Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SHI01562 Sapria himalayana HOM05D000004 ORTHO05D000563 1.4e-50 202.6 98 100.0
PGR031G3196 Punica granatum HOM05D000004 ORTHO05D000002 1.4e-18 96.3 97 52.6
PGR027G0001 Punica granatum HOM05D000004 ORTHO05D000002 5.3e-18 94.4 92 55.4
PGR042G1478 Punica granatum HOM05D000004 ORTHO05D000002 5.3e-18 94.4 92 55.4
PGR031G1605 Punica granatum HOM05D000004 ORTHO05D000002 7.0e-18 94.0 92 54.3
PGR083G2735 Punica granatum HOM05D000004 ORTHO05D000002 7.0e-18 94.0 92 54.3
PGR029G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR029G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR029G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR029G0005 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0001 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0002 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0003 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0004 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0005 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR085G0006 Punica granatum HOM05D000004 ORTHO05D000002 1.2e-17 93.2 92 54.3
PGR083G1943 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-17 92.4 92 53.3
QL07p027315 Quercus lobata HOM05D000004 ORTHO05D000002 2.9e-16 88.6 92 50.0
Atru.chr8.715 Acer truncatum HOM05D000004 ORTHO05D000563 2.1e-14 82.4 92 46.7
Cpa.g.sc22.77 Carica papaya HOM05D000004 ORTHO05D000563 3.6e-14 81.6 117 41.9
PGR119G1621 Punica granatum HOM05D000004 ORTHO05D000563 8.0e-14 80.5 103 43.7
Cpa.g.sc38.20 Carica papaya HOM05D000004 ORTHO05D000563 1.8e-13 79.3 112 41.1
Cpa.g.sc3290.1 Carica papaya HOM05D000004 ORTHO05D000563 2.3e-13 79.0 112 42.0
SHI34774 Sapria himalayana HOM05D000004 ORTHO05D000002 3.0e-13 78.6 124 33.9
Cpa.g.sc1364.1 Carica papaya HOM05D000004 ORTHO05D000563 4.0e-13 78.2 95 45.3
Cpa.g.sc44.39 Carica papaya HOM05D000004 ORTHO05D000563 5.2e-13 77.8 116 38.8
Cpa.g.sc143.15 Carica papaya HOM05D000004 ORTHO05D000563 8.8e-13 77.0 116 39.7
Cpa.g.sc1083.1 Carica papaya HOM05D000004 ORTHO05D000563 1.2e-12 76.6 116 39.7
THA.LOC109116513 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 1.2e-12 76.6 92 45.7
THA.LOC109116955 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 1.2e-12 76.6 92 45.7
Cpa.g.sc181.6 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-12 76.3 116 38.8
PGR031G2848 Punica granatum HOM05D000004 ORTHO05D000002 1.5e-12 76.3 92 43.5
Cpa.g.sc11.81 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-12 75.9 112 39.3
Cpa.g.sc1555.3 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-12 75.9 116 39.7
Cpa.g.sc31.28 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-12 75.9 112 39.3
Cpa.g.sc54.19 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-12 75.9 116 38.8
PGR102G2704 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-12 75.9 92 43.5
PGR119G1513 Punica granatum HOM05D000004 ORTHO05D000002 2.0e-12 75.9 92 43.5
PGR025G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-12 75.5 92 43.5
PGR044G0113 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-12 75.5 92 43.5
PGR044G1656 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-12 75.5 92 43.5
PGR044G2607 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-12 75.5 92 43.5
PGR052G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-12 75.5 92 43.5
PGR119G0902 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-12 75.5 92 43.5
PGR119G1563 Punica granatum HOM05D000004 ORTHO05D000563 2.6e-12 75.5 92 43.5
PGR139G0001 Punica granatum HOM05D000004 ORTHO05D000002 2.6e-12 75.5 92 43.5
Cpa.g.sc1555.2 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-12 75.1 92 44.6
Cpa.g.sc440.2 Carica papaya HOM05D000004 ORTHO05D000563 3.4e-12 75.1 115 40.0
PGR115G0001 Punica granatum HOM05D000004 ORTHO05D000002 4.4e-12 74.7 92 43.5
PGR142G1811 Punica granatum HOM05D000004 ORTHO05D000002 5.7e-12 74.3 92 42.4
Cpa.g.sc61.2 Carica papaya HOM05D000004 ORTHO05D000563 7.5e-12 73.9 116 38.8
Cpa.g.sc154.9 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-12 73.6 116 37.1
Cpa.g.sc2066.1 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-12 73.6 116 38.8
Cpa.g.sc2811.1 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-12 73.6 116 38.8
Cpa.g.sc330.2 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-12 73.6 116 39.7
