Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_34710 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 5.0e-207 724.2 354 100.0
Nn4g22021 Nelumbo nucifera HOM05D003971 ORTHO05D004762 7.3e-142 507.7 315 76.2
TAR622G0096 Trochodendron aralioides HOM05D003971 ORTHO05D004762 3.1e-140 502.3 315 74.3
Lsat_1_v5_gn_5_10121 Lactuca sativa HOM05D003971 ORTHO05D004762 7.1e-137 491.1 322 69.9
Atru.chr6.1916 Acer truncatum HOM05D003971 ORTHO05D004762 1.0e-135 487.3 315 72.1
CSS0040569 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 3.0e-135 485.7 315 71.4
ECA246G0638 Erigeron canadensis HOM05D003971 ORTHO05D004762 8.7e-135 484.2 317 70.3
MSTRG.22849 Avicennia marina HOM05D003971 ORTHO05D004762 1.9e-134 483.0 315 70.5
Potri.012G108100 Populus trichocarpa HOM05D003971 ORTHO05D004762 2.5e-134 482.6 315 71.1
Lj1g0015188 Lotus japonicus HOM05D003971 ORTHO05D004762 4.3e-134 481.9 316 71.2
Ciclev10031176m.g Citrus clementina HOM05D003971 ORTHO05D004762 7.3e-134 481.1 339 66.7
PSO384G2792 Papaver somniferum HOM05D003971 ORTHO05D004762 7.3e-134 481.1 315 70.5
Hund02509 Selenicereus undatus HOM05D003971 ORTHO05D004762 9.6e-134 480.7 314 71.0
Cpa.g.sc13.168 Carica papaya HOM05D003971 ORTHO05D004762 2.8e-133 479.2 315 70.2
Cfa018707 Carpinus fangiana HOM05D003971 ORTHO05D004762 2.8e-133 479.2 315 71.4
HanXRQChr05g0155401 Helianthus annuus HOM05D003971 ORTHO05D004762 2.8e-133 479.2 317 69.7
Cc04_g05880 Coffea canephora HOM05D003971 ORTHO05D004762 3.6e-133 478.8 343 66.5
AUR62009537 Chenopodium quinoa HOM05D003971 ORTHO05D004762 4.7e-133 478.4 314 70.4
AUR62041701 Chenopodium quinoa HOM05D003971 ORTHO05D004762 6.2e-133 478.0 314 70.4
Migut.I00618 Erythranthe guttata HOM05D003971 ORTHO05D004762 1.4e-132 476.9 350 64.3
Sabra12G0079300 Salix brachista HOM05D003971 ORTHO05D004762 1.4e-132 476.9 316 70.6
Aqoxy1G00170 Aquilegia oxysepala HOM05D003971 ORTHO05D004762 1.8e-132 476.5 315 72.4
vmacro19182 Vaccinium macrocarpon HOM05D003971 ORTHO05D004762 3.1e-132 475.7 316 69.9
AUR62041703 Chenopodium quinoa HOM05D003971 ORTHO05D004762 4.0e-132 475.3 314 70.1
GSVIVG01008647001 Vitis vinifera HOM05D003971 ORTHO05D004762 4.0e-132 475.3 315 70.5
MBI07_g41261_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 5.2e-132 474.9 281 77.6
CiPaw.11G001000 Carya illinoinensis HOM05D003971 ORTHO05D004762 6.9e-132 474.6 314 70.4
PSO339G4968 Papaver somniferum HOM05D003971 ORTHO05D004762 6.9e-132 474.6 315 70.5
TWI39G0398 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 1.2e-131 473.8 315 70.8
Duzib084G0567 Durio zibethinus HOM05D003971 ORTHO05D004762 1.5e-131 473.4 314 69.4
