Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI23384 Sapria himalayana HOM05D000034 ORTHO05D000037 5.2e-40 167.2 78 100.0
SHI09403 Sapria himalayana HOM05D000034 ORTHO05D000037 1.6e-17 92.4 54 72.2
SHI11206 Sapria himalayana HOM05D000034 ORTHO05D000037 1.4e-16 89.4 59 69.5
SHI10579 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-15 86.3 59 64.4
Nn7g38140 Nelumbo nucifera HOM05D000034 ORTHO05D000037 5.7e-15 84.0 59 62.7
SHI20142 Sapria himalayana HOM05D000034 ORTHO05D000037 7.5e-15 83.6 59 59.3
SHI20928 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-14 82.8 56 64.3
SHI03909 Sapria himalayana HOM05D000034 ORTHO05D000037 4.9e-14 80.9 52 63.5
SHI05889 Sapria himalayana HOM05D000034 ORTHO05D000037 8.3e-14 80.1 49 67.3
SHI06119 Sapria himalayana HOM05D000034 ORTHO05D000037 8.3e-14 80.1 49 71.4
SHI50258 Sapria himalayana HOM05D000034 ORTHO05D000037 1.8e-13 79.0 56 64.3
HanXRQChr03g0077651 Helianthus annuus HOM05D000034 ORTHO05D000037 3.2e-13 78.2 56 60.7
SHI20365 Sapria himalayana HOM05D000034 ORTHO05D000037 4.1e-13 77.8 59 64.4
PSO210G0503 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-12 76.3 56 55.4
Aqoxy1G03317 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 2.7e-12 75.1 56 58.9
ECA232G1773 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.5e-12 74.7 56 55.4
ECA238G2489 Erigeron canadensis HOM05D000034 ORTHO05D000037 5.9e-12 73.9 56 53.6
PSO832G4219 Papaver somniferum HOM05D000034 ORTHO05D000037 7.8e-12 73.6 56 55.4
Aqoxy3G01210 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.3e-11 72.8 56 53.6
ECA247G4088 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-11 72.8 47 61.7
HanXRQChr10g0279481 Helianthus annuus HOM05D000034 ORTHO05D000285 1.3e-11 72.8 56 53.6
Rhsim05G0142800 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-11 72.4 56 55.4
Rhsim08G0056200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.7e-11 72.4 56 55.4
HanXRQChr12g0382961 Helianthus annuus HOM05D000034 ORTHO05D000037 2.3e-11 72.0 56 53.6
Rhsim06G0160000 Rhododendron simsii HOM05D000034 ORTHO05D000285 2.3e-11 72.0 56 55.4
PSO063G4406 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-11 71.6 56 55.4
PSO063G6700 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-11 71.6 56 55.4
PSO210G4734 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-11 71.6 56 55.4
PSO541G0934 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-11 71.6 56 55.4
PSO782G3468 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-11 71.6 56 55.4
SHI11653 Sapria himalayana HOM05D000034 ORTHO05D000037 3.9e-11 71.2 50 66.0
PSO170G6726 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-11 70.9 56 53.6
PSO210G5707 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-11 70.9 56 53.6
PSO478G0302 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-11 70.9 56 53.6
PSO675G1246 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-11 70.9 56 55.4
PSO801G0789 Papaver somniferum HOM05D000034 ORTHO05D000037 5.0e-11 70.9 56 53.6
SHI03288 Sapria himalayana HOM05D000034 ORTHO05D000037 5.0e-11 70.9 52 57.7
SHI10898 Sapria himalayana HOM05D000034 ORTHO05D000037 5.0e-11 70.9 52 57.7
HanXRQChr07g0185941 Helianthus annuus HOM05D000034 ORTHO05D000037 6.6e-11 70.5 56 51.8
Aqoxy3G02330 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 8.6e-11 70.1 56 51.8
PSO210G7822 Papaver somniferum HOM05D000034 ORTHO05D000037 8.6e-11 70.1 56 53.6
PSO017G4039 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-10 69.7 56 55.4
PSO384G0215 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-10 69.7 47 59.6
Atru.chr10.1596 Acer truncatum HOM05D000034 ORTHO05D000037 1.5e-10 69.3 56 50.0
Atru.chr2.2393 Acer truncatum HOM05D000034 ORTHO05D000037 1.9e-10 68.9 56 50.0
