Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_36004 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 1.4e-267 925.6 456 100.0
SEGI_19892 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 4.8e-45 186.4 267 43.1
SEGI_39574 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 6.5e-42 176.0 267 41.2
SalBow4G2697 Salvia bowleyana HOM05D005027 ORTHO05D005978 3.0e-39 167.2 143 51.0
SEGI_39055 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 8.8e-39 165.6 267 37.8
SEGI_37641 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 2.0e-30 137.9 126 57.1
SEGI_19583 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 7.4e-30 136.0 268 30.2
SEGI_00216 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 2.2e-29 134.4 268 30.2
Atru.chr7.2090 Acer truncatum HOM05D005027 ORTHO05D005978 2.2e-26 124.4 79 64.6
MD08G1113800 Malus domestica HOM05D005027 ORTHO05D005978 3.8e-26 123.6 79 64.6
Sabra06G0186600 Salix brachista HOM05D005027 ORTHO05D005978 3.8e-26 123.6 79 64.6
Potri.006G238500 Populus trichocarpa HOM05D005027 ORTHO05D005978 6.5e-26 122.9 79 63.3
Potri.018G044100 Populus trichocarpa HOM05D005027 ORTHO05D005978 6.5e-26 122.9 79 63.3
Aqoxy7G01485 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 8.5e-26 122.5 79 62.0
Psat0s1928g0120 Pisum sativum HOM05D005027 ORTHO05D005978 8.5e-26 122.5 79 65.8
ECA248G1215 Erigeron canadensis HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 62.0
Gohir.D06G092400 Gossypium hirsutum HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 63.3
Gorai.010G106400 Gossypium raimondii HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 63.3
MD15G1093500 Malus domestica HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 63.3
Manes.16G075700 Manihot esculenta HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 63.3
Nitab4.5_0003794g0080 Nicotiana tabacum HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 62.0
Peaxi162Scf00227g00714 Petunia axillaris HOM05D005027 ORTHO05D005978 1.1e-25 122.1 79 62.0
FvH4_2g35610 Fragaria vesca HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 63.3
FAN15G3195 Fragaria x ananassa HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 63.3
FAN20G3026 Fragaria x ananassa HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 63.3
FAN27G2638 Fragaria x ananassa HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 63.3
Medtr3g109610 Medicago truncatula HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 63.3
PGSC0003DMG400002234 Solanum tuberosum HOM05D005027 ORTHO05D005978 1.5e-25 121.7 79 60.8
Cc08_g09540 Coffea canephora HOM05D005027 ORTHO05D005978 1.9e-25 121.3 79 62.0
Eucgr.C02930 Eucalyptus grandis HOM05D005027 ORTHO05D005978 1.9e-25 121.3 79 62.0
Glyma.06G085800 Glycine max HOM05D005027 ORTHO05D005978 1.9e-25 121.3 79 64.6
Nitab4.5_0001894g0040 Nicotiana tabacum HOM05D005027 ORTHO05D005978 1.9e-25 121.3 79 62.0
Ciclev10010609m.g Citrus clementina HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 63.3
