Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01765 Sapria himalayana HOM05D007130 ORTHO05D002078 1.7e-186 656.0 353 100.0
SHI00452 Sapria himalayana HOM05D007130 ORTHO05D002078 5.6e-126 454.9 440 64.1
SHI43343 Sapria himalayana HOM05D007130 ORTHO05D002078 2.6e-99 366.3 346 65.0
SHI15242 Sapria himalayana HOM05D007130 ORTHO05D002078 3.4e-83 312.8 311 62.1
SHI22413 Sapria himalayana HOM05D007130 ORTHO05D002078 2.8e-77 293.1 282 64.2
SHI36601 Sapria himalayana HOM05D007130 ORTHO05D002078 3.7e-69 266.2 233 69.1
SHI37073 Sapria himalayana HOM05D007130 ORTHO05D002078 6.7e-63 245.4 285 55.4
Manes.03G177600 Manihot esculenta HOM05D007130 ORTHO05D002078 1.2e-48 198.0 274 48.2
Potri.008G153800 Populus trichocarpa HOM05D007130 ORTHO05D002078 1.5e-46 191.0 250 47.6
Sabra10G0056800 Salix brachista HOM05D007130 ORTHO05D002078 9.8e-46 188.3 289 44.6
Manes.15G029700 Manihot esculenta HOM05D007130 ORTHO05D002078 1.1e-44 184.9 252 47.6
SHI15429 Sapria himalayana HOM05D007130 ORTHO05D002078 1.4e-44 184.5 212 56.6
Potri.010G086700 Populus trichocarpa HOM05D007130 ORTHO05D002078 9.2e-44 181.8 308 42.5
Duzib151G0843 Durio zibethinus HOM05D007130 ORTHO05D002078 5.0e-42 176.0 236 47.0
Sabra08G0117300 Salix brachista HOM05D007130 ORTHO05D002078 1.1e-41 174.9 293 41.0
SHI31594 Sapria himalayana HOM05D007130 ORTHO05D002078 1.9e-41 174.1 193 57.0
Gohir.D02G039300 Gossypium hirsutum HOM05D007130 ORTHO05D002078 4.3e-41 172.9 275 41.5
Gorai.005G043500 Gossypium raimondii HOM05D007130 ORTHO05D002078 4.3e-41 172.9 275 41.5
COL.COLO4_21489 Corchorus olitorius HOM05D007130 ORTHO05D002078 1.6e-40 171.0 261 43.3
Gohir.A02G032600 Gossypium hirsutum HOM05D007130 ORTHO05D002078 3.6e-40 169.9 236 45.8
Gohir.A09G216400 Gossypium hirsutum HOM05D007130 ORTHO05D002078 8.0e-40 168.7 271 40.6
Gorai.006G239800 Gossypium raimondii HOM05D007130 ORTHO05D002078 1.0e-39 168.3 236 43.6
Thecc.04G233400 Theobroma cacao HOM05D007130 ORTHO05D002078 1.0e-39 168.3 287 40.4
Duzib052G0494 Durio zibethinus HOM05D007130 ORTHO05D002078 2.3e-39 167.2 358 34.6
Gohir.D09G218800 Gossypium hirsutum HOM05D007130 ORTHO05D002078 3.0e-39 166.8 287 40.1
BraA05t20581Z Brassica rapa HOM05D007130 ORTHO05D002078 3.2e-36 156.8 282 40.1
Carub.0007s2727 Capsella rubella HOM05D007130 ORTHO05D002078 4.1e-36 156.4 241 43.2
Dinv44541 Davidia involucrata HOM05D007130 ORTHO05D002078 4.1e-36 156.4 240 45.0
SHI47506 Sapria himalayana HOM05D007130 ORTHO05D002078 5.4e-36 156.0 218 50.0
BcaB02g07856 Brassica carinata HOM05D007130 ORTHO05D002078 7.0e-36 155.6 243 42.4
AL7G41010 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.2e-35 154.8 241 41.9
SHI31593 Sapria himalayana HOM05D000105 ORTHO05D000001 1.6e-35 154.5 151 60.3
BcaC08g44270 Brassica carinata HOM05D007130 ORTHO05D002078 2.0e-35 154.1 281 39.5
Sp7g12990 Schrenkiella parvula HOM05D007130 ORTHO05D002078 2.0e-35 154.1 241 41.9
