Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36412 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 5.5e-80 300.8 143 100.0
SEGI_29321 Sequoiadendron giganteum HOM05D001930 ORTHO05D001345 3.5e-26 122.1 74 81.1
Cpa.g.sc19.190 Carica papaya HOM05D001930 ORTHO05D001345 2.3e-09 66.2 75 52.0
MBI14_g28262_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 3.0e-09 65.9 74 51.4
Ah.10g036510 Amaranthus hybridus HOM05D001930 ORTHO05D001345 3.9e-09 65.5 75 50.7
CDE07G0205 Ceratophyllum demersum HOM05D001930 ORTHO05D001345 6.6e-09 64.7 75 50.7
MBI05_g34494_MAGBIO Magnolia biondii HOM05D001930 ORTHO05D001345 1.1e-08 63.9 137 35.0
Nn2g13688 Nelumbo nucifera HOM05D001930 ORTHO05D001345 1.1e-08 63.9 75 50.7
Nn2g11456 Nelumbo nucifera HOM05D001930 ORTHO05D001345 1.9e-08 63.2 75 50.7
ATR0618G241 Amborella trichopoda HOM05D001930 ORTHO05D001345 2.5e-08 62.8 132 39.4
Lalb_Chr18g0052641 Lupinus albus HOM05D001930 ORTHO05D001345 4.3e-08 62.0 77 46.8
SalBow6G0604 Salvia bowleyana HOM05D001930 ORTHO05D001345 4.3e-08 62.0 77 48.1
GSVIVG01032844001 Vitis vinifera HOM05D001930 ORTHO05D001345 4.3e-08 62.0 75 49.3
Aqoxy2G00919 Aquilegia oxysepala HOM05D001930 ORTHO05D001345 5.6e-08 61.6 75 49.3
EL10Ac2g04813 Beta vulgaris HOM05D001930 ORTHO05D001345 5.6e-08 61.6 75 50.7
arahy.Tifrunner.gnm1.ann1.G8RZTB Arachis hypogaea HOM05D001930 ORTHO05D001345 9.5e-08 60.8 77 44.2
arahy.Tifrunner.gnm1.ann1.I8BS46 Arachis hypogaea HOM05D001930 ORTHO05D001345 9.5e-08 60.8 77 44.2
AUR62012234 Chenopodium quinoa HOM05D001930 ORTHO05D001345 9.5e-08 60.8 75 49.3
Sed0016379 Sechium edule HOM05D001930 ORTHO05D001345 9.5e-08 60.8 154 33.8
AL4G37690 Arabidopsis lyrata HOM05D001930 ORTHO05D001345 1.2e-07 60.5 135 37.0
AUR62022866 Chenopodium quinoa HOM05D001930 ORTHO05D001345 1.6e-07 60.1 75 49.3
AT2G40070 Arabidopsis thaliana HOM05D001930 ORTHO05D001345 2.1e-07 59.7 152 35.5
Rhsim03G0142000 Rhododendron simsii HOM05D001930 ORTHO05D001345 2.1e-07 59.7 75 48.0
Sopen03g026190 Solanum pennellii HOM05D001930 ORTHO05D001345 2.1e-07 59.7 75 46.7
SGA_v2.0_scaffold60G20991 Striga asiatica HOM05D001930 ORTHO05D001345 2.1e-07 59.7 77 46.8
CSS0031125 Camellia sinensis var. sinensis HOM05D001930 ORTHO05D001345 2.8e-07 59.3 75 48.0
Carub.0004s2221 Capsella rubella HOM05D001930 ORTHO05D001345 4.7e-07 58.5 153 34.6
TAR369G0785 Trochodendron aralioides HOM05D001930 ORTHO05D001345 4.7e-07 58.5 75 46.7
Atru.chr12.18 Acer truncatum HOM05D001930 ORTHO05D001345 6.2e-07 58.2 78 47.4
MELO3C008291.2 Cucumis melo HOM05D001930 ORTHO05D001345 6.2e-07 58.2 77 44.2
CsaV3_6G001770 Cucumis sativus L. HOM05D001930 ORTHO05D001345 6.2e-07 58.2 76 44.7
Dinv17980 Davidia involucrata HOM05D001930 ORTHO05D001345 6.2e-07 58.2 75 46.7
Cc02_g06660 Coffea canephora HOM05D001930 ORTHO05D001345 8.1e-07 57.8 59 54.2
Lsat_1_v5_gn_8_12340 Lactuca sativa HOM05D001930 ORTHO05D001345 8.1e-07 57.8 75 46.7
Cfa001331 Carpinus fangiana HOM05D001930 ORTHO05D001345 1.1e-06 57.4 79 46.8
Lj6g0015169 Lotus japonicus HOM05D001930 ORTHO05D001345 1.1e-06 57.4 77 45.5
LjContig00142g0017848 Lotus japonicus HOM05D001930 ORTHO05D001345 1.1e-06 57.4 77 45.5
PSO339G3119 Papaver somniferum HOM05D001930 ORTHO05D001345 1.1e-06 57.4 122 36.1