COL.COLO4_20969 Corchorus olitorius HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 63.3
Sed0014536 Sechium edule HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 64.6
Solyc08g066650.3 Solanum lycopersicum HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 60.8
Sopen08g020520 Solanum pennellii HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 60.8
Thecc.09G045100 Theobroma cacao HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 64.6
TPR.G15106 Trifolium pratense HOM05D005027 ORTHO05D005978 2.5e-25 120.9 79 64.6
AUR62009284 Chenopodium quinoa HOM05D005027 ORTHO05D005978 3.2e-25 120.6 79 63.3
Gohir.A06G092800 Gossypium hirsutum HOM05D005027 ORTHO05D005978 3.2e-25 120.6 79 62.0
Rhsim02G0178400 Rhododendron simsii HOM05D005027 ORTHO05D005978 3.2e-25 120.6 79 62.0
EL10Ac2g04019 Beta vulgaris HOM05D005027 ORTHO05D005978 4.2e-25 120.2 79 62.0
Ca_15593_v3 Cicer arietinum L. HOM05D005027 ORTHO05D005978 4.2e-25 120.2 79 64.6
ClCG08G012240 Citrullus lanatus HOM05D005027 ORTHO05D005978 4.2e-25 120.2 79 62.0
Cc08_g09530 Coffea canephora HOM05D005027 ORTHO05D005978 4.2e-25 120.2 79 63.3
TAR624G0014 Trochodendron aralioides HOM05D005027 ORTHO05D005978 4.2e-25 120.2 79 60.8
ECA233G5490 Erigeron canadensis HOM05D005027 ORTHO05D005978 7.2e-25 119.4 79 59.5
HanXRQChr00c0025g0571121 Helianthus annuus HOM05D005027 ORTHO05D005978 7.2e-25 119.4 79 60.8
Lj8A581T28 Lonicera japonica HOM05D005027 ORTHO05D005978 7.2e-25 119.4 79 62.0
Medtr7g063800 Medicago truncatula HOM05D005027 ORTHO05D005978 7.2e-25 119.4 79 62.0
Phvul.009G109700 Phaseolus vulgaris HOM05D005027 ORTHO05D005978 7.2e-25 119.4 79 59.5
Aqoxy7G01483 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 9.4e-25 119.0 79 62.0
Migut.A00205 Erythranthe guttata HOM05D005027 ORTHO05D005978 9.4e-25 119.0 79 62.0
Glyma.04G084100 Glycine max HOM05D005027 ORTHO05D005978 9.4e-25 119.0 79 62.0
Lsat_1_v5_gn_1_46661 Lactuca sativa HOM05D005027 ORTHO05D005978 9.4e-25 119.0 79 59.5
CDE02G4197 Ceratophyllum demersum HOM05D005027 ORTHO05D005978 1.2e-24 118.6 79 60.8
MELO3C011142.2 Cucumis melo HOM05D005027 ORTHO05D005978 1.2e-24 118.6 79 62.0
CSS0030796 Camellia sinensis var. sinensis HOM05D005027 ORTHO05D005978 1.6e-24 118.2 79 62.0
Duzib168G0183 Durio zibethinus HOM05D005027 ORTHO05D005978 1.6e-24 118.2 79 60.8
MBI04_g45212_MAGBIO Magnolia biondii HOM05D005027 ORTHO05D005978 1.6e-24 118.2 79 59.5
Nn8g39130 Nelumbo nucifera HOM05D005027 ORTHO05D005978 1.6e-24 118.2 87 56.3
Prupe.1G448400 Prunus persica HOM05D005027 ORTHO05D005978 1.6e-24 118.2 79 62.0
RcHm_v2.0_Chr6g0306201 Rosa chinensis HOM05D005027 ORTHO05D005978 1.6e-24 118.2 79 59.5
Actinidia13335 Actinidia chinensis HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 59.5
CiPaw.08G025700 Carya illinoinensis HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 60.8
DCAR_004470 Daucus carota HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 58.2
