Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI08960 Sapria himalayana HOM05D004363 ORTHO05D005110 1.3e-176 622.9 304 100.0
FAN09G2042 Fragaria x ananassa HOM05D004363 ORTHO05D005110 6.1e-36 155.6 217 40.6
Glyma.03G202700 Glycine max HOM05D004363 ORTHO05D005110 3.3e-34 149.8 209 42.1
Duzib093G0100 Durio zibethinus HOM05D004363 ORTHO05D005110 5.7e-34 149.1 179 45.3
Gohir.A11G315700 Gossypium hirsutum HOM05D004363 ORTHO05D005110 7.4e-34 148.7 212 42.0
Sabra16G0069700 Salix brachista HOM05D004363 ORTHO05D005110 7.4e-34 148.7 179 43.6
Manes.08G034300 Manihot esculenta HOM05D004363 ORTHO05D005110 9.7e-34 148.3 179 44.1
Lalb_Chr01g0017831 Lupinus albus HOM05D004363 ORTHO05D005110 1.3e-33 147.9 209 41.1
FvH4_6g20450 Fragaria vesca HOM05D004363 ORTHO05D005110 1.6e-33 147.5 209 39.2
FAN14G2782 Fragaria x ananassa HOM05D004363 ORTHO05D005110 1.6e-33 147.5 209 39.2
Gohir.D04G092000 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.2e-33 147.1 180 47.8
Gohir.D11G332900 Gossypium hirsutum HOM05D004363 ORTHO05D005110 2.2e-33 147.1 212 41.5
Gorai.007G363900 Gossypium raimondii HOM05D004363 ORTHO05D005110 2.2e-33 147.1 212 41.5
Gorai.009G393900 Gossypium raimondii HOM05D004363 ORTHO05D005110 2.2e-33 147.1 180 47.8
FAN02G1528 Fragaria x ananassa HOM05D004363 ORTHO05D005110 2.8e-33 146.7 209 38.8
COL.COLO4_29546 Corchorus olitorius HOM05D004363 ORTHO05D005110 3.7e-33 146.4 180 45.0
FAN05G1872 Fragaria x ananassa HOM05D004363 ORTHO05D005110 3.7e-33 146.4 209 38.8
Ciclev10010925m.g Citrus clementina HOM05D004363 ORTHO05D005110 4.8e-33 146.0 178 42.7
FAN05G3395 Fragaria x ananassa HOM05D004363 ORTHO05D005110 4.8e-33 146.0 209 38.8
Potri.016G068800 Populus trichocarpa HOM05D004363 ORTHO05D005110 6.3e-33 145.6 179 43.0
Lj1g0000064 Lotus japonicus HOM05D004363 ORTHO05D005110 8.2e-33 145.2 209 41.1
Duzib128G0297 Durio zibethinus HOM05D004363 ORTHO05D005110 1.1e-32 144.8 216 39.8
Glyma.19G200400 Glycine max HOM05D004363 ORTHO05D005110 1.1e-32 144.8 179 45.3
MD12G1041600 Malus domestica HOM05D004363 ORTHO05D005110 1.4e-32 144.4 209 40.7
Thecc.05G106200 Theobroma cacao HOM05D004363 ORTHO05D005110 1.4e-32 144.4 179 45.8
TWI77G0878 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.4e-32 144.4 192 42.2
GSVIVG01022591001 Vitis vinifera HOM05D004363 ORTHO05D005110 1.4e-32 144.4 180 43.9
Prupe.7G093600 Prunus persica HOM05D004363 ORTHO05D005110 1.8e-32 144.1 209 39.7
RcHm_v2.0_Chr3g0476301 Rosa chinensis HOM05D004363 ORTHO05D005110 2.4e-32 143.7 217 40.6
