Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI22474 Sapria himalayana HOM05D004374 ORTHO05D005430 1.9e-262 908.7 468 100.0
SHI03833 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-29 134.8 93 72.0
SHI06012 Sapria himalayana HOM05D001959 ORTHO05D001955 2.5e-28 131.0 87 75.9
SHI29807 Sapria himalayana HOM05D012376 ORTHO05D000014 3.2e-28 130.6 92 70.7
SHI04515 Sapria himalayana HOM05D012376 ORTHO05D002750 1.2e-27 128.6 81 75.3
SHI08665 Sapria himalayana HOM05D000004 ORTHO05D009727 1.1e-25 122.1 81 74.1
SHI22361 Sapria himalayana HOM05D005583 ORTHO05D006507 2.5e-25 120.9 94 66.0
SHI11774 Sapria himalayana HOM05D012376 ORTHO05D006507 1.1e-23 115.5 74 75.7
SHI28122 Sapria himalayana HOM05D012376 ORTHO05D006507 1.4e-23 115.2 77 75.3
SHI20242 Sapria himalayana HOM05D000002 ORTHO05D000001 6.9e-23 112.8 94 59.6
SHI27159 Sapria himalayana HOM05D000002 ORTHO05D000001 1.5e-22 111.7 78 70.5
SHI26413 Sapria himalayana HOM05D000002 ORTHO05D000001 7.7e-22 109.4 72 72.2
SHI00122 Sapria himalayana HOM05D007925 ORTHO05D009727 1.7e-21 108.2 95 62.1
SHI05595 Sapria himalayana HOM05D001544 ORTHO05D002732 1.7e-21 108.2 98 59.2
SHI24815 Sapria himalayana HOM05D005129 ORTHO05D005585 5.0e-21 106.7 82 63.4
SHI12358 Sapria himalayana HOM05D005493 ORTHO05D007154 8.5e-21 105.9 82 69.5
SHI17237 Sapria himalayana HOM05D000139 ORTHO05D000103 1.1e-20 105.5 69 73.9
SHI15282 Sapria himalayana HOM05D012376 ORTHO05D006881 1.9e-20 104.8 73 72.6
SHI16674 Sapria himalayana HOM05D004640 ORTHO05D005489 5.5e-20 103.2 84 64.3
SHI23379 Sapria himalayana HOM05D000105 ORTHO05D000023 7.2e-20 102.8 64 76.6
SHI14628 Sapria himalayana HOM05D000105 ORTHO05D000023 1.2e-19 102.1 57 80.7
SHI16653 Sapria himalayana HOM05D012376 ORTHO05D009727 1.6e-19 101.7 98 58.2
SHI03814 Sapria himalayana HOM05D000002 ORTHO05D000001 3.6e-19 100.5 58 74.1
SHI32816 Sapria himalayana HOM05D000105 ORTHO05D000023 1.0e-18 99.0 60 80.0
SHI05153 Sapria himalayana HOM05D006273 ORTHO05D007607 2.3e-18 97.8 68 72.1
SHI15014 Sapria himalayana HOM05D002608 ORTHO05D003838 2.3e-18 97.8 94 58.5
SHI04115 Sapria himalayana HOM05D000512 ORTHO05D000861 3.0e-18 97.4 60 76.7
SHI26606 Sapria himalayana HOM05D002759 ORTHO05D003290 3.0e-18 97.4 58 79.3
SHI08441 Sapria himalayana HOM05D012376 ORTHO05D003290 2.5e-17 94.4 59 72.9
SHI11823 Sapria himalayana HOM05D000023 ORTHO05D000014 2.5e-17 94.4 63 74.6
SHI33201 Sapria himalayana HOM05D000175 ORTHO05D004574 9.7e-17 92.4 55 76.4
SHI19079 Sapria himalayana HOM05D004162 ORTHO05D004543 2.2e-16 91.3 67 70.1
SHI06747 Sapria himalayana HOM05D012376 ORTHO05D006507 6.3e-16 89.7 67 68.7
SHI18811 Sapria himalayana HOM05D001398 ORTHO05D006507 6.3e-16 89.7 63 68.3
SHI31778 Sapria himalayana HOM05D007056 ORTHO05D008278 2.4e-15 87.8 81 61.7
SHI03645 Sapria himalayana HOM05D012376 ORTHO05D006507 4.1e-15 87.0 66 62.1
SHI06474 Sapria himalayana HOM05D001167 ORTHO05D001054 4.1e-15 87.0 76 60.5