Gohir.D07G025900 Gossypium hirsutum HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 59.5
Gorai.001G027000 Gossypium raimondii HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 59.5
HanXRQChr02g0050571 Helianthus annuus HOM05D005027 ORTHO05D005978 2.1e-24 117.9 79 58.2
CiPaw.07G204400 Carya illinoinensis HOM05D005027 ORTHO05D005978 2.7e-24 117.5 79 60.8
CsaV3_2G030870 Cucumis sativus L. HOM05D005027 ORTHO05D005978 2.7e-24 117.5 79 62.0
HPP92_022983 Vanilla planifolia HOM05D005027 ORTHO05D005978 2.7e-24 117.5 79 63.3
VMungo1309G1842 Vigna mungo HOM05D005027 ORTHO05D005978 2.7e-24 117.5 79 60.8
Aqoxy1G03410 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 3.6e-24 117.1 79 59.5
Aqoxy3G01972 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 3.6e-24 117.1 79 59.5
Aqoxy7G01484 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 3.6e-24 117.1 107 47.7
CANSAT25G1983 Cannabis sativa HOM05D005027 ORTHO05D005978 3.6e-24 117.1 79 60.8
Lsat_1_v5_gn_6_23181 Lactuca sativa HOM05D005027 ORTHO05D005978 3.6e-24 117.1 79 58.2
arahy.Tifrunner.gnm1.ann1.4KPL6Q Arachis hypogaea HOM05D005027 ORTHO05D005978 4.7e-24 116.7 79 62.0
Oeu038805.1 Olea europaea HOM05D005027 ORTHO05D005978 4.7e-24 116.7 79 60.8
vmacro11059 Vaccinium macrocarpon HOM05D005027 ORTHO05D005978 4.7e-24 116.7 79 59.5
Haze_21886 Corylus avellana HOM05D005027 ORTHO05D005978 6.1e-24 116.3 79 59.5
Gohir.A07G022500 Gossypium hirsutum HOM05D005027 ORTHO05D005978 6.1e-24 116.3 79 58.2
TWI63G0812 Tripterygium wilfordii HOM05D005027 ORTHO05D005978 6.1e-24 116.3 79 60.8
arahy.Tifrunner.gnm1.ann1.MD1Q75 Arachis hypogaea HOM05D005027 ORTHO05D005978 8.0e-24 115.9 79 62.0
TWI34G1114 Tripterygium wilfordii HOM05D005027 ORTHO05D005978 8.0e-24 115.9 79 59.5
ATR0705G159 Amborella trichopoda HOM05D005027 ORTHO05D005978 1.0e-23 115.5 79 58.2
ATR0723G015 Amborella trichopoda HOM05D005027 ORTHO05D005978 1.0e-23 115.5 79 58.2
Cfa013364 Carpinus fangiana HOM05D005027 ORTHO05D005978 1.0e-23 115.5 79 58.2
QL12p041392 Quercus lobata HOM05D005027 ORTHO05D005978 1.0e-23 115.5 79 58.2
unitig_46.g18188 Utricularia gibba HOM05D005027 ORTHO05D005978 1.0e-23 115.5 79 64.6
Oeu030720.1 Olea europaea HOM05D005027 ORTHO05D005978 1.4e-23 115.2 79 60.8
GSVIVG01035626001 Vitis vinifera HOM05D005027 ORTHO05D005978 1.4e-23 115.2 79 58.2
Eucgr.C02932 Eucalyptus grandis HOM05D005027 ORTHO05D005978 1.8e-23 114.8 79 58.2
Lj1g0019414 Lotus japonicus HOM05D005027 ORTHO05D005978 1.8e-23 114.8 79 58.2
AUR62039699 Chenopodium quinoa HOM05D005027 ORTHO05D005978 2.3e-23 114.4 79 59.5
AUR62044294 Chenopodium quinoa HOM05D005027 ORTHO05D005978 2.3e-23 114.4 79 59.5
Os01g0566500 Oryza sativa ssp. japonica HOM05D005027 ORTHO05D005978 2.3e-23 114.4 79 59.5
Os01g0746400 Oryza sativa ssp. japonica HOM05D005027 ORTHO05D005978 2.3e-23 114.4 79 60.8
Aqoxy1G03982 Aquilegia oxysepala HOM05D005027 ORTHO05D005978 3.0e-23 114.0 79 57.0
CDE08G1231 Ceratophyllum demersum HOM05D005027 ORTHO05D005978 3.0e-23 114.0 79 58.2
