Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37771 Sequoiadendron giganteum HOM05D000113 ORTHO05D001798 8.1e-62 240.4 131 100.0
Eucgr.E02662 Eucalyptus grandis HOM05D000113 ORTHO05D001798 4.3e-15 85.1 52 86.5
Sabra04G0034100 Salix brachista HOM05D000113 ORTHO05D001798 1.3e-14 83.6 52 80.8
Atru.chr10.1736 Acer truncatum HOM05D000113 ORTHO05D001798 6.3e-14 81.3 52 78.8
Potri.004G052700 Populus trichocarpa HOM05D000113 ORTHO05D001798 6.3e-14 81.3 52 76.9
Ciclev10014624m.g Citrus clementina HOM05D000113 ORTHO05D001798 1.4e-13 80.1 52 78.8
Glyma.13G232900 Glycine max HOM05D000113 ORTHO05D001798 1.8e-13 79.7 52 76.9
Glyma.15G079700 Glycine max HOM05D000113 ORTHO05D001798 1.8e-13 79.7 52 76.9
Phvul.006G179000 Phaseolus vulgaris HOM05D000113 ORTHO05D001798 1.8e-13 79.7 52 76.9
VMungo0540G1745 Vigna mungo HOM05D000113 ORTHO05D001798 1.8e-13 79.7 52 76.9
CANSAT35G0927 Cannabis sativa HOM05D000113 ORTHO05D001798 3.1e-13 79.0 52 76.9
Ca_00411_v3 Cicer arietinum L. HOM05D000113 ORTHO05D001798 3.1e-13 79.0 52 76.9
Lj6g0016463 Lotus japonicus HOM05D000113 ORTHO05D001798 3.1e-13 79.0 52 76.9
TPR.G11663 Trifolium pratense HOM05D000113 ORTHO05D001798 3.1e-13 79.0 52 76.9
CiPaw.09G066700 Carya illinoinensis HOM05D000113 ORTHO05D001798 4.1e-13 78.6 52 78.8
CsaV3_1G012660 Cucumis sativus L. HOM05D000113 ORTHO05D001798 4.1e-13 78.6 52 76.9
Medtr2g015320 Medicago truncatula HOM05D000113 ORTHO05D001798 4.1e-13 78.6 52 76.9
Thecc.06G176600 Theobroma cacao HOM05D000113 ORTHO05D001798 4.1e-13 78.6 52 75.0
GSVIVG01021163001 Vitis vinifera HOM05D000113 ORTHO05D001798 4.1e-13 78.6 52 76.9
CSS0027215 Camellia sinensis var. sinensis HOM05D000113 ORTHO05D001798 5.3e-13 78.2 52 75.0
COL.COLO4_31356 Corchorus olitorius HOM05D000113 ORTHO05D001798 5.3e-13 78.2 52 76.9
Psat1g200640 Pisum sativum HOM05D000113 ORTHO05D001798 5.3e-13 78.2 52 76.9
THA.LOC104806145 Tarenaya hassleriana HOM05D000113 ORTHO05D001798 5.3e-13 78.2 52 76.9
Aqoxy4G00513 Aquilegia oxysepala HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 71.2
arahy.Tifrunner.gnm1.ann1.4TP3R5 Arachis hypogaea HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 73.1
arahy.Tifrunner.gnm1.ann1.YHQH5W Arachis hypogaea HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 73.1
Migut.M01073 Erythranthe guttata HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 73.1
Gohir.A10G029900 Gossypium hirsutum HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 75.0
Gohir.D10G030500 Gossypium hirsutum HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 75.0
Gorai.011G032400 Gossypium raimondii HOM05D000113 ORTHO05D001798 9.0e-13 77.4 52 75.0
AagrBONN_evm.TU.Sc2ySwM_117.2483 Anthoceros agrestis HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 75.0
BcaC09g51504 Brassica carinata HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 73.1
BcaNung05873 Brassica carinata HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 73.1
BolC1t01216H Brassica oleracea HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 73.1
Carub.0007s2276 Capsella rubella HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 73.1
Cpa.g.sc7.26 Carica papaya HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 75.0
Thhalv10024567m.g Eutrema salsugineum HOM05D000113 ORTHO05D001798 1.2e-12 77.0 52 73.1
Lj2C295G3 Lonicera japonica HOM05D000113 ORTHO05D001798 1.2e-12 77.0 79 57.0
AL7G35810 Arabidopsis lyrata HOM05D000113 ORTHO05D001798 1.5e-12 76.6 52 71.2
Lalb_Chr15g0089551 Lupinus albus HOM05D000113 ORTHO05D001798 1.5e-12 76.6 52 73.1
vmacro15958 Vaccinium macrocarpon HOM05D000113 ORTHO05D001798 1.5e-12 76.6 52 73.1
Actinidia39496 Actinidia chinensis HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 75.0
AT4G18465 Arabidopsis thaliana HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 73.1
CARHR225310 Cardamine hirsuta HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 73.1
Dinv40643 Davidia involucrata HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 73.1
Duzib235G0852 Durio zibethinus HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 76.9
MD05G1305600 Malus domestica HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 75.0
