Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SGA_v2.0_scaffold146G36149 Striga asiatica HOM05D005852 ORTHO05D006688 1.3e-268 929.1 470 100.0
MSTRG.12100 Avicennia marina HOM05D005852 ORTHO05D006688 3.8e-154 548.9 445 68.5
Migut.A00953 Erythranthe guttata HOM05D005852 ORTHO05D006688 1.3e-149 533.9 443 66.6
Dinv33136 Davidia involucrata HOM05D005852 ORTHO05D006688 2.2e-141 506.5 448 62.3
Oeu002340.2 Olea europaea HOM05D005852 ORTHO05D006688 2.2e-141 506.5 464 61.4
CSS0024762 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 2.8e-141 506.1 444 63.3
Duzib138G0780 Durio zibethinus HOM05D005852 ORTHO05D006688 7.7e-139 498.0 439 62.6
Thecc.01G317000 Theobroma cacao HOM05D005852 ORTHO05D006688 1.3e-138 497.3 439 63.1
Solyc08g078610.4 Solanum lycopersicum HOM05D005852 ORTHO05D006688 3.8e-138 495.7 433 61.9
PGSC0003DMG400004761 Solanum tuberosum HOM05D005852 ORTHO05D006688 5.0e-138 495.4 433 61.7
COL.COLO4_23201 Corchorus olitorius HOM05D005852 ORTHO05D006688 8.5e-138 494.6 440 61.8
Sopen08g027090 Solanum pennellii HOM05D005852 ORTHO05D006688 2.5e-137 493.0 433 61.2
Nitab4.5_0014313g0030 Nicotiana tabacum HOM05D005852 ORTHO05D006688 2.1e-136 490.0 446 59.9
MSTRG.25523 Avicennia marina HOM05D005852 ORTHO05D006688 6.1e-136 488.4 450 63.6
Gorai.001G145000 Gossypium raimondii HOM05D005852 ORTHO05D006688 5.2e-135 485.3 439 61.5
GSVIVG01028150001 Vitis vinifera HOM05D005852 ORTHO05D006688 6.7e-135 485.0 430 63.3
Hma1.2p1_0408F.1_g146510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.3e-133 480.7 440 62.3
Gohir.D07G133700 Gossypium hirsutum HOM05D005852 ORTHO05D006688 3.7e-133 479.2 439 60.8
CAN.G1058.28 Capsicum annuum HOM05D005852 ORTHO05D006688 1.4e-132 477.2 439 59.7
QL12p019002 Quercus lobata HOM05D005852 ORTHO05D006688 3.1e-132 476.1 440 61.1
Actinidia17918 Actinidia chinensis HOM05D005852 ORTHO05D006688 5.3e-132 475.3 439 61.0
Cc08_g12410 Coffea canephora HOM05D005852 ORTHO05D006688 9.1e-132 474.6 439 58.8
RcHm_v2.0_Chr3g0487181 Rosa chinensis HOM05D005852 ORTHO05D006688 9.1e-132 474.6 440 61.1
MD17G1278200 Malus domestica HOM05D005852 ORTHO05D006688 1.3e-130 470.7 446 59.9
Duzib133G0199 Durio zibethinus HOM05D005852 ORTHO05D006688 2.2e-130 469.9 439 60.1
Manes.01G230200 Manihot esculenta HOM05D005852 ORTHO05D006688 2.2e-130 469.9 441 61.7
Nitab4.5_0000312g0040 Nicotiana tabacum HOM05D005852 ORTHO05D006688 2.2e-130 469.9 479 55.7
Atru.chr5.963 Acer truncatum HOM05D005852 ORTHO05D006688 3.8e-130 469.2 439 60.8
Haze_05075 Corylus avellana HOM05D005852 ORTHO05D006688 6.5e-130 468.4 460 57.2
FAN26G2795 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.9e-129 466.8 431 61.3
arahy.Tifrunner.gnm1.ann1.BXR415 Arachis hypogaea HOM05D005852 ORTHO05D006688 2.5e-129 466.5 447 58.8
Glyma.03G221000 Glycine max HOM05D005852 ORTHO05D006688 3.2e-129 466.1 445 58.9
