Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI28043 Sapria himalayana HOM05D003395 ORTHO05D004087 7.1e-84 313.9 162 100.0
SHI10456 Sapria himalayana HOM05D003395 ORTHO05D004087 1.3e-48 196.8 213 58.2
SHI27325 Sapria himalayana HOM05D003395 ORTHO05D004087 1.7e-40 169.9 167 58.7
SHI34713 Sapria himalayana HOM05D003395 ORTHO05D004087 1.4e-39 166.8 187 54.0
Manes.11G065000 Manihot esculenta HOM05D003395 ORTHO05D004087 7.2e-36 154.5 195 50.3
CsaV3_3G040740 Cucumis sativus L. HOM05D003395 ORTHO05D004087 2.7e-35 152.5 195 47.7
CANSAT80G2433 Cannabis sativa HOM05D003395 ORTHO05D004087 4.7e-35 151.8 195 48.2
Haze_19811 Corylus avellana HOM05D003395 ORTHO05D004087 7.9e-35 151.0 195 48.2
Haze_09905 Corylus avellana HOM05D003395 ORTHO05D004087 1.8e-34 149.8 192 47.9
Haze_19814 Corylus avellana HOM05D003395 ORTHO05D004087 1.8e-34 149.8 195 48.2
ClCG10G015680 Citrullus lanatus HOM05D003395 ORTHO05D004087 3.0e-34 149.1 195 46.7
SHI20623 Sapria himalayana HOM05D003395 ORTHO05D004087 3.0e-34 149.1 164 54.9
Atru.chr1.1149 Acer truncatum HOM05D003395 ORTHO05D004087 3.9e-34 148.7 193 48.2
MELO3C009808.2 Cucumis melo HOM05D003395 ORTHO05D004087 8.8e-34 147.5 195 46.7
Lj1A1126G58 Lonicera japonica HOM05D003395 ORTHO05D004087 1.1e-33 147.1 195 47.2
Lj1A1128G63 Lonicera japonica HOM05D003395 ORTHO05D004087 1.1e-33 147.1 195 47.2
Potri.015G026200 Populus trichocarpa HOM05D003395 ORTHO05D004087 2.0e-33 146.4 195 47.7
Ciclev10004294m.g Citrus clementina HOM05D003395 ORTHO05D004087 2.6e-33 146.0 195 47.2
vmacro09059 Vaccinium macrocarpon HOM05D003395 ORTHO05D004087 4.4e-33 145.2 195 46.2
RcHm_v2.0_Chr3g0483381 Rosa chinensis HOM05D003395 ORTHO05D004087 7.4e-33 144.4 195 45.6
Eucgr.K02007 Eucalyptus grandis HOM05D003395 ORTHO05D004087 9.7e-33 144.1 195 45.1
Gohir.D11G326700 Gossypium hirsutum HOM05D003395 ORTHO05D004087 9.7e-33 144.1 195 44.6
Sed0021456 Sechium edule HOM05D003395 ORTHO05D004087 9.7e-33 144.1 195 44.6
Ca_01074_v3 Cicer arietinum L. HOM05D003395 ORTHO05D004087 1.3e-32 143.7 195 45.6
Psat5g301400 Pisum sativum HOM05D003395 ORTHO05D004087 1.3e-32 143.7 195 46.2
arahy.Tifrunner.gnm1.ann1.13YWQX Arachis hypogaea HOM05D003395 ORTHO05D004087 1.7e-32 143.3 195 44.6
arahy.Tifrunner.gnm1.ann1.C8DH2G Arachis hypogaea HOM05D003395 ORTHO05D004087 1.7e-32 143.3 195 44.6
TPR.G37242 Trifolium pratense HOM05D003395 ORTHO05D004087 1.7e-32 143.3 195 46.2
TAR633G2151 Trochodendron aralioides HOM05D003395 ORTHO05D004087 1.7e-32 143.3 195 46.7
Gorai.007G357300 Gossypium raimondii HOM05D003395 ORTHO05D004087 2.2e-32 142.9 195 44.6
Medtr2g103370 Medicago truncatula HOM05D003395 ORTHO05D004087 2.2e-32 142.9 195 45.1
Rhsim04G0105700 Rhododendron simsii HOM05D003395 ORTHO05D004087 2.2e-32 142.9 195 45.6
FAN09G3838 Fragaria x ananassa HOM05D003395 ORTHO05D004087 2.8e-32 142.5 195 45.1
Cpa.g.sc182.8 Carica papaya HOM05D003395 ORTHO05D004087 3.7e-32 142.1 192 46.9
Dinv39652 Davidia involucrata HOM05D003395 ORTHO05D004087 3.7e-32 142.1 194 47.4
