Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold196G40958 Striga asiatica HOM05D000314 ORTHO05D000189 3.2e-130 468.4 232 100.0
Migut.H00907 Erythranthe guttata HOM05D000314 ORTHO05D000189 1.4e-21 107.5 175 44.0
Cc07_g03220 Coffea canephora HOM05D000314 ORTHO05D000189 5.0e-14 82.4 173 37.0
MSTRG.23950 Avicennia marina HOM05D000314 ORTHO05D000189 7.2e-13 78.6 170 36.5
Sopen02g032570 Solanum pennellii HOM05D000314 ORTHO05D000189 3.6e-12 76.3 161 38.5
PGSC0003DMG400001319 Solanum tuberosum HOM05D000314 ORTHO05D000189 4.7e-12 75.9 158 38.6
Solyc02g087850.1 Solanum lycopersicum HOM05D000314 ORTHO05D000189 6.1e-12 75.5 161 39.1
CAN.G206.139 Capsicum annuum HOM05D000314 ORTHO05D000189 1.8e-11 73.9 162 38.9
Nitab4.5_0000564g0160 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.1e-10 71.2 161 37.9
Oeu050218.1 Olea europaea HOM05D000314 ORTHO05D000189 3.3e-10 69.7 163 36.2
DCAR_006727 Daucus carota HOM05D000314 ORTHO05D000189 5.7e-10 68.9 158 36.7
MSTRG.3227 Avicennia marina HOM05D000314 ORTHO05D000189 1.3e-09 67.8 160 35.6
Peaxi162Scf00129g00313 Petunia axillaris HOM05D000314 ORTHO05D000189 6.3e-09 65.5 160 35.0
Nitab4.5_0006635g0010 Nicotiana tabacum HOM05D000314 ORTHO05D000189 1.4e-08 64.3 142 38.0
TWI32G0863 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 1.4e-08 64.3 173 31.2
Dinv33742 Davidia involucrata HOM05D000314 ORTHO05D000189 1.8e-08 63.9 164 34.8
Prupe.3G269700 Prunus persica HOM05D000314 ORTHO05D000189 2.4e-08 63.5 180 35.0
Sc11g0007010 Simmondsia chinensis HOM05D000314 ORTHO05D000189 3.1e-08 63.2 159 37.7
Nitab4.5_0000274g0100 Nicotiana tabacum HOM05D000314 ORTHO05D000189 5.3e-08 62.4 142 34.5
CiPaw.03G028700 Carya illinoinensis HOM05D000314 ORTHO05D000189 7.0e-08 62.0 171 32.2
QL02p081436 Quercus lobata HOM05D000314 ORTHO05D000189 7.0e-08 62.0 102 42.2
Oeu062120.1 Olea europaea HOM05D000314 ORTHO05D000189 9.1e-08 61.6 142 39.4
Oeu062122.1 Olea europaea HOM05D000314 ORTHO05D000189 9.1e-08 61.6 142 39.4
TAR622G0623 Trochodendron aralioides HOM05D000314 ORTHO05D000189 9.1e-08 61.6 164 32.3
Actinidia23564 Actinidia chinensis HOM05D000314 ORTHO05D000189 1.2e-07 61.2 141 34.0
Hma1.2p1_1733F.1_g299840 Hydrangea macrophylla HOM05D000314 ORTHO05D000189 1.2e-07 61.2 147 35.4
RcHm_v2.0_Chr2g0168831 Rosa chinensis HOM05D000314 ORTHO05D000189 1.5e-07 60.8 171 32.7
Ah.10g031410 Amaranthus hybridus HOM05D000314 ORTHO05D000189 1.0e-06 58.2 169 34.9
PGR083G2079 Punica granatum HOM05D000314 ORTHO05D000189 1.0e-06 58.2 185 29.2
MD09G1049100 Malus domestica HOM05D000314 ORTHO05D000189 1.3e-06 57.8 166 34.3
Actinidia36022 Actinidia chinensis HOM05D000314 ORTHO05D000189 2.2e-06 57.0 93 36.6
CAN.G179.2 Capsicum annuum HOM05D000314 ORTHO05D000189 2.2e-06 57.0 91 41.8
EL10Ac2g02956 Beta vulgaris HOM05D000314 ORTHO05D000189 5.0e-06 55.8 154 34.4
Sed0016083 Sechium edule HOM05D000314 ORTHO05D000189 5.0e-06 55.8 99 38.4
TWI34G0382 Tripterygium wilfordii HOM05D000314 ORTHO05D000189 8.5e-06 55.1 173 29.5
TAR374G1658 Trochodendron aralioides HOM05D000314 ORTHO05D000189 8.5e-06 55.1 167 32.3


User provided reference genes

Program Settings