Rhsim02G0139000 Rhododendron simsii HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 71.2
Sp7g15550 Schrenkiella parvula HOM05D000113 ORTHO05D001798 2.0e-12 76.3 52 73.1
Aa31LG6G1220 Aethionema arabicum HOM05D000113 ORTHO05D001798 2.6e-12 75.9 52 73.1
A01p10440 Brassica napus HOM05D000113 ORTHO05D001798 2.6e-12 75.9 52 71.2
C01p12420 Brassica napus HOM05D000113 ORTHO05D001798 2.6e-12 75.9 52 71.2
BraA01t00990Z Brassica rapa HOM05D000113 ORTHO05D001798 2.6e-12 75.9 52 71.2
FvH4_5g21450 Fragaria vesca HOM05D000113 ORTHO05D001798 3.4e-12 75.5 52 78.8
FAN18G3199 Fragaria x ananassa HOM05D000113 ORTHO05D001798 3.4e-12 75.5 52 78.8
Manes.17G052600 Manihot esculenta HOM05D000113 ORTHO05D001798 3.4e-12 75.5 52 78.8
RcHm_v2.0_Chr5g0009991 Rosa chinensis HOM05D000113 ORTHO05D001798 3.4e-12 75.5 52 78.8
Sed0004866 Sechium edule HOM05D000113 ORTHO05D001798 3.4e-12 75.5 52 73.1
AUR62031132 Chenopodium quinoa HOM05D000113 ORTHO05D001798 4.5e-12 75.1 52 75.0
Nn1g08998 Nelumbo nucifera HOM05D000113 ORTHO05D001798 4.5e-12 75.1 52 73.1
PGR042G0655 Punica granatum HOM05D000113 ORTHO05D001798 4.5e-12 75.1 52 73.1
Ah.09g237860 Amaranthus hybridus HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 73.1
Peaxi162Scf00286g00825 Petunia axillaris HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 71.2
Solyc09g097820.3 Solanum lycopersicum HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 71.2
Sopen09g035760 Solanum pennellii HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 71.2
PGSC0003DMG402017925 Solanum tuberosum HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 71.2
SGA_v2.0_scaffold440G51660 Striga asiatica HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 73.1
unitig_60.g25786 Utricularia gibba HOM05D000113 ORTHO05D001798 5.9e-12 74.7 52 69.2
FAN08G2639 Fragaria x ananassa HOM05D000113 ORTHO05D001798 7.6e-12 74.3 52 76.9
FAN13G0139 Fragaria x ananassa HOM05D000113 ORTHO05D001798 7.6e-12 74.3 52 76.9
TAR624G1113 Trochodendron aralioides HOM05D000113 ORTHO05D001798 7.6e-12 74.3 52 73.1
EL10Ac8g20481 Beta vulgaris HOM05D000113 ORTHO05D001798 1.0e-11 73.9 52 73.1
Nitab4.5_0000309g0350 Nicotiana tabacum HOM05D000113 ORTHO05D001798 1.0e-11 73.9 52 69.2
PSO210G4174 Papaver somniferum HOM05D000113 ORTHO05D001798 1.0e-11 73.9 51 70.6
Zm00001eb120110 Zea mays HOM05D000113 ORTHO05D001798 1.3e-11 73.6 52 71.2
CAN.G742.42 Capsicum annuum HOM05D000113 ORTHO05D001798 1.7e-11 73.2 52 69.2
AUR62036538 Chenopodium quinoa HOM05D000113 ORTHO05D001798 1.7e-11 73.2 52 73.1
HanXRQChr04g0117181 Helianthus annuus HOM05D000113 ORTHO05D001798 2.2e-11 72.8 52 73.1
Oeu026694.1 Olea europaea HOM05D000113 ORTHO05D001798 2.2e-11 72.8 52 69.2
Prupe.4G056700 Prunus persica HOM05D000113 ORTHO05D001798 2.2e-11 72.8 52 73.1
ECA236G0415 Erigeron canadensis HOM05D000113 ORTHO05D001798 2.9e-11 72.4 52 71.2
Hma1.2p1_0155F.1_g068480 Hydrangea macrophylla HOM05D000113 ORTHO05D001798 2.9e-11 72.4 52 76.9
SGA_v2.0_scaffold1G00001 Striga asiatica HOM05D000965 ORTHO05D001798 2.9e-11 72.4 52 71.2
CDE04G2218 Ceratophyllum demersum HOM05D000113 ORTHO05D001798 3.8e-11 72.0 52 75.0
Cc02_g14380 Coffea canephora HOM05D000113 ORTHO05D001798 5.0e-11 71.6 52 67.3
PSO832G2438 Papaver somniferum HOM05D000113 ORTHO05D001798 5.0e-11 71.6 51 68.6
Sc05g0007250 Simmondsia chinensis HOM05D000113 ORTHO05D001798 5.0e-11 71.6 52 73.1
HPP92_002846 Vanilla planifolia HOM05D000113 ORTHO05D001798 8.4e-11 70.9 52 73.1
Mapoly0080s0021 Marchantia polymorpha HOM05D000113 ORTHO05D001798 1.4e-10 70.1 52 69.2
Lsat_1_v5_gn_7_23681 Lactuca sativa HOM05D000113 ORTHO05D001798 2.5e-10 69.3 52 69.2
ATR0602G052 Amborella trichopoda HOM05D000113 ORTHO05D001798 2.1e-09 66.2 52 63.5
Lsat_1_v5_gn_9_11180 Lactuca sativa HOM05D000034 ORTHO05D000277 6.1e-09 64.7 54 61.1
CBR_g17902 Chara braunii HOM05D000113 ORTHO05D001798 1.0e-08 63.9 52 59.6
ClCG03G007910 Citrullus lanatus HOM05D000113 ORTHO05D001798 1.3e-08 63.5 51 68.6
SEGI_01859 Sequoiadendron giganteum HOM05D003751 ORTHO05D017703 5.1e-08 61.6 36 91.7


User provided reference genes

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