A05p16760 Brassica napus HOM05D007130 ORTHO05D002078 2.7e-35 153.7 241 41.9
C06p16890 Brassica napus HOM05D007130 ORTHO05D002078 7.8e-35 152.1 281 39.1
BolC6t36885H Brassica oleracea HOM05D007130 ORTHO05D002078 7.8e-35 152.1 281 39.1
THA.LOC104808552 Tarenaya hassleriana HOM05D007130 ORTHO05D002078 5.0e-34 149.4 238 41.2
AT4G14840 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 3.3e-33 146.7 241 41.1
AL3G36830 Arabidopsis lyrata HOM05D007130 ORTHO05D002078 1.2e-32 144.8 239 39.7
CARHR098410 Cardamine hirsuta HOM05D007130 ORTHO05D002078 1.6e-32 144.4 243 40.7
Thhalv10020335m.g Eutrema salsugineum HOM05D007130 ORTHO05D002078 2.1e-32 144.1 237 40.5
Cfa015660 Carpinus fangiana HOM05D007130 ORTHO05D002078 3.6e-32 143.3 236 41.1
AT3G22520 Arabidopsis thaliana HOM05D007130 ORTHO05D002078 6.2e-32 142.5 239 39.3
SHI15023 Sapria himalayana HOM05D007130 ORTHO05D002078 8.0e-32 142.1 212 46.2
Sp3g20280 Schrenkiella parvula HOM05D007130 ORTHO05D002078 1.4e-31 141.4 240 40.0
Aa31LG8G9060 Aethionema arabicum HOM05D007130 ORTHO05D002078 3.1e-31 140.2 242 39.7
Cpa.g.sc58.97 Carica papaya HOM05D007130 ORTHO05D002078 5.2e-31 139.4 255 39.2
Haze_00888 Corylus avellana HOM05D007130 ORTHO05D002078 6.8e-31 139.0 236 39.0
Aa31LG9G2460 Aethionema arabicum HOM05D007130 ORTHO05D002078 1.2e-30 138.3 242 40.5
Carub.0003s2268 Capsella rubella HOM05D007130 ORTHO05D002078 2.0e-30 137.5 299 35.1
BcaC09g49178 Brassica carinata HOM05D007130 ORTHO05D002078 2.6e-30 137.1 237 39.2
C01p41760 Brassica napus HOM05D007130 ORTHO05D002078 2.6e-30 137.1 237 39.2
BolC1t04132H Brassica oleracea HOM05D007130 ORTHO05D002078 2.6e-30 137.1 237 39.2
BcaB04g20515 Brassica carinata HOM05D007130 ORTHO05D002078 3.4e-30 136.7 240 38.3
A01p32610 Brassica napus HOM05D007130 ORTHO05D002078 5.8e-30 136.0 237 38.8
BraA01t03389Z Brassica rapa HOM05D007130 ORTHO05D002078 5.8e-30 136.0 237 38.8
CARHR221400 Cardamine hirsuta HOM05D007130 ORTHO05D002078 1.3e-29 134.8 283 34.6
A03p42790 Brassica napus HOM05D007130 ORTHO05D002078 2.2e-29 134.0 236 38.1
BraA03t13426Z Brassica rapa HOM05D007130 ORTHO05D002078 2.2e-29 134.0 236 38.6
Nitab4.5_0001342g0090 Nicotiana tabacum HOM05D007130 ORTHO05D002078 6.4e-29 132.5 258 35.3
BcaC05g28042 Brassica carinata HOM05D007130 ORTHO05D002078 8.3e-29 132.1 238 38.7
C05p40640 Brassica napus HOM05D007130 ORTHO05D002078 8.3e-29 132.1 238 38.7
BolC5t32803H Brassica oleracea HOM05D007130 ORTHO05D002078 8.3e-29 132.1 238 38.7
BcaC01g03442 Brassica carinata HOM05D007130 ORTHO05D002078 1.1e-28 131.7 236 38.6
C03p52560 Brassica napus HOM05D007130 ORTHO05D002078 1.1e-28 131.7 236 38.6
BcaB06g26362 Brassica carinata HOM05D007130 ORTHO05D002078 2.4e-28 130.6 238 37.8
BolC3t17525H Brassica oleracea HOM05D007130 ORTHO05D002078 9.2e-28 128.6 236 38.6
Lalb_Chr09g0319881 Lupinus albus HOM05D007130 ORTHO05D002078 1.6e-27 127.9 240 36.2
Cc03_g03890 Coffea canephora HOM05D007130 ORTHO05D002078 2.0e-27 127.5 247 35.6
