Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI14964 Sapria himalayana HOM05D000804 ORTHO05D005389 1.7e-218 762.3 365 100.0
Prupe.2G098200 Prunus persica HOM05D000804 ORTHO05D005389 4.7e-67 259.2 274 49.3
Dinv43539 Davidia involucrata HOM05D000804 ORTHO05D005389 3.7e-64 249.6 254 52.4
ClCG06G008140 Citrullus lanatus HOM05D000804 ORTHO05D005389 8.2e-64 248.4 255 48.6
Potri.019G043800 Populus trichocarpa HOM05D000804 ORTHO05D005389 1.4e-63 247.7 245 52.7
RcHm_v2.0_Chr1g0337111 Rosa chinensis HOM05D000804 ORTHO05D005389 4.1e-63 246.1 248 51.6
Atru.chr2.1715 Acer truncatum HOM05D000804 ORTHO05D005389 5.3e-63 245.7 244 49.2
Manes.09G131500 Manihot esculenta HOM05D000804 ORTHO05D005389 5.3e-63 245.7 244 50.8
Thecc.05G230500 Theobroma cacao HOM05D000804 ORTHO05D005389 9.1e-63 245.0 255 48.6
QL04p052206 Quercus lobata HOM05D000804 ORTHO05D005389 4.5e-62 242.7 254 51.6
Sabra19G0054400 Salix brachista HOM05D000804 ORTHO05D005389 5.9e-62 242.3 245 52.2
GSVIVG01011337001 Vitis vinifera HOM05D000804 ORTHO05D005389 1.0e-61 241.5 244 50.4
MELO3C020372.2 Cucumis melo HOM05D000804 ORTHO05D005389 5.0e-61 239.2 255 47.8
Duzib128G1116 Durio zibethinus HOM05D000804 ORTHO05D005389 5.0e-61 239.2 255 47.8
RcHm_v2.0_Chr1g0337141 Rosa chinensis HOM05D000804 ORTHO05D005389 8.5e-61 238.4 248 50.4
Sed0024810 Sechium edule HOM05D000804 ORTHO05D005389 8.5e-61 238.4 278 44.2
CsaV3_2G011020 Cucumis sativus L. HOM05D000804 ORTHO05D005389 1.1e-60 238.0 255 47.5
MD07G1077300 Malus domestica HOM05D000804 ORTHO05D005389 1.1e-60 238.0 250 51.2
TWI32G1345 Tripterygium wilfordii HOM05D000804 ORTHO05D005389 1.5e-60 237.7 255 47.5
TAR375G0260 Trochodendron aralioides HOM05D000804 ORTHO05D005389 9.4e-60 235.0 244 52.0
FAN06G2879 Fragaria x ananassa HOM05D000804 ORTHO05D005389 3.6e-59 233.0 274 48.2
Lj7C558T5 Lonicera japonica HOM05D000804 ORTHO05D005389 4.7e-59 232.6 253 48.6
Cpa.g.sc73.84 Carica papaya HOM05D000804 ORTHO05D005389 1.4e-58 231.1 255 46.7
FAN10G1244 Fragaria x ananassa HOM05D000804 ORTHO05D005389 3.0e-58 229.9 274 47.8
Cfa003676 Carpinus fangiana HOM05D000804 ORTHO05D005389 6.8e-58 228.8 254 46.9
Haze_15812 Corylus avellana HOM05D000804 ORTHO05D005389 1.5e-57 227.6 248 48.0
Gohir.A13G075600 Gossypium hirsutum HOM05D000804 ORTHO05D005389 5.7e-57 225.7 242 47.1
Gohir.D13G099900 Gossypium hirsutum HOM05D000804 ORTHO05D005389 7.5e-57 225.3 242 46.7
Gorai.013G111900 Gossypium raimondii HOM05D000804 ORTHO05D005389 1.7e-56 224.2 242 46.7
Hma1.2p1_0684F.1_g202990 Hydrangea macrophylla HOM05D000804 ORTHO05D005389 8.3e-56 221.9 240 49.6
Nn1g09657 Nelumbo nucifera HOM05D000804 ORTHO05D005389 9.1e-55 218.4 278 45.3
CSS0037336 Camellia sinensis var. sinensis HOM05D000804 ORTHO05D005389 1.6e-54 217.6 247 46.6
Aa31LG9G17950 Aethionema arabicum HOM05D000804 ORTHO05D005389 2.7e-54 216.9 292 43.8
CAN.G700.21 Capsicum annuum HOM05D000804 ORTHO05D005389 4.5e-54 216.1 254 46.5
DCAR_029554 Daucus carota HOM05D000804 ORTHO05D005389 4.5e-54 216.1 276 45.3
Oeu024959.1 Olea europaea HOM05D000804 ORTHO05D005389 5.9e-54 215.7 277 44.4
Aqoxy3G02136 Aquilegia oxysepala HOM05D000804 ORTHO05D005389 1.7e-53 214.2 280 42.9
