Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05699 Sapria himalayana HOM05D004110 ORTHO05D004810 5.9e-118 427.6 217 100.0
Manes.04G077900 Manihot esculenta HOM05D004110 ORTHO05D004810 2.5e-28 129.8 157 42.7
Sabra09G0099400 Salix brachista HOM05D004110 ORTHO05D004810 1.3e-27 127.5 179 40.2
Prupe.8G161000 Prunus persica HOM05D004110 ORTHO05D004810 3.4e-25 119.4 166 41.0
Potri.009G130000 Populus trichocarpa HOM05D004110 ORTHO05D004810 1.0e-24 117.9 168 39.3
Ciclev10027667m.g Citrus clementina HOM05D004110 ORTHO05D004810 1.7e-24 117.1 189 38.1
MD05G1116500 Malus domestica HOM05D004110 ORTHO05D004810 8.5e-24 114.8 166 42.8
FvH4_2g01950 Fragaria vesca HOM05D004110 ORTHO05D004810 1.2e-22 110.9 166 38.6
FAN20G3101 Fragaria x ananassa HOM05D004110 ORTHO05D004810 2.1e-22 110.2 166 38.0
Gohir.A12G039200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 2.1e-22 110.2 165 37.6
FAN24G2945 Fragaria x ananassa HOM05D004110 ORTHO05D004810 4.6e-22 109.0 157 38.9
GSVIVG01024075001 Vitis vinifera HOM05D004110 ORTHO05D004810 4.6e-22 109.0 158 42.4
CiPaw.06G125000 Carya illinoinensis HOM05D004110 ORTHO05D004810 1.0e-21 107.8 157 39.5
FAN15G2714 Fragaria x ananassa HOM05D004110 ORTHO05D004810 1.3e-21 107.5 166 37.3
Cpa.g.sc37.187 Carica papaya HOM05D004110 ORTHO05D004810 3.9e-21 105.9 168 39.3
MBI05_g07505_MAGBIO Magnolia biondii HOM05D004110 ORTHO05D004810 5.1e-21 105.5 160 38.1
RcHm_v2.0_Chr6g0245151 Rosa chinensis HOM05D004110 ORTHO05D004810 6.7e-21 105.1 166 36.7
Gorai.008G034000 Gossypium raimondii HOM05D004110 ORTHO05D004810 8.7e-21 104.8 165 36.4
Rhsim05G0062900 Rhododendron simsii HOM05D004110 ORTHO05D004810 8.7e-21 104.8 159 38.4
Actinidia29167 Actinidia chinensis HOM05D004110 ORTHO05D004810 1.1e-20 104.4 158 38.6
Gohir.D12G033200 Gossypium hirsutum HOM05D004110 ORTHO05D004810 1.1e-20 104.4 165 36.4
Cfa005187 Carpinus fangiana HOM05D004110 ORTHO05D004810 1.9e-20 103.6 157 38.9
Duzib248G0147 Durio zibethinus HOM05D004110 ORTHO05D004810 1.9e-20 103.6 165 39.4
QL11p047649 Quercus lobata HOM05D004110 ORTHO05D004810 1.9e-20 103.6 168 36.3
CSS0024884 Camellia sinensis var. sinensis HOM05D004110 ORTHO05D004810 3.3e-20 102.8 158 38.0
Dinv04965 Davidia involucrata HOM05D004110 ORTHO05D004810 3.3e-20 102.8 158 36.1
Haze_02193 Corylus avellana HOM05D004110 ORTHO05D004810 5.7e-20 102.1 157 37.6
vmacro17377 Vaccinium macrocarpon HOM05D004110 ORTHO05D004810 2.2e-19 100.1 158 38.0
Medtr4g075330 Medicago truncatula HOM05D004110 ORTHO05D004810 4.8e-19 99.0 156 37.2