Duzib128G1779 Durio zibethinus HOM05D003395 ORTHO05D004087 3.7e-32 142.1 195 45.6
FvH4_6g24390 Fragaria vesca HOM05D003395 ORTHO05D004087 3.7e-32 142.1 195 45.1
FAN05G3635 Fragaria x ananassa HOM05D003395 ORTHO05D004087 3.7e-32 142.1 195 45.1
QL07p003024 Quercus lobata HOM05D003395 ORTHO05D004087 4.8e-32 141.7 195 46.7
VMungo1080G0039 Vigna mungo HOM05D003395 ORTHO05D004087 4.8e-32 141.7 195 45.1
CiPaw.09G039800 Carya illinoinensis HOM05D003395 ORTHO05D004087 6.3e-32 141.4 195 45.6
Glyma.13G363900 Glycine max HOM05D003395 ORTHO05D004087 6.3e-32 141.4 195 45.6
MD12G1080600 Malus domestica HOM05D003395 ORTHO05D004087 8.2e-32 141.0 195 46.7
DCAR_020506 Daucus carota HOM05D003395 ORTHO05D004087 1.1e-31 140.6 195 47.2
Glyma.15G010000 Glycine max HOM05D003395 ORTHO05D004087 1.1e-31 140.6 195 45.6
CSS0000776 Camellia sinensis var. sinensis HOM05D003395 ORTHO05D004087 3.1e-31 139.0 195 44.6
Nn7g36372 Nelumbo nucifera HOM05D003395 ORTHO05D004087 3.1e-31 139.0 194 45.9
Potri.012G034800 Populus trichocarpa HOM05D003395 ORTHO05D004087 3.1e-31 139.0 195 46.7
Sabra12G0023800 Salix brachista HOM05D003395 ORTHO05D004087 3.1e-31 139.0 195 45.6
Peaxi162Scf00130g00723 Petunia axillaris HOM05D003395 ORTHO05D004087 4.1e-31 138.7 195 45.6
Phvul.005G175500 Phaseolus vulgaris HOM05D003395 ORTHO05D004087 4.1e-31 138.7 195 44.1
GSVIVG01033240001 Vitis vinifera HOM05D003395 ORTHO05D004087 4.1e-31 138.7 195 44.6
FAN02G0096 Fragaria x ananassa HOM05D003395 ORTHO05D004087 7.0e-31 137.9 195 44.1
Thecc.05G151200 Theobroma cacao HOM05D003395 ORTHO05D004087 7.0e-31 137.9 195 45.1
TWI74G0608 Tripterygium wilfordii HOM05D003395 ORTHO05D004087 7.0e-31 137.9 195 44.6
ATR0320G031 Amborella trichopoda HOM05D003395 ORTHO05D004087 9.1e-31 137.5 195 45.1
Sopen04g008350 Solanum pennellii HOM05D003395 ORTHO05D004087 1.2e-30 137.1 195 45.1
CAN.G676.13 Capsicum annuum HOM05D003395 ORTHO05D004087 3.5e-30 135.6 195 45.1
Lj3g0013293 Lotus japonicus HOM05D003395 ORTHO05D004087 3.5e-30 135.6 195 44.6
Lalb_Chr14g0373701 Lupinus albus HOM05D003395 ORTHO05D004087 3.5e-30 135.6 194 44.3
Lalb_Chr24g0395581 Lupinus albus HOM05D003395 ORTHO05D004087 3.5e-30 135.6 195 43.6
Carub.0004s2387 Capsella rubella HOM05D003395 ORTHO05D004087 5.9e-30 134.8 195 43.1
ECA236G0559 Erigeron canadensis HOM05D003395 ORTHO05D004087 5.9e-30 134.8 195 44.6
SHI34459 Sapria himalayana HOM05D003395 ORTHO05D004087 7.7e-30 134.4 156 51.9
Solyc04g016240.3 Solanum lycopersicum HOM05D003395 ORTHO05D004087 7.7e-30 134.4 195 44.1
Sabra15G0019300 Salix brachista HOM05D003395 ORTHO05D004087 1.0e-29 134.0 207 43.0
AL4G39710 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 1.3e-29 133.7 195 42.1
AT2G41620 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 2.2e-29 132.9 195 41.5
MD14G1076700 Malus domestica HOM05D003395 ORTHO05D004087 2.2e-29 132.9 177 46.9
Sabra15G0021800 Salix brachista HOM05D003395 ORTHO05D004087 2.2e-29 132.9 207 43.0
