056 ORTHO05D008278 1.1e-25 120.9 72 75.0
THA.LOC104809936 Tarenaya hassleriana HOM05D007056 ORTHO05D008278 1.1e-25 120.9 72 75.0
BcaB06g25551 Brassica carinata HOM05D007056 ORTHO05D008278 1.4e-25 120.6 67 80.6
HanXRQChr01g0010031 Helianthus annuus HOM05D007056 ORTHO05D008278 1.4e-25 120.6 83 67.5
HPP92_004381 Vanilla planifolia HOM05D007056 ORTHO05D008278 3.1e-25 119.4 72 73.6
CDE06G2434 Ceratophyllum demersum HOM05D007056 ORTHO05D008278 4.0e-25 119.0 68 73.5
Sc13g0002370 Simmondsia chinensis HOM05D007056 ORTHO05D008278 4.0e-25 119.0 68 77.9
GSVIVG01033475001 Vitis vinifera HOM05D007056 ORTHO05D008278 5.3e-25 118.6 72 72.2
Aa31sc80G100 Aethionema arabicum HOM05D007056 ORTHO05D008278 6.9e-25 118.2 76 69.7
ECA248G2516 Erigeron canadensis HOM05D007056 ORTHO05D008278 9.0e-25 117.9 67 79.1
Medtr7g093540 Medicago truncatula HOM05D007056 ORTHO05D008278 1.2e-24 117.5 68 76.5
Lsat_1_v5_gn_5_165300 Lactuca sativa HOM05D007056 ORTHO05D008278 2.0e-24 116.7 72 72.2
unitig_27.g25110 Utricularia gibba HOM05D007056 ORTHO05D008278 2.0e-24 116.7 72 72.2
TPR.G35780 Trifolium pratense HOM05D007056 ORTHO05D008278 2.6e-24 116.3 68 75.0
SEGI_25756 Sequoiadendron giganteum HOM05D007056 ORTHO05D008278 7.6e-24 114.8 72 69.4
Psat3g067080 Pisum sativum HOM05D007056 ORTHO05D008278 1.3e-23 114.0 72 70.8
Psat3g067120 Pisum sativum HOM05D007056 ORTHO05D008278 1.7e-23 113.6 67 76.1
SMO146G0068 Selaginella moellendorffii HOM05D007056 ORTHO05D008278 1.7e-23 113.6 72 70.8
Mapoly0003s0280 Marchantia polymorpha HOM05D007056 ORTHO05D008278 4.9e-23 112.1 70 71.4
Haze_20013 Corylus avellana HOM05D007056 ORTHO05D008278 6.5e-23 111.7 89 60.7
CBR_g48019 Chara braunii HOM05D000019 ORTHO05D000002 4.2e-22 109.0 77 63.6
Pp3c1_41490 Physcomitrium patens HOM05D007056 ORTHO05D008278 6.7e-20 101.7 72 63.9
vmacro22110 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.8e-18 95.5 83 59.0
Psat3g067040 Pisum sativum HOM05D007056 ORTHO05D008278 5.0e-15 85.5 55 67.3
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 5.0e-15 85.5 81 61.7
ECA233G2032 Erigeron canadensis HOM05D007056 ORTHO05D008278 8.5e-15 84.7 43 81.4
SHI34245 Sapria himalayana HOM05D000105 ORTHO05D000023 8.5e-15 84.7 62 77.4
SHI31277 Sapria himalayana HOM05D002876 ORTHO05D008278 3.2e-14 82.8 62 74.2
SHI20252 Sapria himalayana HOM05D002287 ORTHO05D002588 7.2e-14 81.6 59 78.0
PSO541G5037 Papaver somniferum HOM05D007056 ORTHO05D008278 2.1e-13 80.1 43 79.1
PSO675G9168 Papaver somniferum HOM05D007056 ORTHO05D008278 2.1e-13 80.1 43 79.1
PRCOL_00003183 Prasinoderma coloniale HOM05D007056 ORTHO05D008278 1.0e-12 77.8 53 66.0
ClCG10G017660 Citrullus lanatus HOM05D007056 ORTHO05D008278 1.4e-12 77.4 43 79.1
ECA248G3402 Erigeron canadensis HOM05D000009 ORTHO05D000008 1.4e-12 77.4 43 79.1
SHI15282 Sapria himalayana HOM05D012376 ORTHO05D006881 1.8e-12 77.0 107 48.6
SHI18051 Sapria himalayana HOM05D000169 ORTHO05D004780 1.5e-11 73.9 63 66.7
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 4.3e-11 72.4 147 42.9
vmacro22990 Vaccinium macrocarpon HOM05D007056 ORTHO05D008278 4.3e-11 72.4 33 90.9
SHI08665 Sapria himalayana HOM05D000004 ORTHO05D009727 5.7e-11 72.0 106 45.3
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 9.7e-11 71.2 74 60.8
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 1.4e-09 67.4 85 49.4
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 2.4e-09 66.6 82 57.3
SHI21057 Sapria himalayana HOM05D000555 ORTHO05D000646 2.4e-09 66.6 41 80.5
Oeu024494.3 Olea europaea HOM05D007056 ORTHO05D008278 5.3e-09 65.5 78 48.7
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 2.6e-08 63.2 93 45.2
SHI05595 Sapria himalayana HOM05D001544 ORTHO05D002732 1.4e-06 57.4 63 60.3
SHI22307 Sapria himalayana HOM05D003655 ORTHO05D004065 1.4e-06 57.4 90 44.4
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 1.9e-06 57.0 50 70.0
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.9e-06 57.0 47 70.2
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 2.5e-06 56.6 35 85.7
MELO3C009610.2 Cucumis melo HOM05D007056 ORTHO05D008278 7.2e-06 55.1 32 71.9
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 9.4e-06 54.7 63 60.3


User provided reference genes

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