Sopen12g021240 Solanum pennellii HOM05D003971 ORTHO05D004762 1.5e-131 473.4 347 64.6
Thecc.03G140300 Theobroma cacao HOM05D003971 ORTHO05D004762 2.0e-131 473.0 342 66.4
Peaxi162Scf01168g00013 Petunia axillaris HOM05D003971 ORTHO05D004762 3.4e-131 472.2 314 68.5
Solyc12g042200.2 Solanum lycopersicum HOM05D003971 ORTHO05D004762 3.4e-131 472.2 347 64.0
Lj5C87G6 Lonicera japonica HOM05D003971 ORTHO05D004762 9.9e-131 470.7 313 70.0
Prupe.5G142100 Prunus persica HOM05D003971 ORTHO05D004762 9.9e-131 470.7 314 70.1
Sed0008211 Sechium edule HOM05D003971 ORTHO05D004762 1.7e-130 469.9 298 72.5
ATR0582G269 Amborella trichopoda HOM05D003971 ORTHO05D004762 2.9e-130 469.2 315 68.6
Gohir.D03G110400 Gossypium hirsutum HOM05D003971 ORTHO05D004762 2.9e-130 469.2 336 64.9
Actinidia18301 Actinidia chinensis HOM05D003971 ORTHO05D004762 4.9e-130 468.4 315 69.5
Lalb_Chr11g0069181 Lupinus albus HOM05D003971 ORTHO05D004762 4.2e-129 465.3 316 69.0
Gohir.A03G056200 Gossypium hirsutum HOM05D003971 ORTHO05D004762 5.4e-129 464.9 336 64.6
MD06G1130900 Malus domestica HOM05D003971 ORTHO05D004762 5.4e-129 464.9 314 69.7
ClCG03G004040 Citrullus lanatus HOM05D003971 ORTHO05D004762 9.3e-129 464.2 301 72.1
Nitab4.5_0002584g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 9.3e-129 464.2 314 67.5
Phvul.009G161300 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 1.2e-128 463.8 317 69.1
EL10Ac5g11286 Beta vulgaris HOM05D003971 ORTHO05D004762 1.6e-128 463.4 314 67.8
Glyma.04G201300 Glycine max HOM05D003971 ORTHO05D004762 1.6e-128 463.4 337 66.8
Ca_10878_v3 Cicer arietinum L. HOM05D003971 ORTHO05D004762 3.5e-128 462.2 314 68.5
MD14G1147500 Malus domestica HOM05D003971 ORTHO05D004762 4.6e-128 461.8 314 69.4
PGR083G2644 Punica granatum HOM05D003971 ORTHO05D004762 6.0e-128 461.5 315 67.3
ClCG06G018370 Citrullus lanatus HOM05D003971 ORTHO05D004762 7.8e-128 461.1 318 67.6
Glyma.06G163900 Glycine max HOM05D003971 ORTHO05D004762 1.0e-127 460.7 337 66.5
MBI03_g13042_MAGBIO Magnolia biondii HOM05D003971 ORTHO05D004762 1.0e-127 460.7 314 66.9
Nitab4.5_0008403g0010 Nicotiana tabacum HOM05D003971 ORTHO05D004762 1.7e-127 459.9 314 66.9
Sabra15G0126400 Salix brachista HOM05D003971 ORTHO05D004762 1.7e-127 459.9 315 68.3
CsaV3_1G009920 Cucumis sativus L. HOM05D003971 ORTHO05D004762 3.0e-127 459.1 298 71.5
VMungo1309G0830 Vigna mungo HOM05D003971 ORTHO05D004762 3.9e-127 458.8 300 71.0
Hund10040 Selenicereus undatus HOM05D003971 ORTHO05D004762 5.1e-127 458.4 314 68.5
MELO3C002386.2 Cucumis melo HOM05D003971 ORTHO05D004762 6.6e-127 458.0 298 71.5
