Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI29515 Sapria himalayana HOM05D049097 ORTHO05D010324 4.7e-73 277.7 135 100.0
SHI35588 Sapria himalayana HOM05D049097 ORTHO05D010324 1.5e-31 139.8 84 78.6
CANSAT16G0055 Cannabis sativa HOM05D008193 ORTHO05D010324 8.7e-11 70.9 47 76.6
MBI04_g15068_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 8.7e-11 70.9 47 76.6
Potri.007G061841 Populus trichocarpa HOM05D008193 ORTHO05D010324 8.7e-11 70.9 47 76.6
RcHm_v2.0_MTg0498331 Rosa chinensis HOM05D008193 ORTHO05D010324 8.7e-11 70.9 47 76.6
Sed0007015 Sechium edule HOM05D008193 ORTHO05D010324 8.7e-11 70.9 47 76.6
Dinv06739 Davidia involucrata HOM05D008193 ORTHO05D010324 1.1e-10 70.5 47 74.5
Oeu040256.1 Olea europaea HOM05D008193 ORTHO05D010324 1.1e-10 70.5 47 74.5
Aa31csc464G50 Aethionema arabicum HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
AL6G41420 Arabidopsis lyrata HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
AT2G07696 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
ATMG01270 Arabidopsis thaliana HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BcaC09g49584 Brassica carinata HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BolSC28t60333H Brassica oleracea HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BolSC28t60437H Brassica oleracea HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BraSC48t46277Z Brassica rapa HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BraSC77t46639Z Brassica rapa HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
BraSC77t46658Z Brassica rapa HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
CARHR283470 Cardamine hirsuta HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
Sp3g25900 Schrenkiella parvula HOM05D008193 ORTHO05D010324 4.3e-10 68.6 47 74.5
MBI07_g31516_MAGBIO Magnolia biondii HOM05D008193 ORTHO05D010324 5.6e-10 68.2 47 74.5
Nn003s41380 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.6e-10 68.2 47 74.5
Nn1g09926 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.6e-10 68.2 47 74.5
Nn1g10017 Nelumbo nucifera HOM05D008193 ORTHO05D010324 5.6e-10 68.2 47 74.5
Cpa.g.sc263.27 Carica papaya HOM05D008193 ORTHO05D010324 7.4e-10 67.8 47 74.5
Cc00_g01650 Coffea canephora HOM05D008193 ORTHO05D010324 9.6e-10 67.4 47 72.3
CsaV3_UNG209710 Cucumis sativus L. HOM05D008193 ORTHO05D010324 9.6e-10 67.4 47 72.3
AUR62041694 Chenopodium quinoa HOM05D008193 ORTHO05D010324 2.1e-09 66.2 47 72.3
AUR62042350 Chenopodium quinoa HOM05D008193 ORTHO05D010324 2.1e-09 66.2 47 72.3
Gorai.001G165300 Gossypium raimondii HOM05D008193 ORTHO05D010324 2.1e-09 66.2 47 70.2
Rhsim10G0162200 Rhododendron simsii HOM05D008193 ORTHO05D010324 2.1e-09 66.2 47 66.0
Sc11g0004460 Simmondsia chinensis HOM05D008193 ORTHO05D010324 2.1e-09 66.2 47 72.3
Aqoxy3G01138 Aquilegia oxysepala HOM05D008193 ORTHO05D010324 2.8e-09 65.9 45 75.6
vmacro19456 Vaccinium macrocarpon HOM05D008193 ORTHO05D010324 2.8e-09 65.9 47 63.8
AUR62026431 Chenopodium quinoa HOM05D008193 ORTHO05D010324 3.7e-09 65.5 45 71.1
MELO3C015621.2 Cucumis melo HOM05D008193 ORTHO05D010324 3.7e-09 65.5 47 72.3
DCAR_032456 Daucus carota HOM05D008193 ORTHO05D010324 4.8e-09 65.1 47 70.2
MELO3C023756.2 Cucumis melo HOM05D008193 ORTHO05D010324 6.2e-09 64.7 43 72.1
Os12g0524750 Oryza sativa ssp. japonica HOM05D008193 ORTHO05D010324 8.2e-09 64.3 45 73.3
Hund27588 Selenicereus undatus HOM05D008193 ORTHO05D010324 1.1e-08 63.9 47 70.2
Hund27818 Selenicereus undatus HOM05D008193 ORTHO05D010324 1.1e-08 63.9 47 70.2
Hund28868 Selenicereus undatus HOM05D008193 ORTHO05D010324 1.1e-08 63.9 47 70.2
Hund28881 Selenicereus undatus HOM05D008193 ORTHO05D010324 1.1e-08 63.9 47 70.2
Hund29086 Selenicereus undatus HOM05D008193 ORTHO05D010324 1.1e-08 63.9 47 70.2
AUR62026427 Chenopodium quinoa HOM05D008193 ORTHO05D010324 2.4e-08 62.8 43 76.7
CDE02G0514 Ceratophyllum demersum HOM05D008193 ORTHO05D010324 3.1e-08 62.4 47 66.0
CsaV3_5G020360 Cucumis sativus L. HOM05D008193 ORTHO05D010324 9.0e-08 60.8 47 66.0
Lsat_1_v5_gn_4_134101 Lactuca sativa HOM05D008193 ORTHO05D010324 2.2e-06 56.2 46 58.7
PSO017G1916 Papaver somniferum HOM05D008193 ORTHO05D010324 4.9e-06 55.1 42 64.3
PSO170G6554 Papaver somniferum HOM05D008193 ORTHO05D010324 4.9e-06 55.1 42 64.3


User provided reference genes

Program Settings