Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold195G40788 Striga asiatica HOM05D006546 ORTHO05D008362 9.4e-209 729.9 366 100.0
Migut.C00976 Erythranthe guttata HOM05D006546 ORTHO05D008362 9.8e-166 587.0 361 83.1
MSTRG.1097 Avicennia marina HOM05D006546 ORTHO05D008362 1.6e-163 579.7 366 80.1
SalBow7G0432 Salvia bowleyana HOM05D006546 ORTHO05D008362 1.5e-161 573.2 370 79.5
CSS0026250 Camellia sinensis var. sinensis HOM05D006546 ORTHO05D008362 4.0e-151 538.5 371 74.9
Lj4A701T20 Lonicera japonica HOM05D006546 ORTHO05D008362 7.5e-150 534.3 353 77.1
Nitab4.5_0006961g0030 Nicotiana tabacum HOM05D006546 ORTHO05D008362 8.3e-149 530.8 367 74.4
Cc10_g15070 Coffea canephora HOM05D006546 ORTHO05D008362 2.4e-148 529.3 309 84.1
PGSC0003DMG400006373 Solanum tuberosum HOM05D006546 ORTHO05D008362 4.1e-148 528.5 367 74.7
Solyc04g071700.3 Solanum lycopersicum HOM05D006546 ORTHO05D008362 9.2e-148 527.3 366 74.6
Sopen04g027680 Solanum pennellii HOM05D006546 ORTHO05D008362 9.2e-148 527.3 366 74.6
GSVIVG01034559001 Vitis vinifera HOM05D006546 ORTHO05D008362 1.0e-146 523.9 364 74.7
unitig_747.g21515 Utricularia gibba HOM05D006546 ORTHO05D008362 1.3e-146 523.5 365 75.3
Actinidia17779 Actinidia chinensis HOM05D006546 ORTHO05D008362 6.6e-146 521.2 366 74.3
Lsat_1_v5_gn_1_5280 Lactuca sativa HOM05D006546 ORTHO05D008362 6.6e-146 521.2 332 79.5
ECA247G1092 Erigeron canadensis HOM05D006546 ORTHO05D008362 2.5e-145 519.2 318 80.5
MD05G1030000 Malus domestica HOM05D006546 ORTHO05D008362 5.6e-145 518.1 309 83.5
Potri.005G194800 Populus trichocarpa HOM05D006546 ORTHO05D008362 2.1e-144 516.2 367 74.1
Prupe.8G036900 Prunus persica HOM05D006546 ORTHO05D008362 4.7e-144 515.0 314 81.8
HanXRQChr04g0115661 Helianthus annuus HOM05D006546 ORTHO05D008362 6.2e-144 514.6 301 85.4
PGR042G3407 Punica granatum HOM05D006546 ORTHO05D008362 2.3e-143 512.7 366 72.4
Gorai.002G231100 Gossypium raimondii HOM05D006546 ORTHO05D008362 5.2e-143 511.5 321 81.0
Atru.chr13.2063_Atru.chr13.2062 Acer truncatum HOM05D006546 ORTHO05D008362 2.6e-142 509.2 365 72.9
vmacro01645 Vaccinium macrocarpon HOM05D006546 ORTHO05D008362 2.6e-142 509.2 307 82.7
arahy.Tifrunner.gnm1.ann1.PKA9SD Arachis hypogaea HOM05D006546 ORTHO05D008362 3.4e-142 508.8 306 82.0
Nn5g28792 Nelumbo nucifera HOM05D006546 ORTHO05D008362 3.4e-142 508.8 313 81.5
TWI34G0343 Tripterygium wilfordii HOM05D006546 ORTHO05D008362 4.4e-142 508.4 368 71.7
Manes.18G093500 Manihot esculenta HOM05D006546 ORTHO05D008362 7.6e-142 507.7 368 73.1
Nitab4.5_0001649g0020 Nicotiana tabacum HOM05D006546 ORTHO05D008362 1.3e-141 506.9 369 72.6
AUR62040584 Chenopodium quinoa HOM05D006546 ORTHO05D008362 8.4e-141 504.2 359 73.0
