Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold224G42946 Striga asiatica HOM05D006544 ORTHO05D008757 1.0e-128 463.4 229 100.0
Migut.L01701 Erythranthe guttata HOM05D006544 ORTHO05D008757 3.3e-95 352.1 229 79.5
MSTRG.10320 Avicennia marina HOM05D006544 ORTHO05D008757 1.4e-90 336.7 227 74.4
Oeu016983.1 Olea europaea HOM05D006544 ORTHO05D008757 4.8e-86 321.6 239 70.7
Dinv37314 Davidia involucrata HOM05D006544 ORTHO05D008757 1.1e-85 320.5 231 71.0
PGSC0003DMG400010472 Solanum tuberosum HOM05D006544 ORTHO05D008757 1.8e-85 319.7 209 76.1
SalBow5G2848 Salvia bowleyana HOM05D006544 ORTHO05D008757 3.1e-85 318.9 226 70.4
unitig_578.g16041 Utricularia gibba HOM05D006544 ORTHO05D008757 2.0e-84 316.2 184 81.0
Eucgr.A01683 Eucalyptus grandis HOM05D006544 ORTHO05D008757 3.4e-84 315.5 217 73.3
Thecc.05G065700 Theobroma cacao HOM05D006544 ORTHO05D008757 3.4e-84 315.5 231 71.0
Actinidia28904 Actinidia chinensis HOM05D006544 ORTHO05D008757 1.0e-83 313.9 185 81.1
Solyc10g084040.2 Solanum lycopersicum HOM05D006544 ORTHO05D008757 1.0e-83 313.9 201 78.1
CAN.G1169.17 Capsicum annuum HOM05D006544 ORTHO05D008757 1.3e-83 313.5 220 73.2
Aa31LG1G21780 Aethionema arabicum HOM05D006544 ORTHO05D008757 1.7e-83 313.2 191 80.1
Sopen10g033470 Solanum pennellii HOM05D006544 ORTHO05D008757 1.7e-83 313.2 222 72.5
THA.LOC104816347 Tarenaya hassleriana HOM05D006544 ORTHO05D008757 2.9e-83 312.4 182 80.8
Ciclev10012670m.g Citrus clementina HOM05D006544 ORTHO05D008757 3.8e-83 312.0 229 69.0
Duzib093G0756 Durio zibethinus HOM05D006544 ORTHO05D008757 3.8e-83 312.0 214 73.8
Carub.0008s1316 Capsella rubella HOM05D006544 ORTHO05D008757 6.5e-83 311.2 188 80.3
ECA233G4064 Erigeron canadensis HOM05D006544 ORTHO05D008757 1.1e-82 310.5 186 79.0
Nitab4.5_0000063g0030 Nicotiana tabacum HOM05D006544 ORTHO05D008757 1.1e-82 310.5 195 78.5
Potri.016G092300 Populus trichocarpa HOM05D006544 ORTHO05D008757 1.4e-82 310.1 213 72.8
TAR636G3123 Trochodendron aralioides HOM05D006544 ORTHO05D008757 1.4e-82 310.1 207 72.9
Thhalv10014610m.g Eutrema salsugineum HOM05D006544 ORTHO05D008757 1.9e-82 309.7 207 74.4
Lsat_1_v5_gn_6_25121 Lactuca sativa HOM05D006544 ORTHO05D008757 1.9e-82 309.7 198 75.8
Lalb_Chr06g0171711 Lupinus albus HOM05D006544 ORTHO05D008757 1.9e-82 309.7 180 82.8
RcHm_v2.0_Chr3g0470171 Rosa chinensis HOM05D006544 ORTHO05D008757 2.5e-82 309.3 229 69.9
CiPaw.09G172700 Carya illinoinensis HOM05D006544 ORTHO05D008757 5.5e-82 308.1 198 75.8
TWI74G1602 Tripterygium wilfordii HOM05D006544 ORTHO05D008757 5.5e-82 308.1 212 70.8
GSVIVG01025731001 Vitis vinifera HOM05D006544 ORTHO05D008757 5.5e-82 308.1 212 73.1