SHI06325 Sapria himalayana HOM05D001470 ORTHO05D006430 6.5e-13 79.7 71 62.0
SHI01022 Sapria himalayana HOM05D006138 ORTHO05D007778 8.5e-13 79.3 49 83.7
SHI13676 Sapria himalayana HOM05D005239 ORTHO05D006698 1.4e-12 78.6 104 48.1
SHI18084 Sapria himalayana HOM05D002902 ORTHO05D008934 2.5e-12 77.8 76 57.9
SHI37023 Sapria himalayana HOM05D000846 ORTHO05D006755 4.2e-12 77.0 104 46.2
SHI26680 Sapria himalayana HOM05D000002 ORTHO05D000001 5.5e-12 76.6 47 76.6
Lj4g0025213 Lotus japonicus HOM05D004374 ORTHO05D005430 2.7e-11 74.3 39 84.6
Lj3g0009396 Lotus japonicus HOM05D004374 ORTHO05D005430 4.7e-11 73.6 60 60.0
SHI08279 Sapria himalayana HOM05D004333 ORTHO05D005363 6.1e-11 73.2 41 78.0
Lj3g0021552 Lotus japonicus HOM05D004374 ORTHO05D005430 1.4e-10 72.0 39 82.1
SHI31853 Sapria himalayana HOM05D004888 ORTHO05D005792 1.4e-10 72.0 60 60.0
Ca_06940_v3 Cicer arietinum L. HOM05D004374 ORTHO05D005430 2.3e-10 71.2 39 79.5
Migut.K00426 Erythranthe guttata HOM05D004374 ORTHO05D005430 2.3e-10 71.2 39 82.1
Medtr4g115320 Medicago truncatula HOM05D004374 ORTHO05D005430 2.3e-10 71.2 39 79.5
SHI34245 Sapria himalayana HOM05D000105 ORTHO05D000023 2.3e-10 71.2 112 42.9
SHI15302 Sapria himalayana HOM05D002567 ORTHO05D006538 3.0e-10 70.9 86 47.7
arahy.Tifrunner.gnm1.ann1.RD7K84 Arachis hypogaea HOM05D004374 ORTHO05D005430 3.9e-10 70.5 39 79.5
Manes.06G047300 Manihot esculenta HOM05D004374 ORTHO05D005430 3.9e-10 70.5 38 84.2
SHI22008 Sapria himalayana HOM05D005591 ORTHO05D007131 3.9e-10 70.5 65 55.4
arahy.Tifrunner.gnm1.ann1.QKGT17 Arachis hypogaea HOM05D004374 ORTHO05D005430 5.1e-10 70.1 39 79.5
TPR.G24785 Trifolium pratense HOM05D004374 ORTHO05D005430 5.1e-10 70.1 39 76.9
SHI02882 Sapria himalayana HOM05D000942 ORTHO05D000918 1.5e-09 68.6 154 34.4
TAR383G0672 Trochodendron aralioides HOM05D004374 ORTHO05D005430 1.5e-09 68.6 39 79.5
CiPaw.05G118700 Carya illinoinensis HOM05D004374 ORTHO05D005430 2.0e-09 68.2 39 74.4
Hma1.2p1_0343F.1_g130960 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 2.0e-09 68.2 39 79.5
Oeu032455.1 Olea europaea HOM05D004374 ORTHO05D005430 2.0e-09 68.2 39 79.5
Peaxi162Scf00088g01332 Petunia axillaris HOM05D004374 ORTHO05D005430 2.0e-09 68.2 39 76.9
QL02p089838 Quercus lobata HOM05D004374 ORTHO05D005430 2.0e-09 68.2 39 76.9
SHI03272 Sapria himalayana HOM05D000105 ORTHO05D000023 2.6e-09 67.8 51 64.7
SHI17143 Sapria himalayana HOM05D004430 ORTHO05D005088 2.6e-09 67.8 45 71.1
SHI27519 Sapria himalayana HOM05D004808 ORTHO05D005279 2.6e-09 67.8 69 56.5
SHI50060 Sapria himalayana HOM05D000002 ORTHO05D000001 3.3e-09 67.4 138 41.3
Glyma.13G159900 Glycine max HOM05D004374 ORTHO05D005430 4.4e-09 67.0 39 76.9
Nn8g39541 Nelumbo nucifera HOM05D004374 ORTHO05D005430 4.4e-09 67.0 43 69.8
Rhsim01G0061800 Rhododendron simsii HOM05D004374 ORTHO05D005430 4.4e-09 67.0 39 74.4
SHI20252 Sapria himalayana HOM05D002287 ORTHO05D002588 4.4e-09 67.0 49 75.5
