Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold186G40138 Striga asiatica HOM05D006552 ORTHO05D008023 1.1e-119 433.3 213 100.0
SGA_v2.0_scaffold7G03676 Striga asiatica HOM05D006552 ORTHO05D008023 8.3e-32 141.4 182 50.5
Dinv04390 Davidia involucrata HOM05D006552 ORTHO05D008023 1.1e-20 104.4 175 44.6
SalBow8G5435 Salvia bowleyana HOM05D006552 ORTHO05D008023 1.6e-19 100.5 157 45.9
Eucgr.E03832 Eucalyptus grandis HOM05D006552 ORTHO05D008023 1.2e-17 94.4 181 41.4
Nn1g07572 Nelumbo nucifera HOM05D006552 ORTHO05D008023 1.2e-17 94.4 181 42.5
DCAR_002248 Daucus carota HOM05D006552 ORTHO05D008023 3.4e-17 92.8 189 39.7
Duzib192G0073 Durio zibethinus HOM05D006552 ORTHO05D008023 4.4e-17 92.4 145 46.9
TAR627G1046 Trochodendron aralioides HOM05D006552 ORTHO05D008023 4.4e-17 92.4 182 41.2
Lsat_1_v5_gn_7_12841 Lactuca sativa HOM05D006552 ORTHO05D008023 5.8e-17 92.0 169 40.8
Lj2A255T60 Lonicera japonica HOM05D006552 ORTHO05D008023 7.5e-17 91.7 139 44.6
vmacro03594 Vaccinium macrocarpon HOM05D006552 ORTHO05D008023 9.8e-17 91.3 182 40.7
VMungo0540G0040 Vigna mungo HOM05D006552 ORTHO05D008023 1.3e-16 90.9 162 42.6
Ca_00774_v3 Cicer arietinum L. HOM05D006552 ORTHO05D008023 1.7e-16 90.5 150 41.3
Nitab4.5_0010199g0040 Nicotiana tabacum HOM05D006552 ORTHO05D008023 1.7e-16 90.5 148 43.2
CiPaw.09G110600 Carya illinoinensis HOM05D006552 ORTHO05D008023 2.2e-16 90.1 167 43.1
Lj6g0006082 Lotus japonicus HOM05D006552 ORTHO05D008023 2.2e-16 90.1 171 38.6
Nitab4.5_0000147g0210 Nicotiana tabacum HOM05D006552 ORTHO05D008023 2.2e-16 90.1 148 43.2
Sc17g0008030 Simmondsia chinensis HOM05D006552 ORTHO05D008023 2.2e-16 90.1 180 40.6
Migut.M01459 Erythranthe guttata HOM05D006552 ORTHO05D008023 2.9e-16 89.7 175 41.1
Glyma.15G121600 Glycine max HOM05D006552 ORTHO05D008023 4.9e-16 89.0 116 50.9
MELO3C021670.2 Cucumis melo HOM05D006552 ORTHO05D008023 6.4e-16 88.6 153 45.1
PSO210G1853 Papaver somniferum HOM05D006552 ORTHO05D008023 6.4e-16 88.6 172 41.3
Phvul.006G136100 Phaseolus vulgaris HOM05D006552 ORTHO05D008023 6.4e-16 88.6 116 50.0
Sabra06G0002900 Salix brachista HOM05D006552 ORTHO05D008023 6.4e-16 88.6 143 42.0
Cpa.g.sc27.207 Carica papaya HOM05D006552 ORTHO05D008023 8.3e-16 88.2 176 40.3
CsaV3_1G015300 Cucumis sativus L. HOM05D006552 ORTHO05D008023 8.3e-16 88.2 153 45.1
Os08g0326100 Oryza sativa ssp. japonica HOM05D006552 ORTHO05D008023 8.3e-16 88.2 151 42.4
Hma1.2p1_0048F.1_g028110 Hydrangea macrophylla HOM05D006552 ORTHO05D008023 1.4e-15 87.4 138 45.7