AL8G27480 Arabidopsis lyrata HOM05D006544 ORTHO05D008757 7.2e-82 307.8 181 81.8
HanXRQChr13g0401051 Helianthus annuus HOM05D006544 ORTHO05D008757 9.4e-82 307.4 202 73.8
Sp6g39380 Schrenkiella parvula HOM05D006544 ORTHO05D008757 9.4e-82 307.4 188 79.3
Gohir.A09G147100 Gossypium hirsutum HOM05D006544 ORTHO05D008757 1.6e-81 306.6 214 72.0
CsaV3_6G039870 Cucumis sativus L. HOM05D006544 ORTHO05D008757 2.7e-81 305.8 226 69.0
Peaxi162Scf00311g00059 Petunia axillaris HOM05D006544 ORTHO05D008757 2.7e-81 305.8 206 74.3
BcaC03g13011 Brassica carinata HOM05D006544 ORTHO05D008757 3.6e-81 305.4 187 80.2
PGR004G0128 Punica granatum HOM05D006544 ORTHO05D008757 3.6e-81 305.4 208 71.6
MD12G1113500 Malus domestica HOM05D006544 ORTHO05D008757 4.7e-81 305.1 181 79.6
Gohir.D09G142700 Gossypium hirsutum HOM05D006544 ORTHO05D008757 6.1e-81 304.7 220 70.9
Manes.09G066600 Manihot esculenta HOM05D006544 ORTHO05D008757 6.1e-81 304.7 187 77.5
QL07p043583 Quercus lobata HOM05D006544 ORTHO05D008757 6.1e-81 304.7 197 76.1
AT5G52970 Arabidopsis thaliana HOM05D006544 ORTHO05D008757 7.9e-81 304.3 208 72.6
Nn2g11585 Nelumbo nucifera HOM05D006544 ORTHO05D008757 1.0e-80 303.9 199 75.9
BcaB05g21832 Brassica carinata HOM05D006544 ORTHO05D008757 2.3e-80 302.8 187 78.1
MELO3C024463.2 Cucumis melo HOM05D006544 ORTHO05D008757 3.0e-80 302.4 224 68.3
Sc02g0001640 Simmondsia chinensis HOM05D006544 ORTHO05D008757 3.0e-80 302.4 198 74.2
Cc06_g04210 Coffea canephora HOM05D006544 ORTHO05D008757 3.9e-80 302.0 172 83.7
BolC2t06093H Brassica oleracea HOM05D006544 ORTHO05D008757 5.1e-80 301.6 188 79.8
Nitab4.5_0010279g0020 Nicotiana tabacum HOM05D006544 ORTHO05D008757 5.1e-80 301.6 249 65.5
C02p01030 Brassica napus HOM05D006544 ORTHO05D008757 8.8e-80 300.8 188 79.8
Phvul.007G219800 Phaseolus vulgaris HOM05D006544 ORTHO05D008757 2.0e-79 299.7 222 71.2
Sed0018427 Sechium edule HOM05D006544 ORTHO05D008757 2.6e-79 299.3 224 68.3
Psat6g072960 Pisum sativum HOM05D006544 ORTHO05D008757 3.3e-79 298.9 234 67.1
Gorai.006G164200 Gossypium raimondii HOM05D006544 ORTHO05D008757 4.4e-79 298.5 187 77.5
DCAR_020819 Daucus carota HOM05D006544 ORTHO05D008757 5.7e-79 298.1 186 75.8
EL10Ac7g16625 Beta vulgaris HOM05D006544 ORTHO05D008757 7.4e-79 297.7 186 78.0
ClCG04G009280 Citrullus lanatus HOM05D006544 ORTHO05D008757 7.4e-79 297.7 216 69.4
Medtr1g063350 Medicago truncatula HOM05D006544 ORTHO05D008757 7.4e-79 297.7 182 78.6
arahy.Tifrunner.gnm1.ann1.4P9CL0 Arachis hypogaea HOM05D006544 ORTHO05D008757 1.3e-78 297.0 172 82.6
arahy.Tifrunner.gnm1.ann1.8Z8BZM Arachis hypogaea HOM05D006544 ORTHO05D008757 1.3e-78 297.0 172 82.6