Ca_09062_v3 Cicer arietinum L. HOM05D004363 ORTHO05D005110 4.1e-32 142.9 209 41.6
Psat0s3922g0040 Pisum sativum HOM05D004363 ORTHO05D005110 4.1e-32 142.9 209 40.7
Lj1A1055T62 Lonicera japonica HOM05D004363 ORTHO05D005110 5.3e-32 142.5 184 42.9
Phvul.001G196200 Phaseolus vulgaris HOM05D004363 ORTHO05D005110 5.3e-32 142.5 205 42.0
arahy.Tifrunner.gnm1.ann1.D60SL5 Arachis hypogaea HOM05D004363 ORTHO05D005110 9.0e-32 141.7 209 39.2
arahy.Tifrunner.gnm1.ann1.KT4HPP Arachis hypogaea HOM05D004363 ORTHO05D005110 9.0e-32 141.7 209 39.2
VMungo1383G2497 Vigna mungo HOM05D004363 ORTHO05D005110 9.0e-32 141.7 205 41.5
Atru.chr8.1332 Acer truncatum HOM05D004363 ORTHO05D005110 1.5e-31 141.0 179 45.3
Dinv12347 Davidia involucrata HOM05D004363 ORTHO05D005110 1.5e-31 141.0 179 44.1
Medtr7g106380 Medicago truncatula HOM05D004363 ORTHO05D005110 1.5e-31 141.0 210 41.9
TPR.G31289 Trifolium pratense HOM05D004363 ORTHO05D005110 2.0e-31 140.6 179 44.1
Lalb_Chr25g0287961 Lupinus albus HOM05D004363 ORTHO05D005110 2.6e-31 140.2 209 38.8
Cfa020046 Carpinus fangiana HOM05D004363 ORTHO05D005110 3.4e-31 139.8 178 43.3
Haze_20157 Corylus avellana HOM05D004363 ORTHO05D005110 3.4e-31 139.8 179 43.0
QL07p036386 Quercus lobata HOM05D004363 ORTHO05D005110 5.9e-31 139.0 179 45.3
Eucgr.A02575 Eucalyptus grandis HOM05D004363 ORTHO05D005110 1.0e-30 138.3 179 45.3
Sopen01g002950 Solanum pennellii HOM05D004363 ORTHO05D005110 1.0e-30 138.3 179 42.5
CSS0038425 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.3e-30 137.9 193 42.5
CANSAT64G2344 Cannabis sativa HOM05D004363 ORTHO05D005110 1.3e-30 137.9 210 41.0
TWI74G0412 Tripterygium wilfordii HOM05D004363 ORTHO05D005110 1.3e-30 137.9 192 42.7
CiPaw.10G018600 Carya illinoinensis HOM05D004363 ORTHO05D005110 1.7e-30 137.5 179 44.1
Solyc01g006960.3 Solanum lycopersicum HOM05D004363 ORTHO05D005110 2.2e-30 137.1 179 41.9
CAN.G911.40 Capsicum annuum HOM05D004363 ORTHO05D005110 3.8e-30 136.3 179 43.0
PGR004G0690 Punica granatum HOM05D004363 ORTHO05D005110 3.8e-30 136.3 179 43.0
MD14G1040700 Malus domestica HOM05D004363 ORTHO05D005110 5.0e-30 136.0 209 38.8
Rhsim11G0045000 Rhododendron simsii HOM05D004363 ORTHO05D005110 6.5e-30 135.6 179 42.5
Dinv31774 Davidia involucrata HOM05D004363 ORTHO05D005110 1.1e-29 134.8 179 43.0
Peaxi162Scf00582g00064 Petunia axillaris HOM05D004363 ORTHO05D005110 2.5e-29 133.7 179 41.9
vmacro07483 Vaccinium macrocarpon HOM05D004363 ORTHO05D005110 3.2e-29 133.3 179 42.5
BcaNung06113 Brassica carinata HOM05D004363 ORTHO05D005110 4.2e-29 132.9 179 38.5
