Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI02769 Sapria himalayana HOM05D001739 ORTHO05D004575 2.7e-130 468.8 253 100.0
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 2.9e-44 183.0 251 49.4
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.9e-43 180.3 232 49.6
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 2.5e-43 179.9 237 49.4
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 4.7e-42 175.6 236 48.3
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 8.0e-42 174.9 238 47.5
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 1.4e-41 174.1 249 49.0
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 1.4e-41 174.1 233 48.9
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 1.4e-41 174.1 243 49.4
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 1.8e-41 173.7 241 47.7
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 2.3e-41 173.3 245 44.9
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 6.8e-41 171.8 232 48.3
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 8.9e-41 171.4 236 44.1
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 1.2e-40 171.0 249 45.4
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 2.6e-40 169.9 229 48.5
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 2.6e-40 169.9 240 44.6
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 3.4e-40 169.5 238 45.4
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 4.4e-40 169.1 248 46.0
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 5.8e-40 168.7 242 45.5
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 1.3e-39 167.5 249 45.4
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 1.7e-39 167.2 244 47.5
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 3.7e-39 166.0 246 44.7
Dinv25554 Davidia involucrata HOM05D001739 ORTHO05D004575 4.9e-39 165.6 234 45.7
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 6.4e-39 165.2 246 47.2
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 6.4e-39 165.2 223 47.1
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 1.1e-38 164.5 241 45.2
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 1.1e-38 164.5 249 42.2
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 1.4e-38 164.1 246 48.0
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 1.8e-38 163.7 226 47.8
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 2.4e-38 163.3 229 48.0
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 3.2e-38 162.9 251 46.2
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 4.1e-38 162.5 245 43.7
Prupe.6G204300 Prunus persica HOM05D001739 ORTHO05D004575 4.1e-38 162.5 241 44.0
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 5.4e-38 162.2 243 46.5
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 7.0e-38 161.8 244 46.7
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 9.2e-38 161.4 233 45.1
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 9.2e-38 161.4 255 43.5
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 1.6e-37 160.6 250 47.6
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 2.0e-37 160.2 241 48.5
Atru.chr7.1751 Acer truncatum HOM05D001739 ORTHO05D004575 2.7e-37 159.8 248 47.2
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 4.6e-37 159.1 235 45.1
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.6e-37 159.1 248 41.9
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 4.6e-37 159.1 248 41.9
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 4.6e-37 159.1 238 45.4
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 4.6e-37 159.1 248 43.1
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 4.6e-37 159.1 249 41.0
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 4.6e-37 159.1 249 43.0
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 4.6e-37 159.1 233 44.2
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 6.0e-37 158.7 243 44.9
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 6.0e-37 158.7 245 40.4
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 7.8e-37 158.3 227 49.8
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.0e-36 157.9 247 40.1
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.0e-36 157.9 247 40.1
FAN28G1182 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.0e-36 157.9 247 40.1
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.3e-36 157.5 244 44.3
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 1.3e-36 157.5 248 43.5
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 1.3e-36 157.5 215 46.0
AT2G34357 Arabidopsis thaliana HOM05D001739 ORTHO05D004575 1.7e-36 157.1 243 44.4
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 1.7e-36 157.1 238 47.9
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 1.7e-36 157.1 235 46.4
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 2.3e-36 156.8 243 43.2
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 2.3e-36 156.8 230 44.8
Sc18g0003470 Simmondsia chinensis HOM05D001739 ORTHO05D004575 2.3e-36 156.8 236 42.8
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 3.0e-36 156.4 241 46.9
CARHR128440 Cardamine hirsuta HOM05D001739 ORTHO05D004575 8.6e-36 154.8 244 43.0
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 8.6e-36 154.8 239 44.4
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 8.6e-36 154.8 231 46.3
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 1.1e-35 154.5 238 45.0
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 1.1e-35 154.5 256 42.2