Lalb_Chr01g0001341 Lupinus albus HOM05D004110 ORTHO05D004810 6.3e-19 98.6 184 33.7
Lj5C184G3 Lonicera japonica HOM05D004110 ORTHO05D004810 8.2e-19 98.2 157 38.2
TWI79G0689 Tripterygium wilfordii HOM05D004110 ORTHO05D004810 1.1e-18 97.8 165 36.4
Lj3g0009405 Lotus japonicus HOM05D004110 ORTHO05D004810 1.8e-18 97.1 156 37.2
EL10Ac9g21435 Beta vulgaris HOM05D004110 ORTHO05D004810 3.1e-18 96.3 169 32.0
Oeu014463.1 Olea europaea HOM05D004110 ORTHO05D004810 9.1e-18 94.7 156 36.5
DCAR_022780 Daucus carota HOM05D004110 ORTHO05D004810 1.2e-17 94.4 150 36.0
Nn5g29099 Nelumbo nucifera HOM05D004110 ORTHO05D004810 2.0e-17 93.6 160 38.1
Psat7g138160 Pisum sativum HOM05D004110 ORTHO05D004810 3.4e-17 92.8 156 35.9
Thecc.02G066600 Theobroma cacao HOM05D004110 ORTHO05D004810 3.4e-17 92.8 165 37.6
TAR376G1212 Trochodendron aralioides HOM05D004110 ORTHO05D004810 5.9e-17 92.0 157 36.9
MSTRG.20018 Avicennia marina HOM05D004110 ORTHO05D004810 1.0e-16 91.3 157 34.4
Migut.B00121 Erythranthe guttata HOM05D004110 ORTHO05D004810 1.3e-16 90.9 154 35.7
TPR.G17192 Trifolium pratense HOM05D004110 ORTHO05D004810 1.7e-16 90.5 145 37.9
Ah.01g022610 Amaranthus hybridus HOM05D004110 ORTHO05D004810 2.2e-16 90.1 169 32.5
AUR62010090 Chenopodium quinoa HOM05D004110 ORTHO05D004810 2.9e-16 89.7 158 31.0
Ca_19005_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.9e-16 89.7 156 34.0
Ca_30033_v3 Cicer arietinum L. HOM05D004110 ORTHO05D004810 2.9e-16 89.7 156 34.0
arahy.Tifrunner.gnm1.ann1.6KB8MN Arachis hypogaea HOM05D004110 ORTHO05D004810 5.0e-16 89.0 156 35.3
Eucgr.I01378 Eucalyptus grandis HOM05D004110 ORTHO05D004810 5.0e-16 89.0 160 38.1
arahy.Tifrunner.gnm1.ann1.5454UR Arachis hypogaea HOM05D004110 ORTHO05D004810 6.5e-16 88.6 156 35.3
PGR142G1237 Punica granatum HOM05D004110 ORTHO05D004810 6.5e-16 88.6 156 33.3
CANSAT25G3021 Cannabis sativa HOM05D004110 ORTHO05D004810 1.1e-15 87.8 175 35.4
Phvul.011G026800 Phaseolus vulgaris HOM05D004110 ORTHO05D004810 1.4e-15 87.4 157 32.5
AUR62013086 Chenopodium quinoa HOM05D004110 ORTHO05D004810 1.9e-15 87.0 158 30.4
Glyma.12G024600 Glycine max HOM05D004110 ORTHO05D004810 4.2e-15 85.9 157 32.5
Cc02_g16480 Coffea canephora HOM05D004110 ORTHO05D004810 5.5e-15 85.5 157 32.5
Sc18g0006650 Simmondsia chinensis HOM05D004110 ORTHO05D004810 4.6e-14 82.4 173 31.2
SGA_v2.0_scaffold58G20427 Striga asiatica HOM05D004110 ORTHO05D004810 6.1e-14 82.0 176 33.5
Hund00042 Selenicereus undatus HOM05D004110 ORTHO05D004810 1.4e-13 80.9 171 31.6