A10p22780 Brassica napus HOM05D004363 ORTHO05D005110 4.2e-29 132.9 179 38.5
BolC9t58910H Brassica oleracea HOM05D004363 ORTHO05D005110 4.2e-29 132.9 179 38.5
BraA10t44344Z Brassica rapa HOM05D004363 ORTHO05D005110 4.2e-29 132.9 179 38.5
CSS0042424 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 4.2e-29 132.9 189 41.3
Cpa.g.sc104.16 Carica papaya HOM05D004363 ORTHO05D005110 5.5e-29 132.5 176 43.2
Cc06_g06670 Coffea canephora HOM05D004363 ORTHO05D005110 5.5e-29 132.5 180 39.4
THA.LOC104820934 Tarenaya hassleriana HOM05D004363 ORTHO05D005110 5.5e-29 132.5 179 39.1
DCAR_020694 Daucus carota HOM05D004363 ORTHO05D005110 7.2e-29 132.1 217 38.7
Thhalv10012466m.g Eutrema salsugineum HOM05D004363 ORTHO05D005110 7.2e-29 132.1 179 38.0
AT5G16280 Arabidopsis thaliana HOM05D004363 ORTHO05D005110 1.2e-28 131.3 179 38.5
AL6G27170 Arabidopsis lyrata HOM05D004363 ORTHO05D005110 2.7e-28 130.2 179 38.0
MSTRG.5891 Avicennia marina HOM05D004363 ORTHO05D005110 2.7e-28 130.2 192 40.6
CARHR197030 Cardamine hirsuta HOM05D004363 ORTHO05D005110 2.7e-28 130.2 179 38.0
AUR62030686 Chenopodium quinoa HOM05D004363 ORTHO05D005110 3.6e-28 129.8 179 39.1
Sp6g27880 Schrenkiella parvula HOM05D004363 ORTHO05D005110 3.6e-28 129.8 179 38.0
ClCG10G018260 Citrullus lanatus HOM05D004363 ORTHO05D005110 4.6e-28 129.4 206 40.3
AUR62041186 Chenopodium quinoa HOM05D004363 ORTHO05D005110 6.1e-28 129.0 179 39.1
Lsat_1_v5_gn_6_33820 Lactuca sativa HOM05D004363 ORTHO05D005110 6.1e-28 129.0 194 39.2
Ah.07g203620 Amaranthus hybridus HOM05D004363 ORTHO05D005110 7.9e-28 128.6 173 41.0
Oeu035643.1 Olea europaea HOM05D004363 ORTHO05D005110 7.9e-28 128.6 192 42.2
ECA233G0072 Erigeron canadensis HOM05D004363 ORTHO05D005110 1.0e-27 128.3 179 40.8
Hund10860 Selenicereus undatus HOM05D004363 ORTHO05D005110 1.0e-27 128.3 179 39.1
A03p07650 Brassica napus HOM05D004363 ORTHO05D005110 3.9e-27 126.3 205 35.1
C03p08890 Brassica napus HOM05D004363 ORTHO05D005110 3.9e-27 126.3 205 35.1
BolC3t13384H Brassica oleracea HOM05D004363 ORTHO05D005110 3.9e-27 126.3 205 35.1
BraA03t10093Z Brassica rapa HOM05D004363 ORTHO05D005110 3.9e-27 126.3 205 35.1
MELO3C009547.2 Cucumis melo HOM05D004363 ORTHO05D005110 3.9e-27 126.3 209 40.2
CsaV3_3G038050 Cucumis sativus L. HOM05D004363 ORTHO05D005110 3.9e-27 126.3 209 40.2
Aa31LG11G13340 Aethionema arabicum HOM05D004363 ORTHO05D005110 6.7e-27 125.6 179 37.4
HanXRQChr02g0053261 Helianthus annuus HOM05D004363 ORTHO05D005110 6.7e-27 125.6 179 39.1
Sed0002127 Sechium edule HOM05D004363 ORTHO05D005110 6.7e-27 125.6 187 40.6