COL.COLO4_22300 Corchorus olitorius HOM05D003395 ORTHO05D004087 3.8e-29 132.1 195 44.6
Nitab4.5_0006870g0040 Nicotiana tabacum HOM05D003395 ORTHO05D004087 3.8e-29 132.1 195 43.6
CARHR136710 Cardamine hirsuta HOM05D003395 ORTHO05D004087 5.0e-29 131.7 195 41.5
Cc06_g17870 Coffea canephora HOM05D003395 ORTHO05D004087 8.5e-29 131.0 195 43.6
Aqoxy2G00226 Aquilegia oxysepala HOM05D003395 ORTHO05D004087 1.1e-28 130.6 195 42.6
BcaC02g07302 Brassica carinata HOM05D003395 ORTHO05D004087 1.1e-28 130.6 195 42.1
BolC4t28411H Brassica oleracea HOM05D003395 ORTHO05D004087 1.1e-28 130.6 195 42.1
Thhalv10016231m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.5e-28 130.2 195 41.0
A04p31720 Brassica napus HOM05D003395 ORTHO05D004087 2.5e-28 129.4 195 41.5
C04p69140 Brassica napus HOM05D003395 ORTHO05D004087 2.5e-28 129.4 195 41.5
BraA04t18629Z Brassica rapa HOM05D003395 ORTHO05D004087 2.5e-28 129.4 195 41.5
Sc19g0006620 Simmondsia chinensis HOM05D003395 ORTHO05D004087 2.5e-28 129.4 196 42.3
AT3G57350 Arabidopsis thaliana HOM05D003395 ORTHO05D004087 3.2e-28 129.0 195 41.5
HanXRQChr04g0125091 Helianthus annuus HOM05D003395 ORTHO05D004087 3.2e-28 129.0 195 43.6
PSO210G1603 Papaver somniferum HOM05D003395 ORTHO05D004087 3.2e-28 129.0 195 43.1
PSO210G2967 Papaver somniferum HOM05D003395 ORTHO05D004087 3.2e-28 129.0 195 43.1
SalBow6G3234 Salvia bowleyana HOM05D003395 ORTHO05D004087 3.2e-28 129.0 195 43.1
BcaB06g29192 Brassica carinata HOM05D003395 ORTHO05D004087 4.2e-28 128.6 195 41.0
Sp4g23860 Schrenkiella parvula HOM05D003395 ORTHO05D004087 4.2e-28 128.6 195 41.5
SalBow1G6094 Salvia bowleyana HOM05D003395 ORTHO05D004087 1.2e-27 127.1 195 42.6
Hma1.2p1_0556F.1_g178050 Hydrangea macrophylla HOM05D003395 ORTHO05D004087 1.6e-27 126.7 224 40.6
THA.LOC104817509 Tarenaya hassleriana HOM05D003395 ORTHO05D004087 1.6e-27 126.7 195 41.0
Aa31LG1G23630 Aethionema arabicum HOM05D003395 ORTHO05D004087 2.1e-27 126.3 195 41.0
Nitab4.5_0000826g0280 Nicotiana tabacum HOM05D003395 ORTHO05D004087 2.7e-27 125.9 195 42.6
Carub.0005s2420 Capsella rubella HOM05D003395 ORTHO05D004087 3.6e-27 125.6 195 41.0
MSTRG.26130 Avicennia marina HOM05D003395 ORTHO05D004087 4.7e-27 125.2 195 42.6
AL5G38890 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 8.0e-27 124.4 195 39.5
AUR62026086 Chenopodium quinoa HOM05D003395 ORTHO05D004087 1.0e-26 124.0 195 41.5
Lsat_1_v5_gn_8_82001 Lactuca sativa HOM05D003395 ORTHO05D004087 1.4e-26 123.6 196 42.3
Eucgr.K01721 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.8e-26 123.2 156 48.1
MBI13_g36815_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 1.8e-26 123.2 192 43.2
HPP92_001326 Vanilla planifolia HOM05D003395 ORTHO05D004087 1.8e-26 123.2 194 41.2
EL10Ac3g07130 Beta vulgaris HOM05D003395 ORTHO05D004087 2.3e-26 122.9 195 40.5
Oeu008171.1 Olea europaea HOM05D003395 ORTHO05D004087 2.3e-26 122.9 185 42.7
Sp5g05250 Schrenkiella parvula HOM05D003395 ORTHO05D004087 3.0e-26 122.5 195 39.5
