Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI05088 Sapria himalayana HOM05D005520 ORTHO05D006633 1.6e-88 329.3 162 100.0
A08p03510 Brassica napus HOM05D005520 ORTHO05D006633 8.0e-11 71.2 123 42.3
C03p89340 Brassica napus HOM05D005520 ORTHO05D006633 1.8e-10 70.1 123 41.5
BolC3t21249H Brassica oleracea HOM05D005520 ORTHO05D006633 1.8e-10 70.1 124 40.3
QL11p031741 Quercus lobata HOM05D005520 ORTHO05D006633 1.8e-10 70.1 120 40.8
arahy.Tifrunner.gnm1.ann1.ZQ2RMB Arachis hypogaea HOM05D005520 ORTHO05D006633 2.3e-10 69.7 124 40.3
arahy.Tifrunner.gnm1.ann1.DF92AY Arachis hypogaea HOM05D005520 ORTHO05D006633 3.0e-10 69.3 121 42.1
BraA08t32384Z Brassica rapa HOM05D005520 ORTHO05D006633 5.2e-10 68.6 123 41.5
Rhsim11G0154200 Rhododendron simsii HOM05D005520 ORTHO05D006633 8.8e-10 67.8 127 33.9
Haze_10245 Corylus avellana HOM05D005520 ORTHO05D006633 1.2e-09 67.4 120 36.7
Cfa004647 Carpinus fangiana HOM05D005520 ORTHO05D006633 1.5e-09 67.0 120 37.5
CiPaw.06G167100 Carya illinoinensis HOM05D005520 ORTHO05D006633 1.5e-09 67.0 120 38.3
Carub.0001s3909 Capsella rubella HOM05D005520 ORTHO05D006633 2.6e-09 66.2 120 37.5
RhsimUnG0125400 Rhododendron simsii HOM05D005520 ORTHO05D006633 3.4e-09 65.9 148 30.4
Potri.009G090200 Populus trichocarpa HOM05D005520 ORTHO05D006633 5.7e-09 65.1 121 36.4
Actinidia34369 Actinidia chinensis HOM05D005520 ORTHO05D006633 7.5e-09 64.7 120 35.0
FAN15G3606 Fragaria x ananassa HOM05D005520 ORTHO05D006633 7.5e-09 64.7 120 36.7
Gohir.D04G160500 Gossypium hirsutum HOM05D005520 ORTHO05D006633 7.5e-09 64.7 117 36.8
Gorai.012G148200 Gossypium raimondii HOM05D005520 ORTHO05D006633 7.5e-09 64.7 117 36.8
FvH4_2g03990 Fragaria vesca HOM05D005520 ORTHO05D006633 9.8e-09 64.3 120 35.8
FAN24G1644 Fragaria x ananassa HOM05D005520 ORTHO05D006633 9.8e-09 64.3 120 35.8
RcHm_v2.0_Chr6g0253041 Rosa chinensis HOM05D005520 ORTHO05D006633 1.7e-08 63.5 120 37.5
AUR62022505 Chenopodium quinoa HOM05D005520 ORTHO05D006633 2.2e-08 63.2 142 32.4
GSVIVG01037859001 Vitis vinifera HOM05D005520 ORTHO05D006633 2.2e-08 63.2 121 39.7
BcaB04g17288 Brassica carinata HOM05D005520 ORTHO05D006633 2.8e-08 62.8 120 38.3
Gohir.A04G118800 Gossypium hirsutum HOM05D005520 ORTHO05D006633 2.8e-08 62.8 117 35.9
Ciclev10029310m.g Citrus clementina HOM05D005520 ORTHO05D006633 4.9e-08 62.0 117 36.8
Manes.10G081300 Manihot esculenta HOM05D005520 ORTHO05D006633 4.9e-08 62.0 121 38.0
Phvul.003G276100 Phaseolus vulgaris HOM05D005520 ORTHO05D006633 4.9e-08 62.0 120 40.0
THA.LOC104825832 Tarenaya hassleriana HOM05D005520 ORTHO05D006633 4.9e-08 62.0 122 38.5
Lj3g0017538 Lotus japonicus HOM05D005520 ORTHO05D006633 6.3e-08 61.6 116 37.1
Prupe.8G141400 Prunus persica HOM05D005520 ORTHO05D006633 6.3e-08 61.6 143 34.3
AT1G49880 Arabidopsis thaliana HOM05D005520 ORTHO05D006633 8.3e-08 61.2 120 38.3