PGR004G2161 Punica granatum HOM05D006552 ORTHO05D008023 1.4e-15 87.4 176 38.6
HanXRQChr05g0129001 Helianthus annuus HOM05D006552 ORTHO05D008023 1.9e-15 87.0 115 49.6
SalBow8G4188 Salvia bowleyana HOM05D006552 ORTHO05D008023 1.9e-15 87.0 121 48.8
SEGI_31055 Sequoiadendron giganteum HOM05D006552 ORTHO05D008023 1.9e-15 87.0 148 41.2
TWI38G0911 Tripterygium wilfordii HOM05D006552 ORTHO05D008023 1.9e-15 87.0 176 40.3
ClCG01G011480 Citrullus lanatus HOM05D006552 ORTHO05D008023 2.4e-15 86.7 170 41.2
Peaxi162Scf00811g00441 Petunia axillaris HOM05D006552 ORTHO05D008023 2.4e-15 86.7 180 40.0
CSS0027101 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 3.2e-15 86.3 119 48.7
CSS0045827 Camellia sinensis var. sinensis HOM05D006552 ORTHO05D008023 3.2e-15 86.3 119 48.7
Duzib235G0521 Durio zibethinus HOM05D006552 ORTHO05D008023 3.2e-15 86.3 156 41.7
Potri.006G003100 Populus trichocarpa HOM05D006552 ORTHO05D008023 3.2e-15 86.3 181 39.2
Oeu022389.1 Olea europaea HOM05D006552 ORTHO05D008023 4.1e-15 85.9 119 50.4
QL05p066675 Quercus lobata HOM05D006552 ORTHO05D008023 4.1e-15 85.9 177 41.2
Sed0011361 Sechium edule HOM05D006552 ORTHO05D008023 4.1e-15 85.9 116 50.0
Thecc.06G242500 Theobroma cacao HOM05D006552 ORTHO05D008023 4.1e-15 85.9 113 50.4
arahy.Tifrunner.gnm1.ann1.25NBW7 Arachis hypogaea HOM05D006552 ORTHO05D008023 5.4e-15 85.5 116 49.1
arahy.Tifrunner.gnm1.ann1.UF9Q9U Arachis hypogaea HOM05D006552 ORTHO05D008023 5.4e-15 85.5 116 49.1
CANSAT56G3604 Cannabis sativa HOM05D006552 ORTHO05D008023 5.4e-15 85.5 161 41.6
Medtr2g027390 Medicago truncatula HOM05D006552 ORTHO05D008023 5.4e-15 85.5 116 46.6
Psat1g173280 Pisum sativum HOM05D006552 ORTHO05D008023 5.4e-15 85.5 178 38.8
Potri.016G003800 Populus trichocarpa HOM05D006552 ORTHO05D008023 5.4e-15 85.5 201 36.3
Actinidia26617 Actinidia chinensis HOM05D006552 ORTHO05D008023 7.0e-15 85.1 165 38.8
Prupe.4G002500 Prunus persica HOM05D006552 ORTHO05D008023 7.0e-15 85.1 116 46.6
Sabra16G0008800 Salix brachista HOM05D006552 ORTHO05D008023 7.0e-15 85.1 133 43.6
Zm00001eb219360 Zea mays HOM05D006552 ORTHO05D008023 7.0e-15 85.1 114 49.1
CAN.G1456.4 Capsicum annuum HOM05D006552 ORTHO05D008023 9.2e-15 84.7 169 39.6
COL.COLO4_31951 Corchorus olitorius HOM05D002176 ORTHO05D002598 9.2e-15 84.7 181 37.6
PSO210G5261 Papaver somniferum HOM05D006552 ORTHO05D008023 9.2e-15 84.7 173 41.6
ATR0751G220 Amborella trichopoda HOM05D006552 ORTHO05D008023 1.2e-14 84.3 118 46.6