TWI23G0486 Tripterygium wilfordii HOM05D003971 ORTHO05D004762 6.6e-127 458.0 307 69.1
FAN04G0277 Fragaria x ananassa HOM05D003971 ORTHO05D004762 1.9e-126 456.4 339 64.0
FvH4_5g09480 Fragaria vesca HOM05D003971 ORTHO05D004762 2.5e-126 456.1 339 64.0
CANSAT56G1634 Cannabis sativa HOM05D003971 ORTHO05D004762 3.3e-126 455.7 339 65.2
arahy.Tifrunner.gnm1.ann1.86AC6C Arachis hypogaea HOM05D003971 ORTHO05D004762 4.3e-126 455.3 315 67.9
arahy.Tifrunner.gnm1.ann1.9UH1TF Arachis hypogaea HOM05D003971 ORTHO05D004762 5.6e-126 454.9 318 67.3
FAN18G1571 Fragaria x ananassa HOM05D003971 ORTHO05D004762 5.6e-126 454.9 339 64.3
Lj9C486T6 Lonicera japonica HOM05D003971 ORTHO05D004762 5.6e-126 454.9 314 66.9
DCAR_021401 Daucus carota HOM05D003971 ORTHO05D004762 9.6e-126 454.1 315 66.0
FAN13G1049 Fragaria x ananassa HOM05D003971 ORTHO05D004762 9.6e-126 454.1 339 63.7
Medtr3g098600 Medicago truncatula HOM05D003971 ORTHO05D004762 9.6e-126 454.1 315 67.3
Oeu046606.1 Olea europaea HOM05D003971 ORTHO05D004762 1.3e-125 453.8 315 67.0
Psat5g055040 Pisum sativum HOM05D003971 ORTHO05D004762 1.3e-125 453.8 316 66.8
QL10p000509 Quercus lobata HOM05D003971 ORTHO05D004762 2.1e-125 453.0 281 73.0
Gohir.D07G051000 Gossypium hirsutum HOM05D003971 ORTHO05D004762 2.8e-125 452.6 315 67.3
Sed0022051 Sechium edule HOM05D003971 ORTHO05D004762 3.6e-125 452.2 299 68.9
Gorai.003G116700 Gossypium raimondii HOM05D003971 ORTHO05D004762 4.8e-125 451.8 327 63.9
Eucgr.K00065 Eucalyptus grandis HOM05D003971 ORTHO05D004762 2.4e-124 449.5 317 66.6
Gorai.001G054100 Gossypium raimondii HOM05D003971 ORTHO05D004762 2.4e-124 449.5 315 66.7
Gohir.A07G046700 Gossypium hirsutum HOM05D003971 ORTHO05D004762 4.0e-124 448.7 315 65.7
THA.LOC104825039 Tarenaya hassleriana HOM05D003971 ORTHO05D004762 1.2e-123 447.2 315 65.7
RcHm_v2.0_Chr7g0188721 Rosa chinensis HOM05D003971 ORTHO05D004762 1.3e-122 443.7 318 65.4
Rhsim08G0197300 Rhododendron simsii HOM05D003971 ORTHO05D004762 4.9e-122 441.8 282 71.6
A03p16430 Brassica napus HOM05D003971 ORTHO05D004762 6.4e-122 441.4 339 61.9
BraA03t10933Z Brassica rapa HOM05D003971 ORTHO05D004762 6.4e-122 441.4 339 61.9
AT5G50970 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 8.4e-122 441.0 314 65.3
C03p19320 Brassica napus HOM05D003971 ORTHO05D004762 1.4e-121 440.3 313 65.2
BolC3t14318H Brassica oleracea HOM05D003971 ORTHO05D004762 1.9e-121 439.9 313 65.2
AL8G25160 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 2.4e-121 439.5 314 65.0
CsaV3_1G000070 Cucumis sativus L. HOM05D003971 ORTHO05D004762 2.4e-121 439.5 315 64.8