SGA_v2.0_scaffold154G37188 Striga asiatica HOM05D004374 ORTHO05D005430 4.4e-09 67.0 39 74.4
Hma1.2p1_1220F.1_g268070 Hydrangea macrophylla HOM05D004374 ORTHO05D005430 5.7e-09 66.6 39 76.9
Potri.006G065800 Populus trichocarpa HOM05D004374 ORTHO05D005430 5.7e-09 66.6 39 74.4
TAR626G1960 Trochodendron aralioides HOM05D004374 ORTHO05D005430 5.7e-09 66.6 39 76.9
Dinv41475 Davidia involucrata HOM05D004374 ORTHO05D005430 7.4e-09 66.2 39 79.5
Prupe.1G493600 Prunus persica HOM05D004374 ORTHO05D005430 7.4e-09 66.2 38 76.3
SHI22307 Sapria himalayana HOM05D003655 ORTHO05D004065 7.4e-09 66.2 42 71.4
PGR042G2992 Punica granatum HOM05D004374 ORTHO05D005430 9.7e-09 65.9 38 76.3
CAN.G1963.3 Capsicum annuum HOM05D004374 ORTHO05D005430 1.3e-08 65.5 38 76.3
Medtr3g113180 Medicago truncatula HOM05D004374 ORTHO05D005430 1.3e-08 65.5 56 55.4
Psat4g038960 Pisum sativum HOM05D004374 ORTHO05D005430 1.3e-08 65.5 40 75.0
SHI17434 Sapria himalayana HOM05D000002 ORTHO05D368918 1.3e-08 65.5 214 28.0
COL.COLO4_35152 Corchorus olitorius HOM05D004374 ORTHO05D005430 1.7e-08 65.1 41 70.7
Cfa008808 Carpinus fangiana HOM05D004374 ORTHO05D005430 2.2e-08 64.7 41 68.3
ClCG11G003340 Citrullus lanatus HOM05D004374 ORTHO05D005430 2.2e-08 64.7 38 73.7
Haze_11824 Corylus avellana HOM05D004374 ORTHO05D005430 2.2e-08 64.7 41 68.3
SHI16025 Sapria himalayana HOM05D000030 ORTHO05D000009 2.2e-08 64.7 56 58.9
Thecc.09G131900 Theobroma cacao HOM05D004374 ORTHO05D005430 2.2e-08 64.7 51 62.7
ATR0307G110 Amborella trichopoda HOM05D004374 ORTHO05D005430 2.8e-08 64.3 38 78.9
Eucgr.C01384 Eucalyptus grandis HOM05D004374 ORTHO05D005430 2.8e-08 64.3 39 74.4
Nitab4.5_0005465g0010 Nicotiana tabacum HOM05D004374 ORTHO05D005430 2.8e-08 64.3 40 75.0
Phvul.003G168700 Phaseolus vulgaris HOM05D004374 ORTHO05D005430 2.8e-08 64.3 39 71.8
Solyc07g007940.3 Solanum lycopersicum HOM05D004374 ORTHO05D005430 2.8e-08 64.3 55 60.0
Sopen07g003820 Solanum pennellii HOM05D004374 ORTHO05D005430 2.8e-08 64.3 55 60.0
MSTRG.26430 Avicennia marina HOM05D004374 ORTHO05D005430 3.7e-08 63.9 39 69.2
SHI02700 Sapria himalayana HOM05D003301 ORTHO05D003665 3.7e-08 63.9 50 62.0
SHI31277 Sapria himalayana HOM05D002876 ORTHO05D008278 3.7e-08 63.9 53 64.2
SGA_v2.0_scaffold138G35279 Striga asiatica HOM05D004374 ORTHO05D005430 3.7e-08 63.9 39 71.8
AUR62008844 Chenopodium quinoa HOM05D004374 ORTHO05D005430 4.8e-08 63.5 60 56.7
Potri.004G126720 Populus trichocarpa HOM05D004374 ORTHO05D005430 4.8e-08 63.5 39 69.2
SHI15386 Sapria himalayana HOM05D000105 ORTHO05D000023 4.8e-08 63.5 55 56.4
vmacro15378 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 4.8e-08 63.5 39 69.2
Nitab4.5_0002008g0060 Nicotiana tabacum HOM05D004374 ORTHO05D005430 6.3e-08 63.2 40 72.5
SHI19218 Sapria himalayana HOM05D004875 ORTHO05D005598 6.3e-08 63.2 70 51.4
SHI32817 Sapria himalayana HOM05D000105 ORTHO05D003665 6.3e-08 63.2 58 55.2
unitig_0.g2039 Utricularia gibba HOM05D004374 ORTHO05D005430 6.3e-08 63.2 45 60.0
