Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 2.1e-124 449.1 239 100.0
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 2.0e-103 379.4 220 94.1
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 1.2e-87 327.0 316 63.6
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 1.6e-79 300.1 280 65.4
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 3.8e-78 295.4 282 64.2
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-66 256.9 225 69.3
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.8e-51 206.8 188 66.5
SHI37073 Sapria himalayana HOM05D007130 ORTHO05D002078 1.5e-50 203.8 270 51.5
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 3.2e-48 196.1 259 48.6
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 4.3e-45 185.7 240 48.3
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 6.9e-43 178.3 247 47.0
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 3.4e-42 176.0 241 46.5
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 1.4e-40 170.6 239 45.6
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 7.1e-40 168.3 242 45.5
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 5.6e-37 158.7 238 43.3
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 5.6e-37 158.7 236 43.6
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 5.6e-37 158.7 236 43.2
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 5.6e-37 158.7 236 43.2
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.6e-36 157.1 236 42.8
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.4e-35 154.1 236 40.3
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 1.8e-35 153.7 236 40.3
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 1.8e-35 153.7 236 40.3
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 3.1e-35 152.9 236 41.5
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 5.3e-35 152.1 240 42.5
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 5.3e-35 152.1 187 55.1
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 2.6e-34 149.8 238 40.8
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 4.9e-33 145.6 244 39.8
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 8.4e-33 144.8 243 39.1
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 2.4e-32 143.3 244 38.9
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 3.2e-32 142.9 242 38.0
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 3.2e-32 142.9 243 38.7
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 3.2e-32 142.9 243 38.7
SHI32253 Sapria himalayana HOM05D007130 ORTHO05D002078 7.1e-32 141.7 149 58.4
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 1.2e-31 141.0 242 38.8
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 4.6e-31 139.0 242 37.6
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 1.3e-30 137.5 243 38.3
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 8.7e-30 134.8 239 36.8
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 4.3e-29 132.5 240 36.2
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 4.3e-29 132.5 244 38.5
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 5.6e-29 132.1 243 37.9
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 7.4e-29 131.7 243 36.6
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 7.4e-29 131.7 240 37.9
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.6e-28 130.6 243 37.0
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.1e-28 130.2 240 35.8
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 2.1e-28 130.2 242 36.8
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 2.1e-28 130.2 237 39.2
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 2.8e-28 129.8 237 35.9
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 1.4e-27 127.5 240 36.2
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 5.3e-27 125.6 243 35.4
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 5.3e-27 125.6 243 35.4
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 5.3e-27 125.6 243 35.4
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 6.9e-27 125.2 243 35.0
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 9.0e-27 124.8 242 33.9
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 2.0e-26 123.6 243 35.0
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 2.0e-26 123.6 243 35.0
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 4.5e-26 122.5 239 34.7
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 4.5e-26 122.5 239 34.7
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 7.6e-26 121.7 241 34.9
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 7.6e-26 121.7 241 34.9
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 7.6e-26 121.7 241 34.9
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 1.7e-25 120.6 256 33.6
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 1.7e-25 120.6 236 36.9
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 2.9e-25 119.8 240 33.8
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 1.1e-24 117.9 241 33.6
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 1.1e-24 117.9 239 33.9
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 1.1e-24 117.9 239 33.9
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 3.2e-24 116.3 239 34.3
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 4.2e-24 115.9 241 33.2
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 4.2e-24 115.9 241 33.2
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 4.2e-24 115.9 241 33.2
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 4.2e-24 115.9 242 35.5
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 5.5e-24 115.5 242 33.1
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 2.3e-22 110.2 255 31.8
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 8.7e-22 108.2 247 32.0
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 3.3e-21 106.3 140 42.1
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 3.3e-21 106.3 239 31.8
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 3.3e-21 106.3 239 31.8
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 4.8e-20 102.4 255 31.0
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 8.2e-20 101.7 239 31.0
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 4.0e-19 99.4 238 31.1
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 5.3e-19 99.0 237 31.2
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 6.9e-19 98.6 237 31.6
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 2.6e-18 96.7 237 31.2
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 3.4e-18 96.3 237 30.8
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 1.0e-17 94.7 238 31.9
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 2.2e-17 93.6 236 30.1
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 1.1e-16 91.3 246 30.9
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 1.4e-16 90.9 150 38.0
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 1.4e-16 90.9 150 38.0
SHI47506 Sapria himalayana HOM05D007130 ORTHO05D002078 1.9e-16 90.5 108 61.1
Ciclev10005290m.g Citrus clementina HOM05D007130 ORTHO05D002078 2.5e-16 90.1 177 37.3
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 4.2e-16 89.4 195 37.4
SHI31594 Sapria himalayana HOM05D007130 ORTHO05D002078 3.0e-14 83.2 55 80.0
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 1.3e-09 67.8 145 37.2
DCAR_027220 Daucus carota HOM05D007130 ORTHO05D002078 5.5e-08 62.4 235 28.5
SHI32252 Sapria himalayana HOM05D007130 ORTHO05D002078 6.1e-07 58.9 31 87.1


User provided reference genes

Program Settings