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.1e-35 154.5 245 40.0
Eucgr.C00777 Eucalyptus grandis HOM05D001739 ORTHO05D004575 1.9e-35 153.7 244 42.2
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.9e-35 153.7 249 40.2
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 3.3e-35 152.9 227 48.9
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 3.3e-35 152.9 246 43.9
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 3.3e-35 152.9 244 43.9
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 4.3e-35 152.5 236 41.9
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 5.6e-35 152.1 225 48.9
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 7.3e-35 151.8 226 45.6
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 1.6e-34 150.6 188 48.9
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 1.6e-34 150.6 214 46.7
Carub.0004s1602 Capsella rubella HOM05D001739 ORTHO05D004575 2.1e-34 150.2 242 40.5
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 2.1e-34 150.2 257 43.6
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 3.6e-34 149.4 215 47.9
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 3.6e-34 149.4 256 44.5
Thhalv10016153m.g Eutrema salsugineum HOM05D001739 ORTHO05D004575 3.6e-34 149.4 245 41.6
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 3.6e-34 149.4 234 44.9
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 8.0e-34 148.3 246 42.7
BcaB01g03896 Brassica carinata HOM05D001739 ORTHO05D004575 1.8e-33 147.1 244 41.4
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 1.8e-33 147.1 254 45.3
Aa31LG9G14080 Aethionema arabicum HOM05D001739 ORTHO05D004575 4.0e-33 146.0 241 39.4
BcaB02g09558 Brassica carinata HOM05D001739 ORTHO05D004575 4.0e-33 146.0 238 42.0
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 1.2e-32 144.4 235 40.9
C03p22320 Brassica napus HOM05D001739 ORTHO05D004575 2.0e-32 143.7 245 41.2
BcaC01g05798 Brassica carinata HOM05D001739 ORTHO05D004575 3.4e-32 142.9 245 41.2
BolC3t14614H Brassica oleracea HOM05D001739 ORTHO05D004575 3.4e-32 142.9 245 41.2
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 3.4e-32 142.9 222 47.7
A03p19100 Brassica napus HOM05D001739 ORTHO05D004575 4.4e-32 142.5 245 41.2
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.4e-32 142.5 221 42.1
BraA03t11167Z Brassica rapa HOM05D001739 ORTHO05D004575 7.5e-32 141.7 244 39.8
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 7.5e-32 141.7 222 48.2
Sp4g16630 Schrenkiella parvula HOM05D001739 ORTHO05D004575 9.8e-32 141.4 244 38.9
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 1.7e-31 140.6 222 42.3
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 2.9e-31 139.8 225 44.0
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 3.7e-31 139.4 232 41.8
A05p11320 Brassica napus HOM05D001739 ORTHO05D004575 4.9e-31 139.0 238 39.5
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 4.9e-31 139.0 225 45.8
CAN.G333.13 Capsicum annuum HOM05D001739 ORTHO05D004575 1.1e-30 137.9 239 42.7
BolC4t23047H Brassica oleracea HOM05D001739 ORTHO05D004575 1.4e-30 137.5 238 39.5
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 1.4e-30 137.5 232 37.1
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 1.4e-30 137.5 246 42.3
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 1.4e-30 137.5 233 39.1
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 2.4e-30 136.7 218 42.7
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 5.4e-30 135.6 246 41.1
C04p14660 Brassica napus HOM05D001739 ORTHO05D004575 7.0e-30 135.2 238 39.1
HanXRQChr04g0122381 Helianthus annuus HOM05D001739 ORTHO05D004575 1.6e-29 134.0 192 46.4
vmacro17096 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 3.5e-29 132.9 215 40.5
vmacro23083 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.0e-28 131.3 200 42.0
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 5.0e-28 129.0 198 44.9
AUR62028281 Chenopodium quinoa HOM05D001739 ORTHO05D004575 9.5e-27 124.8 226 40.7
CDE04G0230 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 3.6e-26 122.9 241 38.2
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 4.7e-26 122.5 191 46.1
BcaC02g11606 Brassica carinata HOM05D001739 ORTHO05D004575 8.1e-26 121.7 233 36.5
arahy.Tifrunner.gnm1.ann1.S2P6Y8 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.3e-25 120.2 217 41.5
SEGI_25708 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 4.4e-24 115.9 230 34.8
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 5.8e-24 115.5 261 37.2
C04p13350 Brassica napus HOM05D001739 ORTHO05D004575 1.3e-23 114.4 233 35.2
Oeu055335.1 Olea europaea HOM05D001739 ORTHO05D004575 4.9e-23 112.5 162 46.3
BcaC02g11500 Brassica carinata HOM05D001739 ORTHO05D004575 4.1e-22 109.4 230 35.2
Pp3c2_3190 Physcomitrium patens HOM05D001739 ORTHO05D004575 7.8e-21 105.1 237 36.7
ATR0681G387 Amborella trichopoda HOM05D001739 ORTHO05D004575 1.5e-19 100.9 236 36.4
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 1.4e-17 94.4 252 32.1
Dinv30816 Davidia involucrata HOM05D001739 ORTHO05D004575 3.1e-17 93.2 211 37.9
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 2.0e-16 90.5 248 32.7
CBR_g11184 Chara braunii HOM05D001739 ORTHO05D004575 1.1e-14 84.7 164 36.0
HanXRQChr10g0281301 Helianthus annuus HOM05D001739 ORTHO05D004575 7.8e-13 78.6 102 46.1
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.3e-12 77.8 108 42.6


User provided reference genes

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