PSO210G7101 Papaver somniferum HOM05D000034 ORTHO05D000037 1.9e-10 68.9 47 61.7
SHI38235 Sapria himalayana HOM05D000034 ORTHO05D000037 3.3e-10 68.2 51 56.9
Rhsim09G0068200 Rhododendron simsii HOM05D000034 ORTHO05D000037 5.6e-10 67.4 50 56.0
Aqoxy7G02664 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.2e-09 66.2 56 48.2
PSO561G0039 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-09 66.2 47 57.4
PSO675G8710 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-09 66.2 47 59.6
CANSAT01G2719 Cannabis sativa HOM05D000034 ORTHO05D000037 2.1e-09 65.5 56 46.4
TWI75G1289 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 2.1e-09 65.5 56 50.0
Atru.chr6.1500 Acer truncatum HOM05D000034 ORTHO05D000037 2.8e-09 65.1 60 48.3
Atru.chr7.804 Acer truncatum HOM05D000034 ORTHO05D000037 2.8e-09 65.1 60 45.0
SHI19211 Sapria himalayana HOM05D000034 ORTHO05D000037 2.8e-09 65.1 59 52.5
PSO210G2784 Papaver somniferum HOM05D000034 ORTHO05D000037 3.6e-09 64.7 56 50.0
SHI22347 Sapria himalayana HOM05D000034 ORTHO05D000037 3.6e-09 64.7 54 50.0
CANSAT64G2926 Cannabis sativa HOM05D000034 ORTHO05D000037 8.0e-09 63.5 56 44.6
ECA233G1549 Erigeron canadensis HOM05D000034 ORTHO05D000037 8.0e-09 63.5 56 46.4
ECA246G3575 Erigeron canadensis HOM05D001106 ORTHO05D000037 8.0e-09 63.5 56 48.2
TWI14G0766 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.0e-09 63.5 56 48.2
TWI39G1305 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 8.0e-09 63.5 56 48.2
HanXRQChr10g0313541 Helianthus annuus HOM05D000034 ORTHO05D000037 1.0e-08 63.2 56 46.4
ECA233G0323 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.8e-08 62.4 56 44.6
ECA240G4515 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.8e-08 62.4 76 39.5
SHI22777 Sapria himalayana HOM05D000034 ORTHO05D000037 1.8e-08 62.4 47 55.3
arahy.Tifrunner.gnm1.ann1.UKR2WH Arachis hypogaea HOM05D000034 ORTHO05D000037 3.1e-08 61.6 56 46.4
ECA234G2067 Erigeron canadensis HOM05D000034 ORTHO05D000037 3.1e-08 61.6 56 44.6
ECA246G4856 Erigeron canadensis HOM05D001083 ORTHO05D001637 4.0e-08 61.2 56 42.9
MD12G1140100 Malus domestica HOM05D002354 ORTHO05D002469 4.0e-08 61.2 56 48.2
Aqoxy5G02543 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 5.2e-08 60.8 56 44.6
arahy.Tifrunner.gnm1.ann1.VI2TS7 Arachis hypogaea HOM05D000034 ORTHO05D000037 5.2e-08 60.8 56 46.4
HanXRQChr03g0088121 Helianthus annuus HOM05D000034 ORTHO05D000037 5.2e-08 60.8 56 44.6
HanXRQChr07g0199291 Helianthus annuus HOM05D000034 ORTHO05D000037 5.2e-08 60.8 56 44.6
TWI14G0994 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 5.2e-08 60.8 68 38.2
SHI11769 Sapria himalayana HOM05D000034 ORTHO05D000037 8.9e-08 60.1 36 72.2
arahy.Tifrunner.gnm1.ann1.AG0B9Q Arachis hypogaea HOM05D000034 ORTHO05D000285 1.2e-07 59.7 56 44.6
PSO832G2050 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-07 59.7 56 46.4
SHI30049 Sapria himalayana HOM05D000034 ORTHO05D000037 1.2e-07 59.7 52 48.1
PSO700G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 1.5e-07 59.3 56 44.6
Solyc10g049530.3 Solanum lycopersicum HOM05D000034 ORTHO05D000037 1.5e-07 59.3 56 42.9
AUR62039525 Chenopodium quinoa HOM05D000034 ORTHO05D000037 2.0e-07 58.9 65 41.5
PSO017G6287 Papaver somniferum HOM05D000034 ORTHO05D000037 2.0e-07 58.9 56 44.6
PSO675G0791 Papaver somniferum HOM05D000034 ORTHO05D000037 2.0e-07 58.9 56 44.6
SHI23572 Sapria himalayana HOM05D008681 ORTHO05D000037 2.0e-07 58.9 40 62.5
SHI27895 Sapria himalayana HOM05D000034 ORTHO05D000037 2.0e-07 58.9 44 61.4
Solyc12g150115.1 Solanum lycopersicum HOM05D000034 ORTHO05D000037 2.0e-07 58.9 56 42.9
CANSAT21G2255 Cannabis sativa HOM05D000034 ORTHO05D000037 2.6e-07 58.5 47 55.3
PSO063G6922 Papaver somniferum HOM05D000034 ORTHO05D000037 2.6e-07 58.5 56 44.6