Thecc.08G155700 Theobroma cacao HOM05D006546 ORTHO05D008362 4.1e-140 501.9 372 71.8
CANSAT25G3312 Cannabis sativa HOM05D006546 ORTHO05D008362 5.4e-140 501.5 366 70.5
TAR625G0865 Trochodendron aralioides HOM05D006546 ORTHO05D008362 5.4e-140 501.5 370 71.4
CiPaw.16G009700 Carya illinoinensis HOM05D006546 ORTHO05D008362 7.1e-140 501.1 379 69.9
PSO541G2164 Papaver somniferum HOM05D006546 ORTHO05D008362 7.1e-140 501.1 328 78.7
Cfa018304 Carpinus fangiana HOM05D006546 ORTHO05D008362 9.2e-140 500.7 373 70.5
Rhsim11G0111500 Rhododendron simsii HOM05D006546 ORTHO05D008362 1.6e-139 500.0 317 78.9
Duzib093G0633 Durio zibethinus HOM05D006546 ORTHO05D008362 4.6e-139 498.4 355 74.9
Glyma.16G164900 Glycine max HOM05D006546 ORTHO05D008362 4.6e-139 498.4 366 71.9
FvH4_2g13270 Fragaria vesca HOM05D006546 ORTHO05D008362 6.0e-139 498.0 336 76.5
FAN20G1322 Fragaria x ananassa HOM05D006546 ORTHO05D008362 7.8e-139 497.7 304 81.2
COL.COLO4_03565 Corchorus olitorius HOM05D006546 ORTHO05D008362 1.0e-138 497.3 325 79.1
Hund17460 Selenicereus undatus HOM05D006546 ORTHO05D008362 1.0e-138 497.3 371 69.3
Aqoxy6G00397 Aquilegia oxysepala HOM05D006546 ORTHO05D008362 1.7e-138 496.5 367 70.3
Cpa.g.sc49.98 Carica papaya HOM05D006546 ORTHO05D008362 2.3e-138 496.1 371 70.1
Oeu002061.1 Olea europaea HOM05D006546 ORTHO05D008362 3.9e-138 495.4 303 81.8
QL02p037672 Quercus lobata HOM05D006546 ORTHO05D008362 6.6e-138 494.6 306 81.4
Medtr6g037530 Medicago truncatula HOM05D006546 ORTHO05D008362 1.9e-137 493.0 332 75.9
Phvul.004G092300 Phaseolus vulgaris HOM05D006546 ORTHO05D008362 3.3e-137 492.3 309 79.0
QL02p038646 Quercus lobata HOM05D006546 ORTHO05D008362 4.3e-137 491.9 312 80.4
VMungo0464G1775 Vigna mungo HOM05D006546 ORTHO05D008362 7.3e-137 491.1 309 79.3
Haze_17787 Corylus avellana HOM05D006546 ORTHO05D008362 9.6e-137 490.7 373 69.4
Psat1g100360 Pisum sativum HOM05D006546 ORTHO05D008362 9.6e-137 490.7 307 79.2
Sc26g0002400 Simmondsia chinensis HOM05D006546 ORTHO05D008362 9.6e-137 490.7 363 71.6
Ca_03250_v3 Cicer arietinum L. HOM05D006546 ORTHO05D008362 6.2e-136 488.0 333 75.1
MELO3C008332.2 Cucumis melo HOM05D006546 ORTHO05D008362 1.4e-135 486.9 367 68.9
Lj2g0010381 Lotus japonicus HOM05D006546 ORTHO05D008362 1.4e-135 486.9 340 73.8
FAN15G0764 Fragaria x ananassa HOM05D006546 ORTHO05D008362 4.0e-135 485.3 313 78.3
CsaV3_6G005120 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.2e-135 485.0 305 78.0
CAN.G264.10 Capsicum annuum HOM05D006546 ORTHO05D008362 6.8e-135 484.6 281 84.7
A07p28390 Brassica napus HOM05D006546 ORTHO05D008362 2.0e-134 483.0 341 72.7
BraA07t30475Z Brassica rapa HOM05D006546 ORTHO05D008362 2.6e-134 482.6 341 72.7
