Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_37443 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 1.7e-63 245.7 118 100.0
SEGI_33125 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 2.6e-11 72.4 38 78.9
SEGI_23902 Sequoiadendron giganteum HOM05D008019 ORTHO05D010184 3.8e-10 68.6 38 73.7
Gohir.A12G094001 Gossypium hirsutum HOM05D008019 ORTHO05D010184 5.5e-09 64.7 38 65.8
Gorai.008G105200 Gossypium raimondii HOM05D008019 ORTHO05D010184 5.5e-09 64.7 38 65.8
THA.LOC104819690 Tarenaya hassleriana HOM05D008019 ORTHO05D010184 2.1e-08 62.8 38 65.8
COL.COLO4_23925 Corchorus olitorius HOM05D008019 ORTHO05D010184 2.7e-08 62.4 38 63.2
Lj9A631G50 Lonicera japonica HOM05D008019 ORTHO05D010184 3.5e-08 62.0 38 63.2
Aqoxy7G00800 Aquilegia oxysepala HOM05D008019 ORTHO05D010184 6.0e-08 61.2 32 78.1
PGR044G0644 Punica granatum HOM05D008019 ORTHO05D010184 7.9e-08 60.8 38 60.5
Sabra09G0046100 Salix brachista HOM05D000752 ORTHO05D000572 1.3e-07 60.1 38 60.5
SalBow5G2002 Salvia bowleyana HOM05D008019 ORTHO05D010184 1.3e-07 60.1 31 77.4
arahy.Tifrunner.gnm1.ann1.SF3C2I Arachis hypogaea HOM05D008019 ORTHO05D010184 1.8e-07 59.7 38 60.5
arahy.Tifrunner.gnm1.ann1.V37GBM Arachis hypogaea HOM05D008019 ORTHO05D010184 1.8e-07 59.7 38 60.5
CAN.G1155.15 Capsicum annuum HOM05D008019 ORTHO05D010184 1.8e-07 59.7 38 60.5
Cfa010760 Carpinus fangiana HOM05D008019 ORTHO05D010184 1.8e-07 59.7 38 60.5
Lj3g0025736 Lotus japonicus HOM05D008019 ORTHO05D010184 1.8e-07 59.7 38 60.5
Dinv43452 Davidia involucrata HOM05D008019 ORTHO05D010184 2.3e-07 59.3 38 60.5
Manes.07G005100 Manihot esculenta HOM05D008019 ORTHO05D010184 2.3e-07 59.3 32 71.9
QL04p007219 Quercus lobata HOM05D008019 ORTHO05D010184 2.3e-07 59.3 38 60.5
Rhsim07G0054900 Rhododendron simsii HOM05D008019 ORTHO05D010184 2.3e-07 59.3 38 60.5
TWI09G1168 Tripterygium wilfordii HOM05D008019 ORTHO05D010184 2.3e-07 59.3 38 60.5
ClCG09G004230 Citrullus lanatus HOM05D008019 ORTHO05D010184 3.0e-07 58.9 32 68.8
Oeu010780.1 Olea europaea HOM05D008019 ORTHO05D010184 3.0e-07 58.9 32 71.9
Potri.001G268000 Populus trichocarpa HOM05D008019 ORTHO05D010184 3.0e-07 58.9 38 57.9
Sc10g0000030 Simmondsia chinensis HOM05D008019 ORTHO05D010184 3.0e-07 58.9 53 49.1
vmacro13657 Vaccinium macrocarpon HOM05D008019 ORTHO05D010184 3.0e-07 58.9 38 60.5
MSTRG.17046 Avicennia marina HOM05D008019 ORTHO05D010184 3.9e-07 58.5 37 62.2
Eucgr.J01265 Eucalyptus grandis HOM05D008019 ORTHO05D010184 3.9e-07 58.5 38 57.9
Lsat_1_v5_gn_1_107820 Lactuca sativa HOM05D008019 ORTHO05D010184 3.9e-07 58.5 38 57.9
Nn2g15438 Nelumbo nucifera HOM05D008019 ORTHO05D010184 3.9e-07 58.5 38 60.5
Thecc.01G411900 Theobroma cacao HOM05D008019 ORTHO05D010184 3.9e-07 58.5 38 57.9
GSVIVG01032075001 Vitis vinifera HOM05D008019 ORTHO05D010184 3.9e-07 58.5 37 62.2
Actinidia31058 Actinidia chinensis HOM05D008019 ORTHO05D010184 5.1e-07 58.2 38 57.9
ATR0605G214 Amborella trichopoda HOM05D008019 ORTHO05D010184 5.1e-07 58.2 38 57.9