Carub.0006s1447 Capsella rubella HOM05D004363 ORTHO05D005110 8.8e-27 125.2 179 36.9
ATR0772G191 Amborella trichopoda HOM05D004363 ORTHO05D005110 1.1e-26 124.8 181 40.3
TAR628G0010 Trochodendron aralioides HOM05D004363 ORTHO05D005110 1.1e-26 124.8 180 39.4
EL10Ac5g11738 Beta vulgaris HOM05D004363 ORTHO05D005110 1.5e-26 124.4 173 38.7
BcaB01g04994 Brassica carinata HOM05D004363 ORTHO05D005110 2.0e-26 124.0 205 34.1
Sc01g0005470 Simmondsia chinensis HOM05D004363 ORTHO05D005110 2.0e-26 124.0 179 38.5
Aqoxy1G00638 Aquilegia oxysepala HOM05D004363 ORTHO05D005110 2.5e-26 123.6 180 39.4
MSTRG.19302 Avicennia marina HOM05D004363 ORTHO05D005110 3.3e-26 123.2 178 39.3
Nn6g34649 Nelumbo nucifera HOM05D004363 ORTHO05D005110 4.3e-26 122.9 180 40.0
SGA_v2.0_scaffold13G06653 Striga asiatica HOM05D004363 ORTHO05D005110 4.3e-26 122.9 179 39.7
PSO339G1158 Papaver somniferum HOM05D004363 ORTHO05D005110 1.3e-25 121.3 180 41.1
Os03g0786900 Oryza sativa ssp. japonica HOM05D004363 ORTHO05D005110 2.8e-25 120.2 181 35.9
TAR169G0003 Trochodendron aralioides HOM05D004363 ORTHO05D005110 2.8e-25 120.2 180 38.3
Zm00001eb060010 Zea mays HOM05D004363 ORTHO05D005110 3.7e-25 119.8 181 37.0
SEGI_03324 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 4.8e-25 119.4 175 38.3
PSO384G4461 Papaver somniferum HOM05D004363 ORTHO05D005110 6.3e-25 119.0 179 39.1
CDE11G0453 Ceratophyllum demersum HOM05D004363 ORTHO05D005110 1.1e-24 118.2 181 38.1
CSS0011588 Camellia sinensis var. sinensis HOM05D004363 ORTHO05D005110 1.4e-24 117.9 198 36.4
Migut.J00693 Erythranthe guttata HOM05D004363 ORTHO05D005110 1.8e-24 117.5 180 37.8
SEGI_33831 Sequoiadendron giganteum HOM05D004363 ORTHO05D005110 5.3e-24 115.9 175 38.3
HPP92_013952 Vanilla planifolia HOM05D004363 ORTHO05D005110 6.9e-24 115.5 196 35.7
Gohir.A04G054800 Gossypium hirsutum HOM05D004363 ORTHO05D005110 4.5e-23 112.8 159 44.7
Nitab4.5_0001177g0040 Nicotiana tabacum HOM05D004363 ORTHO05D005110 6.5e-22 109.0 181 38.1
Mapoly0053s0062 Marchantia polymorpha HOM05D004363 ORTHO05D005110 1.4e-11 74.7 84 42.9
AagrBONN_evm.TU.Sc2ySwM_228.1566 Anthoceros agrestis HOM05D004363 ORTHO05D005110 1.5e-10 71.2 201 29.4
SMO196G0050 Selaginella moellendorffii HOM05D004363 ORTHO05D005110 2.6e-10 70.5 177 28.8
Pp3c6_8810 Physcomitrium patens HOM05D004363 ORTHO05D005110 4.4e-10 69.7 190 28.4
Lsat_1_v5_gn_8_3860 Lactuca sativa HOM05D004363 ORTHO05D005110 2.0e-07 60.8 77 45.5


User provided reference genes

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