Sabra05G0148300 Salix brachista HOM05D006546 ORTHO05D008362 5.8e-134 481.5 421 63.9
Sed0023841 Sechium edule HOM05D006546 ORTHO05D008362 5.8e-134 481.5 319 76.5
AL2G36880 Arabidopsis lyrata HOM05D006546 ORTHO05D008362 1.7e-133 479.9 315 75.9
Peaxi162Scf00079g02332 Petunia axillaris HOM05D006546 ORTHO05D008362 2.2e-133 479.6 368 70.4
BcaC08g45513 Brassica carinata HOM05D006546 ORTHO05D008362 2.9e-133 479.2 334 73.4
C06p31830 Brassica napus HOM05D006546 ORTHO05D008362 6.4e-133 478.0 334 73.7
BolC6t38311H Brassica oleracea HOM05D006546 ORTHO05D008362 6.4e-133 478.0 334 73.7
AT1G76730 Arabidopsis thaliana HOM05D006546 ORTHO05D008362 1.4e-132 476.9 303 78.2
Thhalv10018779m.g Eutrema salsugineum HOM05D006546 ORTHO05D008362 2.4e-132 476.1 303 77.9
Sp5g31870 Schrenkiella parvula HOM05D006546 ORTHO05D008362 9.3e-132 474.2 363 68.0
Carub.0002s2364 Capsella rubella HOM05D006546 ORTHO05D008362 1.2e-131 473.8 315 75.2
Aa31LG4G6800 Aethionema arabicum HOM05D006546 ORTHO05D008362 6.0e-131 471.5 303 77.6
EL10Ac1g01586 Beta vulgaris HOM05D006546 ORTHO05D008362 7.8e-131 471.1 312 76.3
AUR62026675 Chenopodium quinoa HOM05D006546 ORTHO05D008362 7.3e-129 464.5 297 78.5
ATR0584G152 Amborella trichopoda HOM05D006546 ORTHO05D008362 1.8e-127 459.9 319 72.4
BcaB02g07073 Brassica carinata HOM05D006546 ORTHO05D008362 2.9e-125 452.6 285 77.2
Zm00001eb407750 Zea mays HOM05D006546 ORTHO05D008362 1.3e-122 443.7 301 73.4
HPP92_004409 Vanilla planifolia HOM05D006546 ORTHO05D008362 1.4e-119 433.7 299 72.6
ClCG08G007080 Citrullus lanatus HOM05D006546 ORTHO05D008362 2.4e-119 433.0 398 59.5
Os12g0168000 Oryza sativa ssp. japonica HOM05D006546 ORTHO05D008362 1.4e-116 423.7 300 71.0
MBI19_g24720_MAGBIO Magnolia biondii HOM05D006546 ORTHO05D008362 4.6e-115 418.7 512 49.8
Pp3c18_17520 Physcomitrium patens HOM05D006546 ORTHO05D008362 1.0e-114 417.5 329 65.7
AagrBONN_evm.TU.Sc2ySwM_228.4531 Anthoceros agrestis HOM05D006546 ORTHO05D008362 1.3e-114 417.2 309 68.6
CBR_g53679 Chara braunii HOM05D006546 ORTHO05D008362 8.7e-114 414.5 306 69.0
SMO340G0128 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 8.1e-112 407.9 287 70.0
Mapoly0007s0250 Marchantia polymorpha HOM05D006546 ORTHO05D008362 5.3e-111 405.2 313 66.8
arahy.Tifrunner.gnm1.ann1.AD4V0Z Arachis hypogaea HOM05D006546 ORTHO05D008362 2.5e-108 396.4 407 54.5
Ciclev10001828m.g Citrus clementina HOM05D006546 ORTHO05D008362 5.9e-102 375.2 236 79.7
Eucgr.F02694 Eucalyptus grandis HOM05D006546 ORTHO05D008362 1.0e-101 374.4 212 85.8
Cre13.g587450 Chlamydomonas reinhardtii HOM05D006546 ORTHO05D008362 2.2e-101 373.2 305 64.3
FAN27G2273 Fragaria x ananassa HOM05D006546 ORTHO05D008362 5.9e-94 348.6 210 83.3