FAN28G0451 Fragaria x ananassa HOM05D005852 ORTHO05D006688 5.5e-129 465.3 431 61.3
FAN28G0588 Fragaria x ananassa HOM05D005852 ORTHO05D006688 1.6e-128 463.8 431 60.8
FvH4_1g26940 Fragaria vesca HOM05D005852 ORTHO05D006688 2.1e-128 463.4 431 61.3
FAN19G1535 Fragaria x ananassa HOM05D005852 ORTHO05D006688 3.6e-128 462.6 431 61.0
MD09G1285600 Malus domestica HOM05D005852 ORTHO05D006688 1.0e-127 461.1 440 59.1
arahy.Tifrunner.gnm1.ann1.8ZIL5S Arachis hypogaea HOM05D005852 ORTHO05D006688 3.0e-127 459.5 464 56.9
DCAR_002882 Daucus carota HOM05D005852 ORTHO05D006688 3.0e-127 459.5 438 59.6
Phvul.001G214600 Phaseolus vulgaris HOM05D005852 ORTHO05D006688 6.7e-127 458.4 445 57.8
Eucgr.K03554 Eucalyptus grandis HOM05D005852 ORTHO05D006688 8.8e-127 458.0 441 58.7
Oeu040211.2 Olea europaea HOM05D005852 ORTHO05D006688 1.2e-126 457.6 451 58.8
Ciclev10023332m.g Citrus clementina HOM05D005852 ORTHO05D006688 1.5e-126 457.2 440 59.5
VMungo1383G3312 Vigna mungo HOM05D005852 ORTHO05D006688 2.0e-126 456.8 446 57.2
FAN23G1709 Fragaria x ananassa HOM05D005852 ORTHO05D006688 2.6e-126 456.4 431 60.1
Glyma.19G218000 Glycine max HOM05D005852 ORTHO05D006688 5.7e-126 455.3 441 58.5
CsaV3_3G026570 Cucumis sativus L. HOM05D005852 ORTHO05D006688 9.7e-126 454.5 434 59.7
Rhsim13G0003100 Rhododendron simsii HOM05D005852 ORTHO05D006688 9.7e-126 454.5 459 58.2
Lalb_Chr18g0046571 Lupinus albus HOM05D005852 ORTHO05D006688 1.7e-125 453.8 442 58.6
ClCG10G011590 Citrullus lanatus HOM05D005852 ORTHO05D006688 2.8e-125 453.0 458 57.6
Peaxi162Scf00174g00140 Petunia axillaris HOM05D005852 ORTHO05D006688 8.3e-125 451.4 482 53.9
TAR362G0299 Trochodendron aralioides HOM05D005852 ORTHO05D006688 8.3e-125 451.4 440 59.3
Lj1g0015719 Lotus japonicus HOM05D005852 ORTHO05D006688 1.1e-124 451.1 446 57.2
Prupe.3G008300 Prunus persica HOM05D005852 ORTHO05D006688 1.1e-124 451.1 440 58.6
Hma1.2p1_0486F.1_g163510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 1.4e-124 450.7 438 58.7
Potri.002G192800 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.3e-122 444.1 438 58.0
TWI36G1268 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 2.9e-122 443.0 428 59.6
vmacro02386 Vaccinium macrocarpon HOM05D005852 ORTHO05D006688 3.2e-121 439.5 453 57.2
CANSAT25G1874 Cannabis sativa HOM05D005852 ORTHO05D006688 4.2e-121 439.1 413 60.3
Potri.014G118100 Populus trichocarpa HOM05D005852 ORTHO05D006688 1.6e-120 437.2 441 57.8
TPR.G4094 Trifolium pratense HOM05D005852 ORTHO05D006688 1.6e-120 437.2 451 55.4
TWI75G1100 Tripterygium wilfordii HOM05D005852 ORTHO05D006688 1.4e-119 434.1 431 56.6
CSS0026378 Camellia sinensis var. sinensis HOM05D005852 ORTHO05D006688 3.4e-118 429.5 495 52.5
Aqoxy5G02690 Aquilegia oxysepala HOM05D005852 ORTHO05D006688 4.4e-118 429.1 431 58.7
Ca_09223_v3 Cicer arietinum L. HOM05D005852 ORTHO05D006688 1.8e-116 423.7 457 53.8
unitig_21.g20328 Utricularia gibba HOM05D005852 ORTHO05D006688 1.8e-116 423.7 467 53.5