Nitab4.5_0003594g0020 Nicotiana tabacum HOM05D000804 ORTHO05D005389 1.7e-53 214.2 258 45.3
FvH4_7g07130 Fragaria vesca HOM05D000804 ORTHO05D005389 6.5e-53 212.2 258 47.3
AUR62017553 Chenopodium quinoa HOM05D000804 ORTHO05D005389 1.1e-52 211.5 213 51.6
CARHR216700 Cardamine hirsuta HOM05D000804 ORTHO05D005389 1.9e-52 210.7 242 46.7
AUR62028598 Chenopodium quinoa HOM05D000804 ORTHO05D005389 2.5e-52 210.3 213 49.8
Lj3g0026096 Lotus japonicus HOM05D000804 ORTHO05D005389 5.5e-52 209.1 255 43.9
Medtr8g035620 Medicago truncatula HOM05D000804 ORTHO05D005389 5.5e-52 209.1 255 43.1
Nitab4.5_0000592g0230 Nicotiana tabacum HOM05D000804 ORTHO05D005389 5.5e-52 209.1 258 44.6
arahy.Tifrunner.gnm1.ann1.A8SNFY Arachis hypogaea HOM05D000804 ORTHO05D005389 7.2e-52 208.8 275 41.8
Psat4g196240 Pisum sativum HOM05D000804 ORTHO05D005389 9.4e-52 208.4 244 44.7
Eucgr.D01046 Eucalyptus grandis HOM05D000804 ORTHO05D005389 1.6e-51 207.6 274 43.4
arahy.Tifrunner.gnm1.ann1.00QVML Arachis hypogaea HOM05D000804 ORTHO05D005389 2.1e-51 207.2 275 41.5
Rhsim01G0134900 Rhododendron simsii HOM05D000804 ORTHO05D005389 2.7e-51 206.8 244 46.7
Lalb_Chr07g0189561 Lupinus albus HOM05D000804 ORTHO05D005389 4.7e-51 206.1 244 45.5
PGR083G1621 Punica granatum HOM05D000804 ORTHO05D005389 8.0e-51 205.3 276 46.0
VMungo0331G0574 Vigna mungo HOM05D000804 ORTHO05D005389 1.0e-50 204.9 248 45.2
vmacro21110 Vaccinium macrocarpon HOM05D000804 ORTHO05D005389 1.8e-50 204.1 275 44.4
EL10Ac5g10540 Beta vulgaris HOM05D000804 ORTHO05D005389 2.3e-50 203.8 215 47.0
Hma1.2p1_0915F.1_g236270 Hydrangea macrophylla HOM05D000804 ORTHO05D005389 2.3e-50 203.8 240 47.5
Solyc01g081050.4 Solanum lycopersicum HOM05D000804 ORTHO05D005389 2.3e-50 203.8 213 48.8
ECA248G3066 Erigeron canadensis HOM05D000804 ORTHO05D005389 3.0e-50 203.4 246 47.2
Peaxi162Scf00592g00212 Petunia axillaris HOM05D000804 ORTHO05D005389 4.0e-50 203.0 243 45.3
AL7G44840 Arabidopsis lyrata HOM05D000804 ORTHO05D005389 6.8e-50 202.2 244 43.4
Phvul.010G085900 Phaseolus vulgaris HOM05D000804 ORTHO05D005389 6.8e-50 202.2 248 45.2
BolC8t48020H Brassica oleracea HOM05D000804 ORTHO05D005389 1.5e-49 201.1 243 44.0
THA.LOC104825451 Tarenaya hassleriana HOM05D000804 ORTHO05D005389 1.5e-49 201.1 259 44.0
Sp7g06220 Schrenkiella parvula HOM05D000804 ORTHO05D005389 2.0e-49 200.7 242 45.0
Cc02_g26260 Coffea canephora HOM05D000804 ORTHO05D005389 7.5e-49 198.7 290 40.3
Carub.0007s3171 Capsella rubella HOM05D000804 ORTHO05D005389 1.7e-48 197.6 269 42.0
AT5G35930 Arabidopsis thaliana HOM05D000804 ORTHO05D005389 2.2e-48 197.2 242 45.0
BcaC07g37648 Brassica carinata HOM05D000804 ORTHO05D005389 3.7e-48 196.4 243 43.2
Glyma.03G021000 Glycine max HOM05D000804 ORTHO05D005389 3.7e-48 196.4 256 43.8
PSO063G5197 Papaver somniferum HOM05D000804 ORTHO05D005389 3.7e-48 196.4 290 40.0
Thhalv10003545m.g Eutrema salsugineum HOM05D000804 ORTHO05D005389 8.3e-48 195.3 242 41.3
Migut.O00426 Erythranthe guttata HOM05D000804 ORTHO05D005389 1.1e-47 194.9 217 45.6
TPR.G30883 Trifolium pratense HOM05D000804 ORTHO05D005389 1.8e-47 194.1 244 42.6
Ciclev10030562m.g Citrus clementina HOM05D000804 ORTHO05D005389 2.4e-47 193.7 243 44.0