SHI07494 Sapria himalayana HOM05D000002 ORTHO05D000001 8.2e-08 62.8 49 73.5
vmacro07719 Vaccinium macrocarpon HOM05D004374 ORTHO05D005430 8.2e-08 62.8 38 71.1
Aqoxy4G00722 Aquilegia oxysepala HOM05D004374 ORTHO05D005430 1.1e-07 62.4 38 73.7
arahy.Tifrunner.gnm1.ann1.9N6VAH Arachis hypogaea HOM05D004374 ORTHO05D005430 1.1e-07 62.4 37 75.7
AUR62011174 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.1e-07 62.4 60 53.3
AUR62025401 Chenopodium quinoa HOM05D004374 ORTHO05D005430 1.1e-07 62.4 60 55.0
Sabra06G0048000 Salix brachista HOM05D004374 ORTHO05D005430 1.1e-07 62.4 40 72.5
SalBow1G4424 Salvia bowleyana HOM05D004374 ORTHO05D005430 1.1e-07 62.4 37 75.7
CANSAT11G1308 Cannabis sativa HOM05D004374 ORTHO05D005430 1.4e-07 62.0 38 73.7
SHI02781 Sapria himalayana HOM05D000023 ORTHO05D000014 1.4e-07 62.0 69 49.3
SHI06884 Sapria himalayana HOM05D002142 ORTHO05D001189 1.4e-07 62.0 37 75.7
SHI27837 Sapria himalayana HOM05D002585 ORTHO05D002917 1.4e-07 62.0 60 58.3
GSVIVG01015588001 Vitis vinifera HOM05D004374 ORTHO05D005430 1.4e-07 62.0 38 76.3
Cpa.g.sc46.39 Carica papaya HOM05D004374 ORTHO05D005430 1.8e-07 61.6 39 71.8
Gohir.D05G015500 Gossypium hirsutum HOM05D004374 ORTHO05D005430 1.8e-07 61.6 37 75.7
Gorai.009G015600 Gossypium raimondii HOM05D004374 ORTHO05D005430 1.8e-07 61.6 37 75.7
MD05G1013300 Malus domestica HOM05D004374 ORTHO05D005430 1.8e-07 61.6 40 67.5
Nitab4.5_0009218g0020 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.8e-07 61.6 40 72.5
SHI03437 Sapria himalayana HOM05D004750 ORTHO05D005598 1.8e-07 61.6 35 82.9
SHI14862 Sapria himalayana HOM05D043526 ORTHO05D002760 1.8e-07 61.6 48 64.6
Actinidia40498 Actinidia chinensis HOM05D004374 ORTHO05D005430 2.4e-07 61.2 37 75.7
Cc06_g08080 Coffea canephora HOM05D004374 ORTHO05D005430 2.4e-07 61.2 38 73.7
CsaV3_2G003190 Cucumis sativus L. HOM05D002754 ORTHO05D003271 2.4e-07 61.2 38 68.4
DCAR_017779 Daucus carota HOM05D004374 ORTHO05D005430 2.4e-07 61.2 39 64.1
Dinv36480 Davidia involucrata HOM05D004374 ORTHO05D005430 2.4e-07 61.2 39 74.4
SHI00073 Sapria himalayana HOM05D001092 ORTHO05D000923 2.4e-07 61.2 62 51.6
SHI03466 Sapria himalayana HOM05D004604 ORTHO05D005744 2.4e-07 61.2 33 72.7
SHI07290 Sapria himalayana HOM05D000023 ORTHO05D000014 2.4e-07 61.2 50 62.0
Sc18g0000370 Simmondsia chinensis HOM05D004374 ORTHO05D005430 2.4e-07 61.2 38 73.7
VMungo1215G2312 Vigna mungo HOM05D004374 ORTHO05D005430 2.4e-07 61.2 38 71.1
Ciclev10002076m.g Citrus clementina HOM05D004374 ORTHO05D005430 3.1e-07 60.8 38 71.1
Ciclev10032301m.g Citrus clementina HOM05D004374 ORTHO05D005430 3.1e-07 60.8 38 71.1
SHI14999 Sapria himalayana HOM05D005377 ORTHO05D003034 3.1e-07 60.8 50 60.0
SHI18966 Sapria himalayana HOM05D000436 ORTHO05D000678 3.1e-07 60.8 38 78.9
SHI27768 Sapria himalayana HOM05D000023 ORTHO05D000014 3.1e-07 60.8 53 54.7
Lj7A483G16 Lonicera japonica HOM05D004374 ORTHO05D005430 5.3e-07 60.1 39 74.4