Cfa000018 Carpinus fangiana HOM05D006552 ORTHO05D008023 1.6e-14 84.0 145 43.4
CDE10G1001 Ceratophyllum demersum HOM05D006552 ORTHO05D008023 1.6e-14 84.0 121 46.3
Haze_07043 Corylus avellana HOM05D006552 ORTHO05D008023 1.6e-14 84.0 145 42.8
Gohir.D06G218700 Gossypium hirsutum HOM05D006552 ORTHO05D008023 1.6e-14 84.0 137 45.3
Rhsim13G0138800 Rhododendron simsii HOM05D006552 ORTHO05D008023 1.6e-14 84.0 183 39.9
Actinidia02279 Actinidia chinensis HOM05D006552 ORTHO05D008023 2.0e-14 83.6 173 41.0
EL10Ac8g20280 Beta vulgaris HOM05D006552 ORTHO05D008023 2.0e-14 83.6 163 38.7
CDE10G0757 Ceratophyllum demersum HOM05D006552 ORTHO05D008023 2.0e-14 83.6 117 47.9
Cc09_g00200 Coffea canephora HOM05D006552 ORTHO05D008023 2.0e-14 83.6 166 41.0
Glyma.09G015800 Glycine max HOM05D006552 ORTHO05D008023 2.0e-14 83.6 161 39.8
Gohir.A06G203000 Gossypium hirsutum HOM05D006552 ORTHO05D008023 2.0e-14 83.6 136 43.4
Hund21124 Selenicereus undatus HOM05D006552 ORTHO05D008023 2.0e-14 83.6 120 45.8
Solyc04g015170.3 Solanum lycopersicum HOM05D006552 ORTHO05D008023 2.7e-14 83.2 148 40.5
PGSC0003DMG400019743 Solanum tuberosum HOM05D006552 ORTHO05D008023 2.7e-14 83.2 148 40.5
Zm00001eb049800 Zea mays HOM05D006552 ORTHO05D008023 4.6e-14 82.4 174 37.9
GSVIVG01003475001 Vitis vinifera HOM05D006552 ORTHO05D008023 6.0e-14 82.0 118 46.6
Actinidia12830 Actinidia chinensis HOM05D006552 ORTHO05D008023 7.8e-14 81.6 109 46.8
Ah.12g051860 Amaranthus hybridus HOM05D006552 ORTHO05D008023 7.8e-14 81.6 180 36.7
Gorai.010G247600 Gossypium raimondii HOM05D006552 ORTHO05D008023 7.8e-14 81.6 145 41.4
AUR62043507 Chenopodium quinoa HOM05D006552 ORTHO05D008023 1.0e-13 81.3 166 38.0
MD05G1362800 Malus domestica HOM05D006552 ORTHO05D008023 1.0e-13 81.3 118 43.2
Manes.09G084700 Manihot esculenta HOM05D006552 ORTHO05D008023 1.0e-13 81.3 198 36.4
AUR62022328 Chenopodium quinoa HOM05D006552 ORTHO05D008023 1.3e-13 80.9 109 48.6
Ciclev10015322m.g Citrus clementina HOM05D006552 ORTHO05D008023 1.3e-13 80.9 192 37.0
Lalb_Chr15g0088331 Lupinus albus HOM05D006552 ORTHO05D008023 1.3e-13 80.9 117 47.0
TAR629G0917 Trochodendron aralioides HOM05D006552 ORTHO05D008023 1.7e-13 80.5 194 37.6
Haze_09863 Corylus avellana HOM05D006552 ORTHO05D008023 2.3e-13 80.1 120 46.7
FAN25G2008 Fragaria x ananassa HOM05D006552 ORTHO05D008023 3.0e-13 79.7 103 45.6
MBI15_g38532_MAGBIO Magnolia biondii HOM05D006552 ORTHO05D008023 3.0e-13 79.7 113 46.9
