Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI21123 Sapria himalayana HOM05D000280 ORTHO05D369586 1.4e-75 286.2 146 100.0
Manes.03G003000 Manihot esculenta HOM05D000280 ORTHO05D006100 9.1e-14 80.9 95 44.2
CiPaw.08G018800 Carya illinoinensis HOM05D000280 ORTHO05D006100 6.5e-12 74.7 97 41.2
Hma1.2p1_0751F.1_g212700 Hydrangea macrophylla HOM05D000280 ORTHO05D006100 8.5e-12 74.3 97 40.2
CiPaw.07G213900 Carya illinoinensis HOM05D000280 ORTHO05D006100 1.9e-11 73.2 97 42.3
FAN15G1693 Fragaria x ananassa HOM05D000280 ORTHO05D008407 1.9e-11 73.2 99 47.5
Dinv17597 Davidia involucrata HOM05D000280 ORTHO05D006100 3.2e-11 72.4 92 42.4
FvH4_2g36930 Fragaria vesca HOM05D000280 ORTHO05D006100 4.2e-11 72.0 97 41.2
vmacro05110 Vaccinium macrocarpon HOM05D000280 ORTHO05D006100 5.5e-11 71.6 96 40.6
TWI32G0853 Tripterygium wilfordii HOM05D000280 ORTHO05D006100 7.2e-11 71.2 98 42.9
FAN20G0398 Fragaria x ananassa HOM05D000280 ORTHO05D008407 1.2e-10 70.5 133 40.6
Prupe.1G461200 Prunus persica HOM05D000280 ORTHO05D006100 1.6e-10 70.1 95 44.2
Rhsim07G0169700 Rhododendron simsii HOM05D000280 ORTHO05D006100 2.1e-10 69.7 84 44.0
FAN27G1572 Fragaria x ananassa HOM05D000280 ORTHO05D008407 3.6e-10 68.9 99 45.5
MD15G1109000 Malus domestica HOM05D000280 ORTHO05D006100 3.6e-10 68.9 93 49.5
Sed0016088 Sechium edule HOM05D000280 ORTHO05D006100 3.6e-10 68.9 92 43.5
TWI34G1405 Tripterygium wilfordii HOM05D000280 ORTHO05D006100 3.6e-10 68.9 89 42.7
VMungo0251G0391 Vigna mungo HOM05D000280 ORTHO05D006100 4.7e-10 68.6 102 36.3
CAN.G1425.23 Capsicum annuum HOM05D000280 ORTHO05D006100 8.0e-10 67.8 79 38.0
Psat7g066640 Pisum sativum HOM05D000280 ORTHO05D006100 8.0e-10 67.8 93 39.8
Glyma.08G121100 Glycine max HOM05D000280 ORTHO05D006100 1.0e-09 67.4 91 46.2
PGR044G0314 Punica granatum HOM05D000280 ORTHO05D006100 1.0e-09 67.4 90 44.4
Haze_21719 Corylus avellana HOM05D000280 ORTHO05D006100 1.8e-09 66.6 151 36.4
GSVIVG01015660001 Vitis vinifera HOM05D000280 ORTHO05D006100 2.3e-09 66.2 93 46.2
Atru.chr7.2629 Acer truncatum HOM05D000280 ORTHO05D006100 3.0e-09 65.9 94 42.6
RcHm_v2.0_Chr6g0304851 Rosa chinensis HOM05D000280 ORTHO05D006100 4.0e-09 65.5 97 41.2
Lsat_1_v5_gn_8_154301 Lactuca sativa HOM05D000280 ORTHO05D006100 5.2e-09 65.1 97 42.3
PSO732G0431 Papaver somniferum HOM05D000280 ORTHO05D006100 8.8e-09 64.3 97 36.1
Phvul.002G243900 Phaseolus vulgaris HOM05D000280 ORTHO05D006100 8.8e-09 64.3 79 51.9
CSS0007869 Camellia sinensis var. sinensis HOM05D000280 ORTHO05D006100 1.5e-08 63.5 90 38.9
MELO3C003637.2 Cucumis melo HOM05D000280 ORTHO05D006100 2.0e-08 63.2 113 39.8
Eucgr.C04004 Eucalyptus grandis HOM05D000280 ORTHO05D006100 2.6e-08 62.8 87 47.1
SalBow8G3273 Salvia bowleyana HOM05D000280 ORTHO05D006100 4.4e-08 62.0 96 36.5
MSTRG.4317 Avicennia marina HOM05D000280 ORTHO05D006100 5.7e-08 61.6 92 43.5
Cc04_g07010 Coffea canephora HOM05D000280 ORTHO05D006100 5.7e-08 61.6 83 41.0
Migut.D02069 Erythranthe guttata HOM05D000280 ORTHO05D006100 5.7e-08 61.6 89 46.1
Gohir.D06G108600 Gossypium hirsutum HOM05D000280 ORTHO05D006100 5.7e-08 61.6 80 42.5
Lalb_Chr12g0204821 Lupinus albus HOM05D000280 ORTHO05D006100 5.7e-08 61.6 54 44.4
Nitab4.5_0002906g0130 Nicotiana tabacum HOM05D000548 ORTHO05D001552 5.7e-08 61.6 88 40.9