CsaV3_6G005110 Cucumis sativus L. HOM05D006546 ORTHO05D008362 5.7e-89 332.0 367 52.9
MCO03G555 Micromonas commoda HOM05D006546 ORTHO05D008362 4.8e-88 328.9 317 54.9
CARHR070270 Cardamine hirsuta HOM05D006546 ORTHO05D008362 5.3e-87 325.5 200 80.5
Dinv41054 Davidia involucrata HOM05D006546 ORTHO05D008362 3.8e-85 319.3 170 91.8
Ah.14g079510 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.4e-79 300.8 202 76.7
Gohir.A01G197500 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.0e-79 298.5 205 76.1
Gohir.D01G187700 Gossypium hirsutum HOM05D006546 ORTHO05D008362 7.0e-79 298.5 205 76.1
TPR.G39968 Trifolium pratense HOM05D006546 ORTHO05D008362 3.2e-76 289.7 166 86.1
Ah.00g001170 Amaranthus hybridus HOM05D006546 ORTHO05D008362 1.6e-75 287.3 193 76.7
Ah.14g079490 Amaranthus hybridus HOM05D006546 ORTHO05D008362 3.6e-75 286.2 193 76.2
TPR.G28004 Trifolium pratense HOM05D006546 ORTHO05D008362 2.3e-74 283.5 316 52.5
RcHm_v2.0_Chr6g0274681 Rosa chinensis HOM05D006546 ORTHO05D008362 5.2e-74 282.3 167 83.2
FAN24G0701 Fragaria x ananassa HOM05D006546 ORTHO05D008362 3.7e-72 276.2 189 78.3
SMO137G0185 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 4.8e-72 275.8 257 52.5
THA.LOC104810664 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 1.4e-66 257.7 149 83.2
Glyma.02G080402 Glycine max HOM05D006546 ORTHO05D008362 4.1e-63 246.1 151 79.5
Eucgr.K02158 Eucalyptus grandis HOM05D006546 ORTHO05D008362 2.7e-62 243.4 188 67.6
SMO182G0010 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 9.5e-60 235.0 279 45.9
THA.LOC104803355 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.4e-57 226.5 219 56.2
THA.LOC104820721 Tarenaya hassleriana HOM05D006546 ORTHO05D008362 3.3e-52 209.9 141 73.8
Ah.04g160680 Amaranthus hybridus HOM05D006546 ORTHO05D008362 2.8e-43 180.3 108 83.3
SEGI_13550 Sequoiadendron giganteum HOM05D006546 ORTHO05D008362 1.6e-38 164.5 97 76.3
CDE08G0315 Ceratophyllum demersum HOM05D006546 ORTHO05D008362 9.8e-33 145.2 128 58.6
ECA247G1774 Erigeron canadensis HOM05D006546 ORTHO05D000004 6.4e-32 142.5 145 56.6
MCO02G484 Micromonas commoda HOM05D006546 ORTHO05D008362 1.2e-30 138.3 238 35.3
SMO063G0001 Selaginella moellendorffii HOM05D006546 ORTHO05D008362 7.1e-23 112.5 102 53.9
Hund17461 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.8e-22 109.0 258 32.2
Medtr6g037560 Medicago truncatula HOM05D006546 ORTHO05D008362 5.4e-15 86.3 48 79.2
AagrBONN_evm.TU.Sc2ySwM_228.4528 Anthoceros agrestis HOM05D006546 ORTHO05D008362 2.1e-11 74.3 47 76.6
Sabra02G0052700 Salix brachista HOM05D003387 ORTHO05D005400 8.4e-08 62.4 71 50.7


User provided reference genes

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