Mapoly0092s0040 Marchantia polymorpha HOM05D006552 ORTHO05D008023 3.0e-13 79.7 103 44.7
MD10G1340400 Malus domestica HOM05D006552 ORTHO05D008023 5.0e-13 79.0 118 43.2
Sopen04g007210 Solanum pennellii HOM05D006552 ORTHO05D008023 5.0e-13 79.0 174 36.2
HPP92_020486 Vanilla planifolia HOM05D006552 ORTHO05D008023 5.0e-13 79.0 192 38.0
FvH4_3g00210 Fragaria vesca HOM05D006552 ORTHO05D008023 6.6e-13 78.6 115 45.2
RcHm_v2.0_Chr5g0000281 Rosa chinensis HOM05D006552 ORTHO05D008023 6.6e-13 78.6 134 39.6
Aa31sc219G30 Aethionema arabicum HOM05D006552 ORTHO05D008023 8.6e-13 78.2 108 46.3
Cfa021888 Carpinus fangiana HOM05D006552 ORTHO05D008023 8.6e-13 78.2 116 48.3
Atru.chr1.2171 Acer truncatum HOM05D006552 ORTHO05D008023 3.3e-12 76.3 107 45.8
CARHR216590 Cardamine hirsuta HOM05D006552 ORTHO05D008023 3.3e-12 76.3 134 40.3
AagrBONN_evm.TU.Sc2ySwM_228.2576 Anthoceros agrestis HOM05D006552 ORTHO05D008023 5.6e-12 75.5 151 37.7
BraA06t27351Z Brassica rapa HOM05D006552 ORTHO05D008023 5.6e-12 75.5 117 42.7
AT5G47790 Arabidopsis thaliana HOM05D006552 ORTHO05D008023 7.3e-12 75.1 156 36.5
AL8G11090 Arabidopsis lyrata HOM05D006552 ORTHO05D008023 9.5e-12 74.7 130 40.0
BolC7t43685H Brassica oleracea HOM05D006552 ORTHO05D008023 1.2e-11 74.3 117 41.9
THA.LOC104806746 Tarenaya hassleriana HOM05D006552 ORTHO05D008023 1.2e-11 74.3 107 43.0
BcaNung06819 Brassica carinata HOM05D006552 ORTHO05D008023 2.1e-11 73.6 117 41.9
C07p31420 Brassica napus HOM05D006552 ORTHO05D008023 2.1e-11 73.6 117 41.9
ECA150G0011 Erigeron canadensis HOM05D006552 ORTHO05D008023 2.1e-11 73.6 139 38.1
A06p44780 Brassica napus HOM05D006552 ORTHO05D008023 2.8e-11 73.2 117 41.9
Thhalv10000925m.g Eutrema salsugineum HOM05D006552 ORTHO05D008023 6.2e-11 72.0 157 36.3
Carub.0008s0068 Capsella rubella HOM05D006552 ORTHO05D008023 8.1e-11 71.6 139 38.1
CBR_g31530 Chara braunii HOM05D006552 ORTHO05D008023 5.2e-10 68.9 94 40.4
unitig_62.g23502 Utricularia gibba HOM05D006552 ORTHO05D008023 1.5e-09 67.4 178 30.3
Pp3c12_14900 Physcomitrium patens HOM05D006552 ORTHO05D008023 4.4e-09 65.9 138 36.2
Dinv07143 Davidia involucrata HOM05D006552 ORTHO05D008023 1.3e-08 64.3 152 36.8
TPR.G10495 Trifolium pratense HOM05D006552 ORTHO05D008023 1.4e-07 60.8 95 41.1
Nn1g07745 Nelumbo nucifera HOM05D006552 ORTHO05D008023 1.2e-06 57.8 36 80.6
SHI24428 Sapria himalayana HOM05D002730 ORTHO05D008023 2.7e-06 56.6 196 28.6


User provided reference genes

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