Glyma.15G237900 Glycine max HOM05D005520 ORTHO05D006633 1.1e-07 60.8 120 36.7
MD10G1103100 Malus domestica HOM05D005520 ORTHO05D006633 1.1e-07 60.8 120 34.2
Sabra09G0069800 Salix brachista HOM05D005520 ORTHO05D006633 1.1e-07 60.8 121 33.9
AL1G57420 Arabidopsis lyrata HOM05D005520 ORTHO05D006633 1.4e-07 60.5 121 36.4
Migut.F01600 Erythranthe guttata HOM05D005520 ORTHO05D006633 1.4e-07 60.5 122 36.9
Glyma.13G199600 Glycine max HOM05D005520 ORTHO05D006633 1.4e-07 60.5 142 34.5
PGR042G2710 Punica granatum HOM05D005520 ORTHO05D006633 1.4e-07 60.5 120 36.7
Sp1g36760 Schrenkiella parvula HOM05D005520 ORTHO05D006633 1.4e-07 60.5 120 35.8
Ca_24141_v3 Cicer arietinum L. HOM05D005520 ORTHO05D006633 1.8e-07 60.1 142 32.4
COL.COLO4_32538 Corchorus olitorius HOM05D005520 ORTHO05D006633 1.8e-07 60.1 117 33.3
CARHR039940 Cardamine hirsuta HOM05D005520 ORTHO05D006633 2.4e-07 59.7 112 34.8
FAN20G2059 Fragaria x ananassa HOM05D005520 ORTHO05D006633 2.4e-07 59.7 120 34.2
MD05G1097000 Malus domestica HOM05D005520 ORTHO05D006633 2.4e-07 59.7 124 33.1
Duzib052G0352 Durio zibethinus HOM05D005520 ORTHO05D006633 3.1e-07 59.3 117 36.8
Thhalv10011740m.g Eutrema salsugineum HOM05D005520 ORTHO05D006633 4.1e-07 58.9 121 36.4
Nitab4.5_0000158g0130 Nicotiana tabacum HOM05D005520 ORTHO05D006633 5.4e-07 58.5 120 35.8
Potri.001G296000 Populus trichocarpa HOM05D005520 ORTHO05D006633 5.4e-07 58.5 156 30.1
Hund12620 Selenicereus undatus HOM05D005520 ORTHO05D006633 5.4e-07 58.5 148 29.7
Thecc.02G114500 Theobroma cacao HOM05D005520 ORTHO05D006633 5.4e-07 58.5 122 34.4
Lalb_Chr24g0402091 Lupinus albus HOM05D005520 ORTHO05D006633 9.2e-07 57.8 144 33.3
Oeu009678.2 Olea europaea HOM05D005520 ORTHO05D006633 9.2e-07 57.8 124 33.9
MSTRG.16689 Avicennia marina HOM05D005520 ORTHO05D006633 1.6e-06 57.0 120 35.0
Nitab4.5_0008364g0030 Nicotiana tabacum HOM05D005520 ORTHO05D006633 1.6e-06 57.0 123 35.0
CSS0014981 Camellia sinensis var. sinensis HOM05D005520 ORTHO05D006633 2.0e-06 56.6 118 29.7
Medtr1g050465 Medicago truncatula HOM05D005520 ORTHO05D006633 2.0e-06 56.6 122 32.8
TPR.G14598 Trifolium pratense HOM05D005520 ORTHO05D006633 2.0e-06 56.6 126 33.3
VMungo0251G2197 Vigna mungo HOM05D005520 ORTHO05D006633 2.0e-06 56.6 120 36.7
EL10Ac8g19365 Beta vulgaris HOM05D005520 ORTHO05D006633 2.7e-06 56.2 120 31.7
TPR.G18583 Trifolium pratense HOM05D005520 ORTHO05D006633 2.7e-06 56.2 120 32.5
Cpa.g.sc106.74 Carica papaya HOM05D005520 ORTHO05D006633 3.5e-06 55.8 122 35.2
Medtr8g045480 Medicago truncatula HOM05D005520 ORTHO05D006633 4.5e-06 55.5 122 32.8
MELO3C017991.2 Cucumis melo HOM05D005520 ORTHO05D006633 5.9e-06 55.1 120 32.5
Migut.B00429 Erythranthe guttata HOM05D005520 ORTHO05D009373 5.9e-06 55.1 124 35.5


User provided reference genes

Program Settings