PSO541G0713 Papaver somniferum HOM05D004110 ORTHO05D004810 3.9e-13 79.3 169 32.0
THA.LOC104824773 Tarenaya hassleriana HOM05D004110 ORTHO05D004810 5.1e-13 79.0 163 30.7
A06p48910 Brassica napus HOM05D004110 ORTHO05D004810 3.3e-12 76.3 158 30.4
BraA06t27759Z Brassica rapa HOM05D004110 ORTHO05D004810 3.3e-12 76.3 158 30.4
Lsat_1_v5_gn_4_74700 Lactuca sativa HOM05D004110 ORTHO05D004810 7.4e-12 75.1 156 30.1
C07p63600 Brassica napus HOM05D004110 ORTHO05D004810 9.7e-12 74.7 161 30.4
BolC7t46773H Brassica oleracea HOM05D004110 ORTHO05D004810 9.7e-12 74.7 161 30.4
CsaV3_2G015750 Cucumis sativus L. HOM05D004110 ORTHO05D004810 1.7e-11 73.9 156 33.3
Aa31LG6G16440 Aethionema arabicum HOM05D004110 ORTHO05D004810 3.7e-11 72.8 157 29.3
HanXRQChr10g0299011 Helianthus annuus HOM05D004110 ORTHO05D004810 3.7e-11 72.8 150 31.3
PSO675G3689 Papaver somniferum HOM05D004110 ORTHO05D004810 3.7e-11 72.8 169 30.2
BcaNung01969 Brassica carinata HOM05D004110 ORTHO05D004810 4.8e-11 72.4 153 30.1
Aqoxy2G01068 Aquilegia oxysepala HOM05D004110 ORTHO05D004810 8.2e-11 71.6 157 30.6
AT4G38760 Arabidopsis thaliana HOM05D004110 ORTHO05D004810 1.4e-10 70.9 158 29.1
Carub.0007s0061 Capsella rubella HOM05D004110 ORTHO05D004810 1.8e-10 70.5 157 29.3
MELO3C020789.2 Cucumis melo HOM05D004110 ORTHO05D004810 1.8e-10 70.5 172 31.4
Thhalv10024188m.g Eutrema salsugineum HOM05D004110 ORTHO05D004810 2.4e-10 70.1 185 28.1
AL7G10630 Arabidopsis lyrata HOM05D004110 ORTHO05D004810 3.1e-10 69.7 157 31.2
ECA234G0434 Erigeron canadensis HOM05D004110 ORTHO05D004810 3.1e-10 69.7 146 34.9
Sed0006799 Sechium edule HOM05D004110 ORTHO05D004810 6.9e-10 68.6 156 30.8
Sopen11g016530 Solanum pennellii HOM05D004110 ORTHO05D004810 5.9e-09 65.5 150 29.3
Zm00001eb026650 Zea mays HOM05D004110 ORTHO05D004810 1.7e-08 63.9 104 32.7
Solyc11g039880.2 Solanum lycopersicum HOM05D004110 ORTHO05D004810 6.5e-08 62.0 150 28.7
Pp3c5_12360 Physcomitrium patens HOM05D004110 ORTHO05D004810 8.5e-08 61.6 183 26.2
Nitab4.5_0006590g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 3.2e-07 59.7 151 29.1
ATR0810G267 Amborella trichopoda HOM05D004110 ORTHO05D004810 7.2e-07 58.5 171 28.7
Nitab4.5_0007580g0010 Nicotiana tabacum HOM05D004110 ORTHO05D004810 9.4e-07 58.2 151 27.8
Sp7g37050 Schrenkiella parvula HOM05D004110 ORTHO05D004810 1.2e-06 57.8 153 28.8
HPP92_005007 Vanilla planifolia HOM05D004110 ORTHO05D004810 1.2e-06 57.8 170 26.5


User provided reference genes

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