AT4G32810 Arabidopsis thaliana HOM05D005027 ORTHO05D005978 4.0e-23 113.6 79 60.8
PGR044G2243 Punica granatum HOM05D005027 ORTHO05D005978 4.0e-23 113.6 79 57.0
PSO210G1252 Papaver somniferum HOM05D005027 ORTHO05D005978 5.2e-23 113.2 79 58.2
Aa31sc497G20 Aethionema arabicum HOM05D005027 ORTHO05D005978 6.7e-23 112.8 79 59.5
AL7G18920 Arabidopsis lyrata HOM05D005027 ORTHO05D005978 6.7e-23 112.8 79 60.8
Sc09g0009280 Simmondsia chinensis HOM05D005027 ORTHO05D005978 6.7e-23 112.8 79 60.8
CARHR240800 Cardamine hirsuta HOM05D005027 ORTHO05D005978 8.8e-23 112.5 79 60.8
Cpa.g.c24654.3 Carica papaya HOM05D005027 ORTHO05D005978 8.8e-23 112.5 79 55.7
Thhalv10024788m.g Eutrema salsugineum HOM05D005027 ORTHO05D005978 8.8e-23 112.5 79 59.5
Lalb_Chr08g0243061 Lupinus albus HOM05D005027 ORTHO05D005978 1.2e-22 112.1 79 58.2
BcaC09g52077 Brassica carinata HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 59.5
A01p05480 Brassica napus HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 59.5
C01p06080 Brassica napus HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 59.5
BolC1t00601H Brassica oleracea HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 59.5
BraA01t00521Z Brassica rapa HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 59.5
Cpa.g.c24654.4 Carica papaya HOM05D005027 ORTHO05D005978 2.6e-22 110.9 79 57.0
AagrBONN_evm.TU.Sc2ySwM_344.4691 Anthoceros agrestis HOM05D005027 ORTHO05D005978 4.4e-22 110.2 79 58.2
Atru.chr3.767 Acer truncatum HOM05D005027 ORTHO05D005978 5.7e-22 109.8 79 57.0
Sp7g30580 Schrenkiella parvula HOM05D005027 ORTHO05D005978 9.7e-22 109.0 79 58.2
Pp3c6_21520 Physcomitrium patens HOM05D005027 ORTHO05D005978 1.3e-21 108.6 79 57.0
Zm00001eb153000 Zea mays HOM05D005027 ORTHO05D005978 1.3e-21 108.6 79 58.2
Carub.0007s0768 Capsella rubella HOM05D005027 ORTHO05D005978 4.8e-21 106.7 79 58.2
SMO147G0156 Selaginella moellendorffii HOM05D005027 ORTHO05D005978 1.1e-20 105.5 79 55.7
Ciclev10008050m.g Citrus clementina HOM05D005027 ORTHO05D005978 1.8e-20 104.8 81 51.9
Ah.16g105780 Amaranthus hybridus HOM05D005027 ORTHO05D005978 1.2e-19 102.1 79 58.2
SGA_v2.0_scaffold103G29990 Striga asiatica HOM05D005027 ORTHO05D005978 1.4e-12 78.6 65 52.3
CAN.G552.8 Capsicum annuum HOM05D005027 ORTHO05D005978 9.1e-12 75.9 44 65.9
Cre02.g073900 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 6.6e-10 69.7 78 39.7
Cre02.g073950 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 6.6e-10 69.7 78 39.7
CAN.G400.1 Capsicum annuum HOM05D005027 ORTHO05D005978 1.1e-09 68.9 59 47.5
PRCOL_00003714 Prasinoderma coloniale HOM05D005027 ORTHO05D005978 1.5e-09 68.6 76 40.8
Cre08.g365851 Chlamydomonas reinhardtii HOM05D005027 ORTHO05D005978 7.2e-09 66.2 79 39.2
SEGI_33998 Sequoiadendron giganteum HOM05D005027 ORTHO05D005978 2.6e-06 57.8 54 44.4
HanXRQChr02g0059541 Helianthus annuus HOM05D000433 ORTHO05D000443 4.4e-06 57.0 81 35.8


User provided reference genes

Program Settings