Sabra02G0163100 Salix brachista HOM05D005852 ORTHO05D006688 3.5e-115 419.5 496 52.2
Sc05g0000300 Simmondsia chinensis HOM05D005852 ORTHO05D006688 1.2e-112 411.0 445 54.4
Hund17504 Selenicereus undatus HOM05D005852 ORTHO05D006688 1.0e-111 407.9 469 52.5
EL10Ac1g01717 Beta vulgaris HOM05D005852 ORTHO05D006688 1.4e-111 407.5 487 51.5
PGR044G1849 Punica granatum HOM05D005852 ORTHO05D006688 4.0e-111 406.0 422 55.9
Psat3g018920 Pisum sativum HOM05D005852 ORTHO05D006688 1.5e-110 404.1 442 52.9
THA.LOC104802145 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 1.5e-110 404.1 435 53.6
PSO761G0671 Papaver somniferum HOM05D005852 ORTHO05D006688 4.4e-110 402.5 494 49.4
AT3G62330 Arabidopsis thaliana HOM05D005852 ORTHO05D006688 3.7e-109 399.4 450 53.3
CiPaw.08G087500 Carya illinoinensis HOM05D005852 ORTHO05D006688 3.7e-109 399.4 436 54.6
PSO210G2075 Papaver somniferum HOM05D005852 ORTHO05D006688 3.7e-109 399.4 494 49.0
AL2G23460 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 6.3e-109 398.7 445 53.5
AL5G45080 Arabidopsis lyrata HOM05D005852 ORTHO05D006688 3.1e-108 396.4 445 53.3
Carub.0005s2904 Capsella rubella HOM05D005852 ORTHO05D006688 4.1e-108 396.0 443 53.0
Sp5g01060 Schrenkiella parvula HOM05D005852 ORTHO05D006688 2.0e-107 393.7 429 54.1
THA.LOC104817449 Tarenaya hassleriana HOM05D005852 ORTHO05D006688 5.9e-107 392.1 447 53.2
MELO3C012930.2 Cucumis melo HOM05D005852 ORTHO05D006688 1.3e-106 391.0 362 62.2
ECA247G2785 Erigeron canadensis HOM05D005852 ORTHO05D006688 1.3e-106 391.0 445 51.9
TAR365G0405 Trochodendron aralioides HOM05D005852 ORTHO05D006688 8.6e-106 388.3 460 50.7
Sed0012344 Sechium edule HOM05D005852 ORTHO05D006688 1.1e-105 387.9 362 61.9
Lsat_1_v5_gn_8_166621 Lactuca sativa HOM05D005852 ORTHO05D006688 5.6e-105 385.6 439 53.3
A09p54330 Brassica napus HOM05D005852 ORTHO05D006688 9.5e-105 384.8 441 52.8
Cpa.g.sc18.85 Carica papaya HOM05D005852 ORTHO05D006688 1.6e-104 384.0 370 59.5
MBI18_g35540_MAGBIO Magnolia biondii HOM05D005852 ORTHO05D006688 4.7e-104 382.5 452 50.7
Lj1A15T56 Lonicera japonica HOM05D005852 ORTHO05D006688 6.1e-104 382.1 456 53.1
BraA09t40845Z Brassica rapa HOM05D005852 ORTHO05D006688 8.0e-104 381.7 459 51.2
Thhalv10005921m.g Eutrema salsugineum HOM05D005852 ORTHO05D006688 4.0e-103 379.4 449 52.1
HanXRQChr10g0284731 Helianthus annuus HOM05D005852 ORTHO05D006688 4.0e-103 379.4 445 51.7
CARHR172660 Cardamine hirsuta HOM05D005852 ORTHO05D006688 6.8e-103 378.6 433 53.8
BolC8t51298H Brassica oleracea HOM05D005852 ORTHO05D006688 1.5e-102 377.5 445 51.9
C08p37210 Brassica napus HOM05D005852 ORTHO05D006688 2.4e-100 370.2 445 50.8
Ah.05g168400 Amaranthus hybridus HOM05D005852 ORTHO05D006688 2.7e-99 366.7 505 46.5
TAR633G0114 Trochodendron aralioides HOM05D005852 ORTHO05D006688 2.1e-96 357.1 338 60.4