A05p26240 Brassica napus HOM05D007130 ORTHO05D002078 4.6e-27 126.3 239 36.8
Phvul.007G237900 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 7.8e-27 125.6 300 33.7
BcaC05g28058 Brassica carinata HOM05D007130 ORTHO05D002078 1.3e-26 124.8 294 33.7
C05p40720 Brassica napus HOM05D007130 ORTHO05D002078 1.3e-26 124.8 294 33.7
BolC5t32817H Brassica oleracea HOM05D007130 ORTHO05D002078 1.3e-26 124.8 294 33.7
Nitab4.5_0004256g0020 Nicotiana tabacum HOM05D007130 ORTHO05D002078 1.3e-26 124.8 259 35.1
BraA05t21500Z Brassica rapa HOM05D007130 ORTHO05D002078 2.3e-26 124.0 239 37.7
VMungo0720G1198 Vigna mungo HOM05D007130 ORTHO05D002078 5.0e-26 122.9 289 32.9
Solyc09g082130.4 Solanum lycopersicum HOM05D007130 ORTHO05D002078 2.5e-25 120.6 240 36.2
Sopen09g031010 Solanum pennellii HOM05D007130 ORTHO05D002078 2.5e-25 120.6 240 36.2
MSTRG.9978 Avicennia marina HOM05D007130 ORTHO05D002078 7.3e-25 119.0 236 34.7
Glyma.20G078300 Glycine max HOM05D007130 ORTHO05D002078 7.3e-25 119.0 252 33.3
Glyma.10G127200 Glycine max HOM05D007130 ORTHO05D002078 3.6e-24 116.7 237 34.2
CAN.G1094.6 Capsicum annuum HOM05D007130 ORTHO05D002078 6.8e-23 112.5 240 34.6
Phvul.010G080100 Phaseolus vulgaris HOM05D007130 ORTHO05D002078 8.9e-23 112.1 238 37.0
SGA_v2.0_scaffold39G15213 Striga asiatica HOM05D007130 ORTHO05D002078 2.6e-22 110.5 238 33.6
Aa31sc50G40 Aethionema arabicum HOM05D007130 ORTHO05D002078 7.5e-22 109.0 194 39.7
SHI32253 Sapria himalayana HOM05D007130 ORTHO05D002078 2.2e-21 107.5 202 43.1
Peaxi162Scf00092g00720 Petunia axillaris HOM05D007130 ORTHO05D002078 8.3e-21 105.5 234 33.3
GSVIVG01023108001 Vitis vinifera HOM05D007130 ORTHO05D002078 4.1e-20 103.2 179 42.5
VMungo0331G0902 Vigna mungo HOM05D007130 ORTHO05D002078 2.7e-19 100.5 242 35.5
Glyma.01G137900 Glycine max HOM05D007130 ORTHO05D002078 1.0e-18 98.6 196 34.7
Glyma.01G138200 Glycine max HOM05D007130 ORTHO05D002078 1.0e-18 98.6 196 34.7
SHI34763 Sapria himalayana HOM05D003253 ORTHO05D002078 1.1e-15 88.6 127 44.1
SHI32255 Sapria himalayana HOM05D007130 ORTHO05D002078 8.4e-13 79.0 108 48.1
Ciclev10005290m.g Citrus clementina HOM05D007130 ORTHO05D002078 1.1e-12 78.6 193 31.6
SHI15430 Sapria himalayana HOM05D007130 ORTHO05D002078 3.5e-11 73.6 49 77.6
SHI36599 Sapria himalayana HOM05D007130 ORTHO05D002078 4.3e-09 66.6 38 78.9
Glyma.01G237500 Glycine max HOM05D007130 ORTHO05D002078 9.6e-09 65.5 96 39.6
DCAR_027220 Daucus carota HOM05D007130 ORTHO05D002078 1.2e-08 65.1 237 30.0
Cpa.g.sc79.63 Carica papaya HOM05D007130 ORTHO05D002078 1.6e-08 64.7 164 33.5
VMungo0265G0002 Vigna mungo HOM05D007130 ORTHO05D002078 5.2e-07 59.7 127 34.6
QL10p019789 Quercus lobata HOM05D007130 ORTHO05D002078 3.4e-06 57.0 237 24.5
SHI32252 Sapria himalayana HOM05D007130 ORTHO05D002078 7.6e-06 55.8 31 87.1


User provided reference genes

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