Cpa.g.sc60.45 Carica papaya HOM05D000004 ORTHO05D000563 9.8e-12 73.6 92 44.6
Cpa.g.sc971.2 Carica papaya HOM05D000004 ORTHO05D000563 1.3e-11 73.2 116 38.8
PGR004G1184 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-11 73.2 92 41.3
PGR004G1708 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-11 73.2 92 42.4
PGR083G2791 Punica granatum HOM05D000004 ORTHO05D000563 1.3e-11 73.2 92 41.3
Cpa.g.sc1884.2 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-11 72.4 92 42.4
Cpa.g.sc210.11 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-11 72.0 116 38.8
Cpa.g.sc445.2 Carica papaya HOM05D000004 ORTHO05D000563 2.8e-11 72.0 117 40.2
PGR083G1623 Punica granatum HOM05D000004 ORTHO05D000002 3.7e-11 71.6 92 41.3
Cpa.g.sc28.117 Carica papaya HOM05D000004 ORTHO05D000563 4.8e-11 71.2 92 43.5
Cpa.g.sc32.166 Carica papaya HOM05D000004 ORTHO05D000563 1.1e-10 70.1 91 44.0
Cpa.g.sc38.3 Carica papaya HOM05D000004 ORTHO05D000563 1.4e-10 69.7 91 42.9
PGR031G3733 Punica granatum HOM05D000004 ORTHO05D000563 1.4e-10 69.7 103 37.9
SHI01378 Sapria himalayana HOM05D000004 ORTHO05D000563 1.8e-10 69.3 64 59.4
Atru.chr8.565 Acer truncatum HOM05D000004 ORTHO05D000563 2.4e-10 68.9 87 41.4
Cpa.g.sc28.97 Carica papaya HOM05D000004 ORTHO05D000563 3.1e-10 68.6 109 38.5
THA.LOC104799780 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.1e-10 68.6 92 39.1
THA.LOC104806048 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.1e-10 68.6 92 39.1
THA.LOC104821896 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 3.1e-10 68.6 92 39.1
THA.LOC109116027 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.1e-10 68.2 92 40.2
THA.LOC104818534 Tarenaya hassleriana HOM05D000004 ORTHO05D000563 5.4e-10 67.8 92 39.1
Cpa.g.sc154.5 Carica papaya HOM05D000004 ORTHO05D000563 9.1e-10 67.0 92 40.2
THA.LOC109116034 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 9.1e-10 67.0 92 39.1
Cpa.g.sc56.54 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-09 66.2 87 41.4
MSTRG.13863 Avicennia marina HOM05D000004 ORTHO05D000563 2.0e-09 65.9 92 38.0
MSTRG.20360 Avicennia marina HOM05D000004 ORTHO05D000002 2.0e-09 65.9 92 38.0
Cpa.g.sc118.7 Carica papaya HOM05D000004 ORTHO05D000563 2.0e-09 65.9 78 43.6
Lj5g0019047 Lotus japonicus HOM05D000004 ORTHO05D000563 2.7e-09 65.5 93 38.7
Cpa.g.sc303.9 Carica papaya HOM05D000004 ORTHO05D000563 3.5e-09 65.1 92 39.1
Cpa.g.sc645.1 Carica papaya HOM05D000004 ORTHO05D000563 4.5e-09 64.7 78 44.9
THA.LOC109117128 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 4.5e-09 64.7 78 44.9
SHI33683 Sapria himalayana HOM05D000004 ORTHO05D000563 5.9e-09 64.3 123 31.7
Cpa.g.sc30.31 Carica papaya HOM05D000004 ORTHO05D000563 1.0e-08 63.5 78 44.9
Cpa.g.sc8.259 Carica papaya HOM05D000004 ORTHO05D000563 2.2e-08 62.4 87 42.5
TPR.G39664 Trifolium pratense HOM05D000004 ORTHO05D000563 2.2e-08 62.4 92 39.1
Cpa.g.sc97.21 Carica papaya HOM05D000004 ORTHO05D000563 2.9e-08 62.0 112 33.9
SHI22035 Sapria himalayana HOM05D000004 ORTHO05D000563 3.8e-08 61.6 43 60.5
Cpa.g.sc0.175 Carica papaya HOM05D000004 ORTHO05D000563 5.0e-08 61.2 92 37.0
Cpa.g.sc225.4 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 59.7 84 36.9
Cpa.g.sc88.32 Carica papaya HOM05D000004 ORTHO05D000563 1.5e-07 59.7 92 40.2
PGR102G1518 Punica granatum HOM05D000004 ORTHO05D000563 1.5e-07 59.7 89 37.1
Cpa.g.sc303.2 Carica papaya HOM05D000004 ORTHO05D000563 3.2e-07 58.5 76 39.5
SHI44110 Sapria himalayana HOM05D000004 ORTHO05D000563 9.4e-07 57.0 92 34.8
SHI49228 Sapria himalayana HOM05D000004 ORTHO05D000563 9.4e-07 57.0 92 34.8
Cpa.g.sc11.128 Carica papaya HOM05D000004 ORTHO05D000563 1.6e-06 56.2 82 39.0
SHI54914 Sapria himalayana HOM05D000004 ORTHO05D009927 1.6e-06 56.2 92 33.7
Cpa.g.sc28.86 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 55.8 78 38.5
Cpa.g.sc949.5 Carica papaya HOM05D000004 ORTHO05D000563 2.1e-06 55.8 102 34.3
SHI51545 Sapria himalayana HOM05D000004 ORTHO05D000563 2.1e-06 55.8 92 33.7
Cpa.g.sc2219.1 Carica papaya HOM05D000004 ORTHO05D000563 4.7e-06 54.7 79 40.5
THA.LOC104807122 Tarenaya hassleriana HOM05D000004 ORTHO05D000002 6.1e-06 54.3 92 31.5
Cpa.g.sc38.15 Carica papaya HOM05D000004 ORTHO05D000563 8.0e-06 53.9 72 38.9
PGR042G0073 Punica granatum HOM05D000004 ORTHO05D000002 8.0e-06 53.9 78 38.5


User provided reference genes

Program Settings