Ah.02g110870 Amaranthus hybridus HOM05D000804 ORTHO05D005389 3.1e-47 193.4 213 46.9
MSTRG.4983 Avicennia marina HOM05D000804 ORTHO05D005389 3.1e-47 193.4 295 40.3
A08p09490 Brassica napus HOM05D000804 ORTHO05D005389 4.1e-47 193.0 243 43.2
BraA08t32948Z Brassica rapa HOM05D000804 ORTHO05D005389 4.1e-47 193.0 243 43.2
CiPaw.01G087400 Carya illinoinensis HOM05D000804 ORTHO05D005389 5.4e-47 192.6 269 43.9
Sc17g0001320 Simmondsia chinensis HOM05D000804 ORTHO05D005389 7.0e-47 192.2 255 43.5
SGA_v2.0_scaffold4G02207 Striga asiatica HOM05D000804 ORTHO05D005389 7.0e-47 192.2 246 44.3
HanXRQChr01g0020521 Helianthus annuus HOM05D000804 ORTHO05D005389 2.7e-46 190.3 278 40.3
SalBow4G2892 Salvia bowleyana HOM05D000804 ORTHO05D005389 2.9e-45 186.8 216 44.9
FAN01G2963 Fragaria x ananassa HOM05D000804 ORTHO05D005389 6.6e-45 185.7 238 45.4
Migut.N01690 Erythranthe guttata HOM05D000804 ORTHO05D005389 2.1e-43 180.6 265 39.2
Lsat_1_v5_gn_1_84561 Lactuca sativa HOM05D000804 ORTHO05D005389 3.6e-43 179.9 255 41.2
unitig_22.g5901 Utricularia gibba HOM05D000804 ORTHO05D005389 1.0e-42 178.3 260 39.6
HPP92_005377 Vanilla planifolia HOM05D000804 ORTHO05D005389 5.2e-42 176.0 279 37.3
Zm00001eb378990 Zea mays HOM05D000804 ORTHO05D005389 3.4e-41 173.3 286 39.2
Actinidia21598 Actinidia chinensis HOM05D000804 ORTHO05D005389 2.9e-40 170.2 165 53.9
SEGI_26274 Sequoiadendron giganteum HOM05D000804 ORTHO05D005389 6.4e-40 169.1 272 37.5
Os06g0111600 Oryza sativa ssp. japonica HOM05D000804 ORTHO05D005389 1.4e-39 167.9 308 36.4
ATR0829G026 Amborella trichopoda HOM05D000804 ORTHO05D005389 2.3e-37 160.6 264 38.3
CDE12G0352 Ceratophyllum demersum HOM05D000804 ORTHO05D005389 7.3e-36 155.6 254 37.4
Ca_23822_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.1e-31 139.8 189 40.2
Ca_23827_v3 Cicer arietinum L. HOM05D000804 ORTHO05D005389 4.1e-31 139.8 189 40.2
BcaC07g37646 Brassica carinata HOM05D000804 ORTHO05D005389 5.4e-31 139.4 129 53.5
HPP92_005381 Vanilla planifolia HOM05D000804 ORTHO05D005389 3.5e-30 136.7 164 47.0
SMO145G0113 Selaginella moellendorffii HOM05D000804 ORTHO05D005389 1.1e-26 125.2 252 31.7
AagrBONN_evm.TU.Sc2ySwM_117.1272 Anthoceros agrestis HOM05D000804 ORTHO05D005389 2.6e-25 120.6 278 31.7
HPP92_005439 Vanilla planifolia HOM05D000804 ORTHO05D005389 3.5e-14 83.6 85 44.7
Mapoly0066s0079 Marchantia polymorpha HOM05D000804 ORTHO05D005389 1.9e-12 77.8 208 28.8
Pp3c10_8470 Physcomitrium patens HOM05D000804 ORTHO05D005389 3.3e-12 77.0 288 25.7
BcaB04g18018 Brassica carinata HOM05D000804 ORTHO05D005389 2.0e-09 67.8 115 35.7
SGA_v2.0_scaffold9G04774 Striga asiatica HOM05D000169 ORTHO05D000542 1.1e-07 62.0 185 28.6
Haze_26417 Corylus avellana HOM05D000169 ORTHO05D000265 1.6e-06 58.2 137 30.7
Lalb_Chr07g0180391 Lupinus albus HOM05D000169 ORTHO05D001214 2.7e-06 57.4 185 27.0
Cfa023778 Carpinus fangiana HOM05D000169 ORTHO05D000265 3.5e-06 57.0 217 25.8
Haze_26668 Corylus avellana HOM05D003817 ORTHO05D004790 6.0e-06 56.2 116 28.4
Dinv10987 Davidia involucrata HOM05D000169 ORTHO05D000542 6.0e-06 56.2 186 27.4
BraA05t22158Z Brassica rapa HOM05D000169 ORTHO05D004780 7.8e-06 55.8 203 25.1


User provided reference genes

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