Ca_15267_v3 Cicer arietinum L. HOM05D001930 ORTHO05D001345 1.4e-06 57.0 78 43.6
ClCG11G006220 Citrullus lanatus HOM05D001930 ORTHO05D001345 1.4e-06 57.0 77 44.2
Migut.F00675 Erythranthe guttata HOM05D001930 ORTHO05D001345 1.4e-06 57.0 77 45.5
arahy.Tifrunner.gnm1.ann1.1VS4ZL Arachis hypogaea HOM05D001930 ORTHO05D001345 1.8e-06 56.6 77 41.6
arahy.Tifrunner.gnm1.ann1.P8UNKF Arachis hypogaea HOM05D001930 ORTHO05D001345 1.8e-06 56.6 77 41.6
Medtr3g070300 Medicago truncatula HOM05D001930 ORTHO05D001345 1.8e-06 56.6 78 43.6
PGSC0003DMG401011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 1.8e-06 56.6 75 45.3
PGSC0003DMG402011931 Solanum tuberosum HOM05D001930 ORTHO05D001345 1.8e-06 56.6 75 45.3
TPR.G2544 Trifolium pratense HOM05D001930 ORTHO05D001345 1.8e-06 56.6 78 43.6
CiPaw.01G297400 Carya illinoinensis HOM05D001930 ORTHO05D001345 2.4e-06 56.2 76 44.7
ECA238G2369 Erigeron canadensis HOM05D001930 ORTHO05D001345 2.4e-06 56.2 131 35.1
Eucgr.G03055 Eucalyptus grandis HOM05D001930 ORTHO05D001345 2.4e-06 56.2 75 44.0
Hma1.2p1_0446F.1_g154590 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 2.4e-06 56.2 75 44.0
Lj8C68G6 Lonicera japonica HOM05D001930 ORTHO05D001345 2.4e-06 56.2 99 37.4
Sp4g22360 Schrenkiella parvula HOM05D001930 ORTHO05D001345 2.4e-06 56.2 99 41.4
DCAR_028566 Daucus carota HOM05D001930 ORTHO05D001345 3.1e-06 55.8 129 34.1
Dinv23092 Davidia involucrata HOM05D001930 ORTHO05D001345 3.1e-06 55.8 75 46.7
PGR142G0208 Punica granatum HOM05D001930 ORTHO05D001345 3.1e-06 55.8 75 42.7
Hund13841 Selenicereus undatus HOM05D001930 ORTHO05D001345 3.1e-06 55.8 75 44.0
Ah.16g103400 Amaranthus hybridus HOM05D001930 ORTHO05D001345 4.0e-06 55.5 75 48.0
Ciclev10030993m.g Citrus clementina HOM05D001930 ORTHO05D001345 4.0e-06 55.5 76 44.7
Thecc.10G020700 Theobroma cacao HOM05D001930 ORTHO05D001345 4.0e-06 55.5 143 35.0
Actinidia00941 Actinidia chinensis HOM05D001930 ORTHO05D001345 5.2e-06 55.1 75 48.0
Glyma.14G060100 Glycine max HOM05D001930 ORTHO05D001345 5.2e-06 55.1 77 40.3
Nitab4.5_0000802g0030 Nicotiana tabacum HOM05D001930 ORTHO05D001345 5.2e-06 55.1 75 44.0
Oeu025644.2 Olea europaea HOM05D001930 ORTHO05D001345 5.2e-06 55.1 77 41.6
THA.LOC104810417 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 5.2e-06 55.1 76 44.7
HPP92_019257 Vanilla planifolia HOM05D001930 ORTHO05D001345 5.2e-06 55.1 124 32.3
CANSAT56G4542 Cannabis sativa HOM05D001930 ORTHO05D001345 6.8e-06 54.7 77 45.5
Hma1.2p1_0281F.1_g113000 Hydrangea macrophylla HOM05D001930 ORTHO05D001345 6.8e-06 54.7 75 42.7
MD07G1220200 Malus domestica HOM05D001930 ORTHO05D001345 6.8e-06 54.7 77 42.9
Peaxi162Scf01208g00017 Petunia axillaris HOM05D001930 ORTHO05D001345 6.8e-06 54.7 87 41.4
Psat5g126440 Pisum sativum HOM05D001930 ORTHO05D001345 6.8e-06 54.7 78 42.3
Actinidia13930 Actinidia chinensis HOM05D001930 ORTHO05D001345 8.9e-06 54.3 75 48.0
CARHR135010 Cardamine hirsuta HOM05D001930 ORTHO05D001345 8.9e-06 54.3 76 44.7
COL.COLO4_25689 Corchorus olitorius HOM05D001930 ORTHO05D001345 8.9e-06 54.3 79 44.3
MD01G1132400 Malus domestica HOM05D001930 ORTHO05D001345 8.9e-06 54.3 77 44.2
THA.LOC104810086 Tarenaya hassleriana HOM05D001930 ORTHO05D001345 8.9e-06 54.3 76 42.1


User provided reference genes

Program Settings