FvH4_6g16320 Fragaria vesca HOM05D006544 ORTHO05D008757 1.7e-78 296.6 181 76.8
MBI18_g04983_MAGBIO Magnolia biondii HOM05D006544 ORTHO05D008757 2.2e-78 296.2 192 74.5
Cfa017605 Carpinus fangiana HOM05D006544 ORTHO05D008757 2.8e-78 295.8 213 71.8
COL.COLO4_26969 Corchorus olitorius HOM05D006544 ORTHO05D008757 3.7e-78 295.4 248 64.5
vmacro07290 Vaccinium macrocarpon HOM05D006544 ORTHO05D008757 6.3e-78 294.7 191 77.0
PSO339G0933 Papaver somniferum HOM05D006544 ORTHO05D008757 1.4e-77 293.5 183 76.5
Ca_11495_v3 Cicer arietinum L. HOM05D006544 ORTHO05D008757 2.4e-77 292.7 205 73.2
Lj5g0006333 Lotus japonicus HOM05D006544 ORTHO05D008757 2.4e-77 292.7 210 70.5
CARHR265950 Cardamine hirsuta HOM05D006544 ORTHO05D008757 3.1e-77 292.4 209 69.9
TPR.G11258 Trifolium pratense HOM05D006544 ORTHO05D008757 4.1e-77 292.0 175 81.1
FAN09G3810 Fragaria x ananassa HOM05D006544 ORTHO05D008757 5.3e-77 291.6 182 76.4
CANSAT80G1747 Cannabis sativa HOM05D006544 ORTHO05D008757 7.0e-77 291.2 171 80.1
FAN05G5519 Fragaria x ananassa HOM05D006544 ORTHO05D008757 9.1e-77 290.8 233 65.2
PSO801G0526 Papaver somniferum HOM05D006544 ORTHO05D008757 1.5e-76 290.0 206 70.9
ATR1093G019 Amborella trichopoda HOM05D006544 ORTHO05D008757 2.6e-76 289.3 207 67.6
BraA02t04758Z Brassica rapa HOM05D006544 ORTHO05D008757 2.6e-76 289.3 197 73.1
Glyma.10G056700 Glycine max HOM05D006544 ORTHO05D008757 4.5e-76 288.5 222 68.5
VMungo0720G1694 Vigna mungo HOM05D006544 ORTHO05D008757 7.7e-76 287.7 205 71.7
HPP92_009890 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.9e-75 285.8 229 64.2
Aqoxy2G01774 Aquilegia oxysepala HOM05D006544 ORTHO05D008757 5.0e-75 285.0 183 76.0
AUR62042496 Chenopodium quinoa HOM05D006544 ORTHO05D008757 8.5e-75 284.3 224 66.5
Lj2A122G33 Lonicera japonica HOM05D006544 ORTHO05D008757 1.9e-74 283.1 159 83.0
Zm00001eb088350 Zea mays HOM05D006544 ORTHO05D008757 3.6e-73 278.9 167 79.6
Ah.15g092510 Amaranthus hybridus HOM05D006544 ORTHO05D008757 1.4e-72 276.9 156 83.3
FAN14G3080 Fragaria x ananassa HOM05D006544 ORTHO05D008757 1.4e-72 276.9 182 72.5
AUR62040358 Chenopodium quinoa HOM05D006544 ORTHO05D008757 3.0e-72 275.8 156 83.3
CDE09G0170 Ceratophyllum demersum HOM05D006544 ORTHO05D008757 5.2e-72 275.0 182 68.7
SEGI_38453 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 2.2e-70 269.6 184 67.4
Sabra16G0097900 Salix brachista HOM05D006544 ORTHO05D008757 8.2e-70 267.7 316 50.0
Prupe.6G232400 Prunus persica HOM05D006544 ORTHO05D008757 3.1e-69 265.8 190 69.5
Rhsim03G0092100 Rhododendron simsii HOM05D006544 ORTHO05D008757 5.0e-67 258.5 237 58.6
