Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14967 Sapria himalayana HOM05D000774 ORTHO05D000602 1.7e-50 202.6 119 100.0
Sc14g0008570 Simmondsia chinensis HOM05D000774 ORTHO05D000602 4.7e-08 61.6 52 61.5
TWI18G0240 Tripterygium wilfordii HOM05D000774 ORTHO05D000602 6.1e-08 61.2 52 57.7
QL03p061530 Quercus lobata HOM05D000774 ORTHO05D000602 1.0e-07 60.5 52 59.6
MBI11_g35130_MAGBIO Magnolia biondii HOM05D000774 ORTHO05D000602 1.4e-07 60.1 52 61.5
PGR119G0397 Punica granatum HOM05D000774 ORTHO05D000602 2.3e-07 59.3 52 59.6
MSTRG.7891 Avicennia marina HOM05D000774 ORTHO05D000602 3.9e-07 58.5 52 55.8
FvH4_4g34590 Fragaria vesca HOM05D000774 ORTHO05D000602 3.9e-07 58.5 52 57.7
FAN12G1511 Fragaria x ananassa HOM05D000774 ORTHO05D000602 3.9e-07 58.5 52 57.7
FAN17G2558 Fragaria x ananassa HOM05D000774 ORTHO05D000602 3.9e-07 58.5 52 57.7
FAN22G0668 Fragaria x ananassa HOM05D000774 ORTHO05D000602 3.9e-07 58.5 52 57.7
Sabra12G0041100 Salix brachista HOM05D000774 ORTHO05D000602 5.1e-07 58.2 52 57.7
ATR0582G055 Amborella trichopoda HOM05D000774 ORTHO05D000602 6.7e-07 57.8 52 55.8
Aqoxy3G00490 Aquilegia oxysepala HOM05D000774 ORTHO05D000602 6.7e-07 57.8 52 57.7
AL2G29640 Arabidopsis lyrata HOM05D000774 ORTHO05D000602 6.7e-07 57.8 52 59.6
CSS0049733 Camellia sinensis var. sinensis HOM05D000774 ORTHO05D000602 6.7e-07 57.8 52 59.6
SEGI_19141 Sequoiadendron giganteum HOM05D000774 ORTHO05D000602 6.7e-07 57.8 52 55.8
CSS0009990 Camellia sinensis var. sinensis HOM05D000774 ORTHO05D000602 8.8e-07 57.4 52 61.5
Eucgr.K03131 Eucalyptus grandis HOM05D000774 ORTHO05D000602 8.8e-07 57.4 52 59.6
HPP92_013551 Vanilla planifolia HOM05D000774 ORTHO05D000602 8.8e-07 57.4 52 55.8
Atru.chr11.2008 Acer truncatum HOM05D000774 ORTHO05D000602 1.1e-06 57.0 52 59.6
Carub.0002s1702 Capsella rubella HOM05D000774 ORTHO05D000602 1.1e-06 57.0 52 61.5
FAN07G0533 Fragaria x ananassa HOM05D000774 ORTHO05D000602 1.1e-06 57.0 52 55.8
CSS0014994 Camellia sinensis var. sinensis HOM05D000774 ORTHO05D000602 1.5e-06 56.6 52 61.5
MD16G1091600 Malus domestica HOM05D000774 ORTHO05D000602 1.5e-06 56.6 51 58.8
Manes.12G029700 Manihot esculenta HOM05D000774 ORTHO05D000602 1.5e-06 56.6 52 59.6
Prupe.1G254800 Prunus persica HOM05D000774 ORTHO05D000602 1.5e-06 56.6 52 57.7
Thecc.02G243900 Theobroma cacao HOM05D000774 ORTHO05D000602 1.5e-06 56.6 52 63.5
TWI36G1728 Tripterygium wilfordii HOM05D000774 ORTHO05D000602 1.5e-06 56.6 52 55.8
Ciclev10031626m.g Citrus clementina HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 57.7
MELO3C004384.2 Cucumis melo HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 51.9
Potri.012G058900 Populus trichocarpa HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 57.7
Rhsim12G0121200 Rhododendron simsii HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 55.8
SalBow2G1778 Salvia bowleyana HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 55.8
TAR374G0828 Trochodendron aralioides HOM05D000774 ORTHO05D000602 2.0e-06 56.2 52 55.8
A02p16480 Brassica napus HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 59.6
BolC2t08813H Brassica oleracea HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 59.6
BraA02t06706Z Brassica rapa HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 59.6
Cfa009136 Carpinus fangiana HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 55.8
Lalb_Chr01g0000541 Lupinus albus HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 59.6
Nn3g16175 Nelumbo nucifera HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 55.8
GSVIVG01020231001 Vitis vinifera HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 57.7
Zm00001eb413700 Zea mays HOM05D000774 ORTHO05D000602 2.6e-06 55.8 52 55.8
BcaB05g24558 Brassica carinata HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 59.6
BcaC03g15177 Brassica carinata HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 59.6
C02p27570 Brassica napus HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 59.6
CsaV3_2G004100 Cucumis sativus L. HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 53.8
Duzib251G0640 Durio zibethinus HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 59.6