SHI12251 Sapria himalayana HOM05D006202 ORTHO05D008227 5.3e-07 60.1 55 54.5
SHI21057 Sapria himalayana HOM05D000555 ORTHO05D000646 5.3e-07 60.1 40 80.0
Lalb_Chr13g0301591 Lupinus albus HOM05D004374 ORTHO05D005430 7.0e-07 59.7 39 66.7
Gohir.A05G014400 Gossypium hirsutum HOM05D004374 ORTHO05D005430 9.1e-07 59.3 33 81.8
PSO384G0227 Papaver somniferum HOM05D004374 ORTHO05D005430 9.1e-07 59.3 40 65.0
SHI04053 Sapria himalayana HOM05D005117 ORTHO05D005956 9.1e-07 59.3 42 64.3
SHI15351 Sapria himalayana HOM05D013702 ORTHO05D003665 9.1e-07 59.3 50 56.0
SHI23047 Sapria himalayana HOM05D012376 ORTHO05D003975 9.1e-07 59.3 38 68.4
SHI27854 Sapria himalayana HOM05D013702 ORTHO05D003665 9.1e-07 59.3 100 40.0
SHI52964 Sapria himalayana HOM05D013702 ORTHO05D003665 9.1e-07 59.3 79 44.3
Lj5A680G20 Lonicera japonica HOM05D004374 ORTHO05D005430 1.2e-06 58.9 34 76.5
Lalb_Chr12g0197301 Lupinus albus HOM05D004374 ORTHO05D005430 1.2e-06 58.9 38 65.8
PSO478G4198 Papaver somniferum HOM05D004374 ORTHO05D005430 1.2e-06 58.9 39 66.7
SHI17527 Sapria himalayana HOM05D000004 ORTHO05D009727 1.2e-06 58.9 72 48.6
SHI21104 Sapria himalayana HOM05D001130 ORTHO05D001052 1.2e-06 58.9 82 47.6
SHI27055 Sapria himalayana HOM05D004750 ORTHO05D006207 1.2e-06 58.9 34 82.4
Nitab4.5_0000245g0220 Nicotiana tabacum HOM05D004374 ORTHO05D005430 1.6e-06 58.5 40 70.0
ECA240G2062 Erigeron canadensis HOM05D004374 ORTHO05D005430 2.0e-06 58.2 36 69.4
RcHm_v2.0_Chr2g0138971 Rosa chinensis HOM05D004374 ORTHO05D005430 2.0e-06 58.2 31 80.6
TWI34G1386 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 2.0e-06 58.2 39 61.5
MELO3C004466.2 Cucumis melo HOM05D004374 ORTHO05D005430 2.6e-06 57.8 38 65.8
SHI02583 Sapria himalayana HOM05D008681 ORTHO05D006881 2.6e-06 57.8 59 52.5
SHI02702 Sapria himalayana HOM05D003301 ORTHO05D003665 2.6e-06 57.8 50 58.0
SHI17519 Sapria himalayana HOM05D004343 ORTHO05D005695 2.6e-06 57.8 50 58.0
SHI30098 Sapria himalayana HOM05D004564 ORTHO05D006106 2.6e-06 57.8 75 44.0
MBI04_g39649_MAGBIO Magnolia biondii HOM05D004374 ORTHO05D005430 3.5e-06 57.4 49 59.2
SHI17929 Sapria himalayana HOM05D012376 ORTHO05D003290 3.5e-06 57.4 66 50.0
SHI18114 Sapria himalayana HOM05D003060 ORTHO05D001716 3.5e-06 57.4 44 63.6
TWI34G0112 Tripterygium wilfordii HOM05D004374 ORTHO05D005430 3.5e-06 57.4 39 61.5
FAN05G4736 Fragaria x ananassa HOM05D004374 ORTHO05D005430 4.5e-06 57.0 71 47.9
SHI12043 Sapria himalayana HOM05D000002 ORTHO05D007327 4.5e-06 57.0 44 59.1
SHI31150 Sapria himalayana HOM05D002628 ORTHO05D002785 4.5e-06 57.0 35 74.3
SHI02703 Sapria himalayana HOM05D003301 ORTHO05D003665 5.9e-06 56.6 42 64.3
Lsat_1_v5_gn_7_43761 Lactuca sativa HOM05D004374 ORTHO05D005430 7.7e-06 56.2 36 63.9
Os10g0493800 Oryza sativa ssp. japonica HOM05D004374 ORTHO05D005430 7.7e-06 56.2 38 63.2
Sed0026824 Sechium edule HOM05D004374 ORTHO05D005430 7.7e-06 56.2 39 69.2


User provided reference genes

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