Pp3c13_11800 Physcomitrium patens HOM05D006544 ORTHO05D008757 2.7e-65 252.7 167 72.5
Mapoly0064s0090 Marchantia polymorpha HOM05D006544 ORTHO05D008757 2.3e-64 249.6 185 64.9
SMO118G0079 Selaginella moellendorffii HOM05D006544 ORTHO05D008757 4.8e-62 241.9 147 74.8
AagrBONN_evm.TU.Sc2ySwM_228.4577 Anthoceros agrestis HOM05D006544 ORTHO05D008757 1.3e-59 233.8 155 73.5
Cre15.g636050 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D008757 1.8e-56 223.4 210 54.3
Cpa.g.sc54.75 Carica papaya HOM05D006544 ORTHO05D008757 6.8e-56 221.5 118 86.4
CBR_g11899 Chara braunii HOM05D006544 ORTHO05D008757 2.4e-53 213.0 163 58.9
SEGI_20985 Sequoiadendron giganteum HOM05D006544 ORTHO05D008757 2.4e-53 213.0 122 77.9
MCO09G250 Micromonas commoda HOM05D006544 ORTHO05D008757 7.2e-50 201.4 180 55.0
AagrBONN_evm.TU.Sc2ySwM_344.816 Anthoceros agrestis HOM05D006544 ORTHO05D008757 9.5e-50 201.1 122 73.0
PRCOL_00002491 Prasinoderma coloniale HOM05D006544 ORTHO05D008757 4.0e-48 195.7 146 61.0
CSS0000889 Camellia sinensis var. sinensis HOM05D006544 ORTHO05D008757 1.7e-43 180.3 201 50.2
Os07g0534000 Oryza sativa ssp. japonica HOM05D006544 ORTHO05D008757 1.1e-42 177.6 118 70.3
Lj5g0024591 Lotus japonicus HOM05D006544 ORTHO05D008757 1.8e-40 170.2 94 81.9
Cpa.g.sc4277.1 Carica papaya HOM05D006544 ORTHO05D008757 2.3e-40 169.9 115 73.0
Cpa.g.sc54.73 Carica papaya HOM05D006544 ORTHO05D008757 2.3e-40 169.9 115 73.0
Medtr5g037320 Medicago truncatula HOM05D006544 ORTHO05D008757 1.2e-28 131.0 96 69.8
Hund20313 Selenicereus undatus HOM05D006544 ORTHO05D008757 1.8e-24 117.1 73 76.7
HPP92_009894 Vanilla planifolia HOM05D006544 ORTHO05D008757 1.8e-24 117.1 65 81.5
CBR_g20266 Chara braunii HOM05D006544 ORTHO05D021234 1.2e-17 94.4 130 36.2
AagrBONN_evm.TU.Sc2ySwM_368.258 Anthoceros agrestis HOM05D006544 ORTHO05D021234 3.6e-17 92.8 139 33.1
Nn2g13777 Nelumbo nucifera HOM05D006544 ORTHO05D008757 8.1e-17 91.7 65 69.2
SalBow5G0971 Salvia bowleyana HOM05D008540 ORTHO05D009454 8.9e-16 88.2 48 85.4
HPP92_009893 Vanilla planifolia HOM05D006544 ORTHO05D008757 2.4e-13 80.1 109 46.8
SEGI_36386 Sequoiadendron giganteum HOM05D006544 ORTHO05D021234 1.6e-12 77.4 133 30.1
Cpa.g.sc54.74 Carica papaya HOM05D006544 ORTHO05D008757 3.0e-11 73.2 96 49.0
Cre03.g154600 Chlamydomonas reinhardtii HOM05D006544 ORTHO05D021234 3.4e-07 59.7 160 25.6
MCO12G278 Micromonas commoda HOM05D006544 ORTHO05D021234 5.8e-07 58.9 121 28.1
MD04G1093800 Malus domestica HOM05D006544 ORTHO05D247365 1.7e-06 57.4 35 74.3


User provided reference genes

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