Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold198G41089 Striga asiatica HOM05D047370 ORTHO05D000119 2.2e-81 305.4 144 100.0
SGA_v2.0_scaffold198G41091 Striga asiatica HOM05D047370 ORTHO05D000119 3.3e-48 195.3 141 71.6
Migut.F00960 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.0e-17 92.4 121 40.5
Migut.F00962 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.1e-14 84.0 110 39.1
SGA_v2.0_scaffold253G45117 Striga asiatica HOM05D000256 ORTHO05D000119 1.4e-14 83.6 92 47.8
Migut.F00961 Erythranthe guttata HOM05D000256 ORTHO05D000119 6.9e-14 81.3 131 37.4
Migut.F00959 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.4e-13 79.0 133 34.6
Migut.F00958 Erythranthe guttata HOM05D000256 ORTHO05D000119 1.7e-12 76.6 144 37.5
Oeu020862.1 Olea europaea HOM05D000256 ORTHO05D000119 1.7e-12 76.6 137 40.1
Oeu028943.1 Olea europaea HOM05D000256 ORTHO05D000119 2.2e-12 76.3 95 42.1
Oeu055432.1 Olea europaea HOM05D000256 ORTHO05D000119 3.8e-12 75.5 102 40.2
Oeu043247.1 Olea europaea HOM05D000256 ORTHO05D000119 1.1e-11 73.9 95 41.1
Oeu033249.1 Olea europaea HOM05D000256 ORTHO05D000119 1.4e-11 73.6 98 42.9
Oeu037984.1 Olea europaea HOM05D000256 ORTHO05D000119 1.4e-11 73.6 109 39.4
SGA_v2.0_scaffold165G38221 Striga asiatica HOM05D000256 ORTHO05D000119 3.2e-11 72.4 108 37.0
SGA_v2.0_scaffold165G38222 Striga asiatica HOM05D000256 ORTHO05D000119 2.7e-10 69.3 114 36.0
SGA_v2.0_scaffold4904G54562 Striga asiatica HOM05D000256 ORTHO05D000119 1.3e-09 67.0 84 41.7
SalBow4G1941 Salvia bowleyana HOM05D000256 ORTHO05D000119 1.9e-08 63.2 134 31.3
SGA_v2.0_scaffold353G49706 Striga asiatica HOM05D000256 ORTHO05D000119 7.4e-08 61.2 129 34.1
CSS0039783 Camellia sinensis var. sinensis HOM05D000256 ORTHO05D000119 2.1e-07 59.7 76 40.8
Migut.F01941 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.1e-07 59.7 109 28.4
Migut.N01875 Erythranthe guttata HOM05D000256 ORTHO05D000119 2.8e-07 59.3 87 36.8
Oeu022154.1 Olea europaea HOM05D000256 ORTHO05D000119 2.8e-07 59.3 134 29.9
Sed0024573 Sechium edule HOM05D000256 ORTHO05D000119 8.1e-07 57.8 93 31.2
Migut.H02432 Erythranthe guttata HOM05D005430 ORTHO05D000119 1.1e-06 57.4 119 32.8
MD05G1181700 Malus domestica HOM05D000256 ORTHO05D000119 1.4e-06 57.0 131 27.5
Oeu020002.1 Olea europaea HOM05D000256 ORTHO05D000119 1.8e-06 56.6 132 30.3
ClCG08G002620 Citrullus lanatus HOM05D012637 ORTHO05D015615 2.4e-06 56.2 113 32.7
FvH4_1g24901 Fragaria vesca HOM05D000256 ORTHO05D000119 2.4e-06 56.2 124 30.6
unitig_899.g15044 Utricularia gibba HOM05D000256 ORTHO05D000119 2.4e-06 56.2 113 29.2
Migut.F01754 Erythranthe guttata HOM05D000256 ORTHO05D000119 3.1e-06 55.8 130 28.5
Gorai.009G340000 Gossypium raimondii HOM05D000256 ORTHO05D000119 3.1e-06 55.8 130 30.8
MD15G1135600 Malus domestica HOM05D015853 ORTHO05D000119 3.1e-06 55.8 138 31.2
RcHm_v2.0_Chr4g0396791 Rosa chinensis HOM05D000256 ORTHO05D000119 3.1e-06 55.8 118 33.1
SalBow4G1737 Salvia bowleyana HOM05D000256 ORTHO05D000119 3.1e-06 55.8 77 36.4
unitig_736.g22327 Utricularia gibba HOM05D000256 ORTHO05D000119 4.0e-06 55.5 107 33.6
COL.COLO4_11200 Corchorus olitorius HOM05D000256 ORTHO05D000119 5.3e-06 55.1 94 36.2
Oeu061052.1 Olea europaea HOM05D000256 ORTHO05D000119 5.3e-06 55.1 114 37.7
Rhsim09G0049800 Rhododendron simsii HOM05D000256 ORTHO05D000119 5.3e-06 55.1 96 31.2
SalBow4G1752 Salvia bowleyana HOM05D000256 ORTHO05D000119 5.3e-06 55.1 67 41.8
Sed0019226 Sechium edule HOM05D000256 ORTHO05D000119 5.3e-06 55.1 116 31.0
Sc05g0002260 Simmondsia chinensis HOM05D000256 ORTHO05D000119 5.3e-06 55.1 110 33.6
Thhalv10009662m.g Eutrema salsugineum HOM05D000256 ORTHO05D000119 6.9e-06 54.7 96 32.3
Carub.0002s1159 Capsella rubella HOM05D000256 ORTHO05D000119 9.0e-06 54.3 122 31.1
CiPaw.04G108000 Carya illinoinensis HOM05D000256 ORTHO05D000119 9.0e-06 54.3 107 35.5


User provided reference genes

Program Settings