PSO675G4335 Papaver somniferum HOM05D000034 ORTHO05D000037 2.6e-07 58.5 79 36.7
TWI38G1947 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.4e-07 58.2 56 44.6
TWI60G0194 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 3.4e-07 58.2 56 44.6
FvH4_4g20922 Fragaria vesca HOM05D000034 ORTHO05D000037 4.4e-07 57.8 56 44.6
FvH4_5g23912 Fragaria vesca HOM05D000034 ORTHO05D000037 4.4e-07 57.8 56 44.6
FvH4_7g19211 Fragaria vesca HOM05D000034 ORTHO05D000037 4.4e-07 57.8 56 44.6
PSO170G2012 Papaver somniferum HOM05D000034 ORTHO05D000037 5.8e-07 57.4 56 42.9
SHI04621 Sapria himalayana HOM05D008681 ORTHO05D000037 5.8e-07 57.4 35 68.6
CSS0040745 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.5e-07 57.0 56 41.1
Hma1.2p1_0868F.1_g230465 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 7.5e-07 57.0 56 44.6
TWI38G1809 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.5e-07 57.0 56 44.6
TAR078G0003 Trochodendron aralioides HOM05D000034 ORTHO05D000037 7.5e-07 57.0 56 48.2
Aqoxy2G01242 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 9.8e-07 56.6 56 41.1
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 9.8e-07 56.6 47 46.8
Sopen06g005920 Solanum pennellii HOM05D000034 ORTHO05D000037 9.8e-07 56.6 56 42.9
arahy.Tifrunner.gnm1.ann1.L9L2A8 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.3e-06 56.2 52 46.2
SHI19309 Sapria himalayana HOM05D000034 ORTHO05D000037 1.3e-06 56.2 36 66.7
Aqoxy1G02789 Aquilegia oxysepala HOM05D000034 ORTHO05D000037 1.7e-06 55.8 56 41.1
arahy.Tifrunner.gnm1.ann1.8YPI5A Arachis hypogaea HOM05D000034 ORTHO05D000037 1.7e-06 55.8 60 45.0
SHI29187 Sapria himalayana HOM05D000034 ORTHO05D000037 1.7e-06 55.8 40 62.5
TWI39G0489 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 1.7e-06 55.8 56 44.6
PSO210G4967 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 55.5 56 42.9
PSO339G0656 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-06 55.5 56 48.2
arahy.Tifrunner.gnm1.ann1.U35H08 Arachis hypogaea HOM05D000034 ORTHO05D000037 2.9e-06 55.1 56 41.1
BcaC01g00381 Brassica carinata HOM05D000034 ORTHO05D000037 2.9e-06 55.1 56 41.1
CSS0002858 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 55.1 56 39.3
CSS0005131 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 55.1 56 39.3
CSS0034168 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 2.9e-06 55.1 56 39.3
MELO3C035040.2 Cucumis melo HOM05D000034 ORTHO05D000037 3.7e-06 54.7 52 44.2
SHI32230 Sapria himalayana HOM05D000034 ORTHO05D000037 3.7e-06 54.7 55 50.9
CSS0011045 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.9e-06 54.3 56 39.3
CANSAT25G0317 Cannabis sativa HOM05D000034 ORTHO05D000037 4.9e-06 54.3 56 41.1
arahy.Tifrunner.gnm1.ann1.Y4Z60F Arachis hypogaea HOM05D000034 ORTHO05D000037 6.4e-06 53.9 60 43.3
C05p15550 Brassica napus HOM05D000034 ORTHO05D000037 6.4e-06 53.9 56 39.3
CANSAT25G1749 Cannabis sativa HOM05D000034 ORTHO05D000037 6.4e-06 53.9 56 41.1
SHI00882 Sapria himalayana HOM05D000034 ORTHO05D000037 6.4e-06 53.9 70 42.9
SHI08359 Sapria himalayana HOM05D008681 ORTHO05D000037 6.4e-06 53.9 39 66.7
SHI17360 Sapria himalayana HOM05D000034 ORTHO05D000037 6.4e-06 53.9 52 42.3
C02p19270 Brassica napus HOM05D000034 ORTHO05D000037 8.3e-06 53.5 56 41.1
C07p15910 Brassica napus HOM05D000034 ORTHO05D000037 8.3e-06 53.5 56 39.3
BolC1t02225H Brassica oleracea HOM05D000034 ORTHO05D000037 8.3e-06 53.5 56 39.3
BolC2t08059H Brassica oleracea HOM05D000034 ORTHO05D000037 8.3e-06 53.5 56 41.1
CSS0015258 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.3e-06 53.5 56 39.3
RcHm_v2.0_Chr4g0435871 Rosa chinensis HOM05D000034 ORTHO05D000037 8.3e-06 53.5 49 44.9


User provided reference genes

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