CSS0044570 Camellia sinensis var. sinensis HOM05D008019 ORTHO05D010184 5.1e-07 58.2 35 62.9
ECA248G1827 Erigeron canadensis HOM05D008019 ORTHO05D010184 5.1e-07 58.2 38 57.9
FAN10G3815 Fragaria x ananassa HOM05D008019 ORTHO05D010184 5.1e-07 58.2 32 68.8
Hund19732 Selenicereus undatus HOM05D008019 ORTHO05D010184 5.1e-07 58.2 38 60.5
Haze_03214 Corylus avellana HOM05D008019 ORTHO05D010184 6.7e-07 57.8 38 57.9
HanXRQChr01g0016161 Helianthus annuus HOM05D008019 ORTHO05D010184 6.7e-07 57.8 38 57.9
MBI04_g13624_MAGBIO Magnolia biondii HOM05D008019 ORTHO05D010184 6.7e-07 57.8 32 68.8
TAR623G0854 Trochodendron aralioides HOM05D008019 ORTHO05D010184 6.7e-07 57.8 38 57.9
unitig_750.g28450 Utricularia gibba HOM05D008019 ORTHO05D010184 6.7e-07 57.8 38 60.5
MELO3C023543.2 Cucumis melo HOM05D008019 ORTHO05D010184 8.7e-07 57.4 32 65.6
CsaV3_7G031160 Cucumis sativus L. HOM05D008019 ORTHO05D010184 8.7e-07 57.4 32 65.6
Lalb_Chr19g0132131 Lupinus albus HOM05D008019 ORTHO05D010184 8.7e-07 57.4 38 55.3
MD02G1313500 Malus domestica HOM05D008019 ORTHO05D010184 8.7e-07 57.4 32 68.8
TPR.G1886 Trifolium pratense HOM05D008019 ORTHO05D010184 8.7e-07 57.4 35 62.9
TAR623G1004 Trochodendron aralioides HOM05D008019 ORTHO05D010184 8.7e-07 57.4 38 55.3
Os09g0485800 Oryza sativa ssp. japonica HOM05D008019 ORTHO05D010184 1.1e-06 57.0 39 53.8
Potri.009G062400 Populus trichocarpa HOM05D008019 ORTHO05D010184 1.1e-06 57.0 38 57.9
Prupe.2G012100 Prunus persica HOM05D008019 ORTHO05D010184 1.1e-06 57.0 32 68.8
Ciclev10033035m.g Citrus clementina HOM05D008019 ORTHO05D010184 1.5e-06 56.6 38 57.9
Cc02_g27810 Coffea canephora HOM05D008019 ORTHO05D010184 1.5e-06 56.6 31 71.0
Migut.B01317 Erythranthe guttata HOM05D008019 ORTHO05D010184 1.5e-06 56.6 38 57.9
Pp3c14_7420 Physcomitrium patens HOM05D008019 ORTHO05D010184 1.5e-06 56.6 37 59.5
Zm00001eb101810 Zea mays HOM05D008019 ORTHO05D010184 1.5e-06 56.6 38 52.6
Duzib138G0215 Durio zibethinus HOM05D008019 ORTHO05D010184 1.9e-06 56.2 38 57.9
FvH4_7g00910 Fragaria vesca HOM05D008019 ORTHO05D010184 1.9e-06 56.2 32 65.6
FAN01G0739 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.9e-06 56.2 32 65.6
FAN03G3138 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.9e-06 56.2 32 65.6
FAN06G1027 Fragaria x ananassa HOM05D008019 ORTHO05D010184 1.9e-06 56.2 32 65.6
Glyma.12G238000 Glycine max HOM05D008019 ORTHO05D010184 1.9e-06 56.2 37 56.8
Phvul.011G212700 Phaseolus vulgaris HOM05D008019 ORTHO05D010184 1.9e-06 56.2 38 55.3
RcHm_v2.0_Chr1g0315801 Rosa chinensis HOM05D008019 ORTHO05D010184 1.9e-06 56.2 32 65.6
CANSAT80G0909 Cannabis sativa HOM05D008019 ORTHO05D010184 2.5e-06 55.8 32 65.6
VMungo1127G0775 Vigna mungo HOM05D008019 ORTHO05D010184 2.5e-06 55.8 38 52.6
Zm00001eb101800 Zea mays HOM05D008019 ORTHO05D010184 2.5e-06 55.8 38 52.6
SGA_v2.0_scaffold167G38441 Striga asiatica HOM05D008019 ORTHO05D010184 3.3e-06 55.5 38 55.3


User provided reference genes

Program Settings