Thhalv10018596m.g Eutrema salsugineum HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 59.6
Gohir.D01G083700 Gossypium hirsutum HOM05D000774 ORTHO05D000602 3.3e-06 55.5 55 56.4
Lj6A804G66 Lonicera japonica HOM05D000774 ORTHO05D000602 3.3e-06 55.5 52 55.8
Aa31LG4G10610 Aethionema arabicum HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 57.7
AT1G70330 Arabidopsis thaliana HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 57.7
MSTRG.598 Avicennia marina HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 53.8
CiPaw.05G150400 Carya illinoinensis HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 53.8
ClCG05G025260 Citrullus lanatus HOM05D000774 ORTHO05D000602 4.4e-06 55.1 51 52.9
Gohir.A10G088800 Gossypium hirsutum HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 57.7
MBI11_g21958_MAGBIO Magnolia biondii HOM05D000774 ORTHO05D000602 4.4e-06 55.1 49 63.3
MBI11_g35132_MAGBIO Magnolia biondii HOM05D000774 ORTHO05D000602 4.4e-06 55.1 49 63.3
MD13G1091100 Malus domestica HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 55.8
RcHm_v2.0_Chr4g0443961 Rosa chinensis HOM05D000774 ORTHO05D000602 4.4e-06 55.1 52 55.8
CANSAT01G0414 Cannabis sativa HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 53.8
Glyma.09G225900 Glycine max HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 61.5
Glyma.12G010700 Glycine max HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 61.5
Gohir.A12G142500 Gossypium hirsutum HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Gohir.A13G083500 Gossypium hirsutum HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Gohir.D12G084002 Gossypium hirsutum HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Gohir.D12G147400 Gossypium hirsutum HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Gorai.007G341100 Gossypium raimondii HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Gorai.008G158600 Gossypium raimondii HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 57.7
Nitab4.5_0000069g0420 Nicotiana tabacum HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 55.8
TPR.G20259 Trifolium pratense HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 59.6
TPR.G24951 Trifolium pratense HOM05D000774 ORTHO05D000602 5.7e-06 54.7 52 59.6
Ca_26862_v3 Cicer arietinum L. HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 59.6
ClCG02G010540 Citrullus lanatus HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 51.9
MELO3C023069.2 Cucumis melo HOM05D000774 ORTHO05D000602 7.4e-06 54.3 50 56.0
CsaV3_2G012220 Cucumis sativus L. HOM05D000774 ORTHO05D000602 7.4e-06 54.3 50 56.0
Gohir.D06G158900 Gossypium hirsutum HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 57.7
Gorai.013G182600 Gossypium raimondii HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 55.8
Hma1.2p1_0867F.1_g230260 Hydrangea macrophylla HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 53.8
Nitab4.5_0004039g0030 Nicotiana tabacum HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 55.8
Sp5g25450 Schrenkiella parvula HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 57.7
Solyc01g008020.4 Solanum lycopersicum HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 55.8
Sopen01g003580 Solanum pennellii HOM05D000774 ORTHO05D000602 7.4e-06 54.3 52 55.8
Ah.02g129880 Amaranthus hybridus HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 55.8
Migut.L01406 Erythranthe guttata HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 53.8
Lj3g0026274 Lotus japonicus HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 59.6
Peaxi162Scf00952g00027 Petunia axillaris HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 57.7
Psat6g217680 Pisum sativum HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 59.6
Hund25342 Selenicereus undatus HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 55.8
PGSC0003DMG400016369 Solanum tuberosum HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 55.8
unitig_749.g13269 Utricularia gibba HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 53.8
vmacro16258 Vaccinium macrocarpon HOM05D000774 ORTHO05D000602 9.7e-06 53.9 52 51.9


User provided reference genes

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