Ah.13g076590 Amaranthus hybridus HOM05D003395 ORTHO05D004087 4.0e-26 122.1 195 40.5
FAN14G3261 Fragaria x ananassa HOM05D003395 ORTHO05D004087 4.0e-26 122.1 163 45.4
SHI32287 Sapria himalayana HOM05D003395 ORTHO05D004087 5.2e-26 121.7 91 67.0
Migut.K00101 Erythranthe guttata HOM05D003395 ORTHO05D004087 6.7e-26 121.3 195 40.5
Os03g0349000 Oryza sativa ssp. japonica HOM05D003395 ORTHO05D004087 2.6e-25 119.4 191 40.8
SHI25400 Sapria himalayana HOM05D003395 ORTHO05D004087 5.7e-25 118.2 173 49.7
BcaC07g40053 Brassica carinata HOM05D003395 ORTHO05D004087 2.8e-24 115.9 195 36.9
C08p32740 Brassica napus HOM05D003395 ORTHO05D004087 2.8e-24 115.9 195 36.9
BolC8t50885H Brassica oleracea HOM05D003395 ORTHO05D004087 2.8e-24 115.9 195 36.9
A09p50250 Brassica napus HOM05D003395 ORTHO05D004087 3.7e-24 115.5 195 37.4
BraA09t40475Z Brassica rapa HOM05D003395 ORTHO05D004087 3.7e-24 115.5 195 37.4
Thhalv10005836m.g Eutrema salsugineum HOM05D003395 ORTHO05D004087 1.8e-23 113.2 169 40.2
unitig_22.g5792 Utricularia gibba HOM05D003395 ORTHO05D004087 2.0e-22 109.8 197 39.6
SEGI_19146 Sequoiadendron giganteum HOM05D003395 ORTHO05D004087 4.5e-22 108.6 177 38.4
PGSC0003DMG400012709 Solanum tuberosum HOM05D003395 ORTHO05D004087 7.7e-22 107.8 184 40.8
SHI44367 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-21 106.3 79 68.4
SHI45533 Sapria himalayana HOM05D003395 ORTHO05D004087 2.2e-21 106.3 79 68.4
Gohir.A11G310000 Gossypium hirsutum HOM05D003395 ORTHO05D004087 2.9e-21 105.9 96 55.2
Eucgr.K01765 Eucalyptus grandis HOM05D003395 ORTHO05D004087 1.1e-20 104.0 148 42.6
AUR62024500 Chenopodium quinoa HOM05D003395 ORTHO05D004087 2.5e-20 102.8 157 41.4
CAN.G624.32 Capsicum annuum HOM05D003395 ORTHO05D004087 1.6e-19 100.1 167 40.7
SHI40120 Sapria himalayana HOM05D003395 ORTHO05D004087 3.0e-18 95.9 76 65.8
SHI34448 Sapria himalayana HOM05D003395 ORTHO05D004087 8.8e-18 94.4 113 50.4
CDE11G0065 Ceratophyllum demersum HOM05D003395 ORTHO05D004087 7.5e-17 91.3 155 38.7
MBI13_g36804_MAGBIO Magnolia biondii HOM05D003395 ORTHO05D004087 9.8e-17 90.9 171 40.4
SHI37781 Sapria himalayana HOM05D003395 ORTHO05D004087 3.7e-16 89.0 105 48.6
SHI33206 Sapria himalayana HOM05D003395 ORTHO05D004087 4.1e-15 85.5 181 38.7
Pp3c6_19740 Physcomitrium patens HOM05D003395 ORTHO05D004087 1.2e-14 84.0 193 30.1
Zm00001eb016760 Zea mays HOM05D003395 ORTHO05D004087 1.7e-13 80.1 154 40.3
Mapoly0069s0022 Marchantia polymorpha HOM05D003395 ORTHO05D004087 1.5e-12 77.0 174 29.9
SMO203G0013 Selaginella moellendorffii HOM05D003395 ORTHO05D004087 1.5e-12 77.0 181 30.4
AL4G39910 Arabidopsis lyrata HOM05D003395 ORTHO05D004087 5.7e-09 65.1 62 56.5
Lj3g0025487 Lotus japonicus HOM05D003395 ORTHO05D004087 3.7e-08 62.4 62 56.5
SHI37551 Sapria himalayana HOM05D003395 ORTHO05D004087 1.1e-07 60.8 57 59.6
SHI32634 Sapria himalayana HOM05D003395 ORTHO05D004087 5.9e-06 55.1 87 41.4


User provided reference genes

Program Settings