QL12p024915 Quercus lobata HOM05D000280 ORTHO05D006100 5.7e-08 61.6 83 42.2
Hund19401 Selenicereus undatus HOM05D000280 ORTHO05D006100 5.7e-08 61.6 91 45.1
CsaV3_3G046990 Cucumis sativus L. HOM05D000280 ORTHO05D006100 7.5e-08 61.2 93 41.9
PSO675G6860 Papaver somniferum HOM05D000280 ORTHO05D006100 7.5e-08 61.2 99 34.3
Peaxi162Scf00683g00036 Petunia axillaris HOM05D000280 ORTHO05D006100 9.7e-08 60.8 79 34.2
Thecc.09G006100 Theobroma cacao HOM05D000280 ORTHO05D006100 9.7e-08 60.8 93 43.0
MD08G1131300 Malus domestica HOM05D000280 ORTHO05D006100 1.3e-07 60.5 45 55.6
SHI04792 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-07 60.5 34 76.5
ClCG05G017490 Citrullus lanatus HOM05D000280 ORTHO05D006100 1.7e-07 60.1 60 45.0
Glyma.05G163800 Glycine max HOM05D000280 ORTHO05D006100 2.2e-07 59.7 92 42.4
Lj4g0007463 Lotus japonicus HOM05D000280 ORTHO05D006100 2.8e-07 59.3 91 34.1
THA.LOC104803321 Tarenaya hassleriana HOM05D000280 ORTHO05D006100 2.8e-07 59.3 73 37.0
DCAR_002123 Daucus carota HOM05D000280 ORTHO05D006100 3.7e-07 58.9 93 43.0
SGA_v2.0_scaffold74G24572 Striga asiatica HOM05D000280 ORTHO05D006100 3.7e-07 58.9 110 40.9
Ciclev10007529m.g Citrus clementina HOM05D000280 ORTHO05D006100 4.8e-07 58.5 97 45.4
Lj4A878G36 Lonicera japonica HOM05D000280 ORTHO05D006100 4.8e-07 58.5 46 52.2
arahy.Tifrunner.gnm1.ann1.SPY8PK Arachis hypogaea HOM05D000280 ORTHO05D006100 6.3e-07 58.2 87 44.8
arahy.Tifrunner.gnm1.ann1.Z3E7QY Arachis hypogaea HOM05D000280 ORTHO05D006100 6.3e-07 58.2 87 44.8
Cfa013259 Carpinus fangiana HOM05D003405 ORTHO05D006100 6.3e-07 58.2 50 48.0
Medtr8g087950 Medicago truncatula HOM05D000280 ORTHO05D006100 6.3e-07 58.2 93 37.6
Sopen03g038170 Solanum pennellii HOM05D000280 ORTHO05D006100 6.3e-07 58.2 81 40.7
ECA233G5364 Erigeron canadensis HOM05D000280 ORTHO05D006100 8.2e-07 57.8 97 45.4
Aqoxy6G02767 Aquilegia oxysepala HOM05D000280 ORTHO05D006100 1.1e-06 57.4 95 41.1
Oeu017963.1 Olea europaea HOM05D000280 ORTHO05D006100 1.4e-06 57.0 92 34.8
TPR.G6781 Trifolium pratense HOM05D000280 ORTHO05D006100 1.4e-06 57.0 51 41.2
Aqoxy7G02538 Aquilegia oxysepala HOM05D000280 ORTHO05D006100 1.8e-06 56.6 99 34.3
Nn7g38182 Nelumbo nucifera HOM05D000280 ORTHO05D006100 1.8e-06 56.6 85 37.6
TAR622G1315 Trochodendron aralioides HOM05D000280 ORTHO05D006100 1.8e-06 56.6 93 38.7
Aa31LG3G16360 Aethionema arabicum HOM05D000280 ORTHO05D006100 2.4e-06 56.2 45 51.1
Ah.11g043740 Amaranthus hybridus HOM05D000280 ORTHO05D006100 2.4e-06 56.2 86 43.0
CANSAT11G2600 Cannabis sativa HOM05D000280 ORTHO05D006100 3.1e-06 55.8 80 48.8
Gohir.A06G106400 Gossypium hirsutum HOM05D000280 ORTHO05D006100 3.1e-06 55.8 79 39.2
Sed0003669 Sechium edule HOM05D000280 ORTHO05D006100 3.1e-06 55.8 87 47.1
THA.LOC104814967 Tarenaya hassleriana HOM05D000280 ORTHO05D006100 4.1e-06 55.5 86 38.4
Sabra06G0213300 Salix brachista HOM05D000280 ORTHO05D008407 5.3e-06 55.1 100 36.0
unitig_21.g20433 Utricularia gibba HOM05D000280 ORTHO05D006100 5.3e-06 55.1 94 36.2
COL.COLO4_19045 Corchorus olitorius HOM05D000280 ORTHO05D006100 7.0e-06 54.7 37 56.8
BraA02t05040Z Brassica rapa HOM05D000280 ORTHO05D006100 9.1e-06 54.3 58 41.4


User provided reference genes

Program Settings