Aa31LG10G16270 Aethionema arabicum HOM05D005852 ORTHO05D006688 1.1e-95 354.8 507 45.0
ATR0693G434 Amborella trichopoda HOM05D005852 ORTHO05D006688 1.4e-95 354.4 445 49.9
SHI33189 Sapria himalayana HOM05D005852 ORTHO05D006688 7.1e-92 342.0 500 44.8
CDE02G4238 Ceratophyllum demersum HOM05D005852 ORTHO05D006688 5.1e-90 335.9 437 50.1
AUR62034930 Chenopodium quinoa HOM05D005852 ORTHO05D006688 5.1e-90 335.9 476 46.4
AUR62022309 Chenopodium quinoa HOM05D005852 ORTHO05D006688 1.9e-89 334.0 478 45.8
CiPaw.07G119700 Carya illinoinensis HOM05D005852 ORTHO05D006688 9.6e-81 305.1 255 65.1
C02p58000 Brassica napus HOM05D005852 ORTHO05D006688 4.9e-69 266.2 220 64.1
C02p35770 Brassica napus HOM05D005852 ORTHO05D006688 6.4e-69 265.8 220 64.1
Gohir.A07G129400 Gossypium hirsutum HOM05D005852 ORTHO05D006688 7.1e-68 262.3 290 52.8
BolC2t11869H Brassica oleracea HOM05D005852 ORTHO05D006688 4.3e-65 253.1 214 63.6
Os01g0252900 Oryza sativa ssp. japonica HOM05D005852 ORTHO05D006688 6.9e-63 245.7 246 57.3
Zm00001eb333730 Zea mays HOM05D005852 ORTHO05D006688 8.4e-61 238.8 254 54.3
Nn3g21757 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.6e-59 234.6 173 69.9
HPP92_012784 Vanilla planifolia HOM05D005852 ORTHO05D006688 1.8e-55 221.1 328 43.3
SEGI_21105 Sequoiadendron giganteum HOM05D005852 ORTHO05D006688 1.7e-53 214.5 414 37.4
Mapoly0068s0092 Marchantia polymorpha HOM05D005852 ORTHO05D006688 5.0e-45 186.4 488 32.8
AagrBONN_evm.TU.Sc2ySwM_344.2258 Anthoceros agrestis HOM05D004246 ORTHO05D005035 1.2e-43 181.8 445 33.3
SMO236G0022 Selaginella moellendorffii HOM05D017472 ORTHO05D006688 3.5e-43 180.3 413 37.8
SGA_v2.0_scaffold120G32887 Striga asiatica HOM05D005852 ORTHO05D006688 7.4e-41 172.6 125 73.6
SEGI_29962 Sequoiadendron giganteum HOM05D005852 ORTHO05D000002 1.2e-38 165.2 439 34.2
Hma1.2p1_0055F.1_g031510 Hydrangea macrophylla HOM05D005852 ORTHO05D006688 5.9e-38 162.9 180 52.8
BcaNung00812 Brassica carinata HOM05D005852 ORTHO05D006688 1.5e-33 148.3 126 62.7
Pp3c2_16330 Physcomitrium patens HOM05D005852 ORTHO05D006688 7.4e-33 146.0 186 43.5
AUR62032106 Chenopodium quinoa HOM05D005852 ORTHO05D006688 9.7e-33 145.6 332 34.6
Nn4g25538 Nelumbo nucifera HOM05D005852 ORTHO05D006688 1.1e-31 142.1 100 74.0
Pp3c1_21140 Physcomitrium patens HOM05D005852 ORTHO05D006688 1.9e-28 131.3 430 30.0
CDE08G0400 Ceratophyllum demersum HOM05D004749 ORTHO05D005995 4.2e-28 130.2 194 42.3
CBR_g31172 Chara braunii HOM05D005852 ORTHO05D006688 7.0e-23 112.8 447 26.0
BolC5t33669H Brassica oleracea HOM05D005852 ORTHO05D006688 6.1e-19 99.8 80 65.0
Lsat_1_v5_gn_3_89981 Lactuca sativa HOM05D005852 ORTHO05D006688 6.1e-11 73.2 41 80.5
Actinidia20978 Actinidia chinensis HOM05D005852 ORTHO05D006688 1.8e-10 71.6 89 47.2
Nn3g21758 Nelumbo nucifera HOM05D005852 ORTHO05D006688 7.7e-06 56.2 72 45.8


User provided reference genes

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