FAN08G0744 Fragaria x ananassa HOM05D003971 ORTHO05D004762 4.2e-121 438.7 376 57.7
MELO3C026159.2 Cucumis melo HOM05D003971 ORTHO05D004762 9.3e-121 437.6 342 62.0
Thhalv10013209m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 1.2e-120 437.2 314 64.6
SEGI_10226 Sequoiadendron giganteum HOM05D003971 ORTHO05D004762 1.2e-120 437.2 277 71.8
Sp6g13140 Schrenkiella parvula HOM05D003971 ORTHO05D004762 1.6e-120 436.8 314 65.3
CARHR257220 Cardamine hirsuta HOM05D003971 ORTHO05D004762 2.7e-120 436.0 318 65.1
Carub.0008s1099 Capsella rubella HOM05D003971 ORTHO05D004762 3.5e-120 435.6 314 65.0
PGSC0003DMG400014242 Solanum tuberosum HOM05D003971 ORTHO05D004762 1.0e-119 434.1 315 63.8
HPP92_028338 Vanilla planifolia HOM05D003971 ORTHO05D004762 1.3e-119 433.7 314 65.9
Sc22g0003380 Simmondsia chinensis HOM05D003971 ORTHO05D004762 3.0e-119 432.6 339 59.9
DCAR_016341 Daucus carota HOM05D003971 ORTHO05D004762 6.7e-119 431.4 313 64.5
Peaxi162Scf00314g00638 Petunia axillaris HOM05D003971 ORTHO05D004762 1.9e-118 429.9 315 64.8
Sopen03g037130 Solanum pennellii HOM05D003971 ORTHO05D004762 4.8e-117 425.2 315 62.5
Zm00001eb210690 Zea mays HOM05D003971 ORTHO05D004762 4.0e-116 422.2 312 62.8
Lsat_1_v5_gn_4_84501 Lactuca sativa HOM05D003971 ORTHO05D004762 1.5e-115 420.2 317 61.5
Zm00001eb064630 Zea mays HOM05D003971 ORTHO05D004762 2.2e-114 416.4 312 62.2
Manes.06G126801 Manihot esculenta HOM05D003971 ORTHO05D004762 2.9e-114 416.0 284 68.3
Lj4g0027413 Lotus japonicus HOM05D003971 ORTHO05D004762 1.4e-113 413.7 316 60.4
VMungo0251G1950 Vigna mungo HOM05D000512 ORTHO05D000861 2.1e-112 409.8 315 61.3
unitig_21.g20335 Utricularia gibba HOM05D003971 ORTHO05D004762 7.9e-112 407.9 316 61.7
BcaC01g06062 Brassica carinata HOM05D003971 ORTHO05D004762 1.8e-111 406.8 313 61.3
Medtr8g100180 Medicago truncatula HOM05D003971 ORTHO05D004762 1.1e-110 404.1 314 59.2
Phvul.002G281600 Phaseolus vulgaris HOM05D003971 ORTHO05D004762 2.5e-110 402.9 342 56.1
TPR.G12938 Trifolium pratense HOM05D003971 ORTHO05D004762 2.5e-110 402.9 315 58.1
Haze_07098 Corylus avellana HOM05D003971 ORTHO05D004762 3.3e-110 402.5 369 56.1
SHI34430 Sapria himalayana HOM05D003971 ORTHO05D004762 7.4e-110 401.4 339 57.2
Aa31LG3G7450 Aethionema arabicum HOM05D003971 ORTHO05D004762 6.2e-109 398.3 266 67.3
Mapoly0008s0248 Marchantia polymorpha HOM05D003971 ORTHO05D004762 2.2e-106 389.8 305 58.4
Ah.11g046910 Amaranthus hybridus HOM05D001469 ORTHO05D001648 7.9e-104 381.3 253 66.4
HanXRQChr17g0565911 Helianthus annuus HOM05D003971 ORTHO05D004762 2.8e-101 372.9 275 62.5
COL.COLO4_37254 Corchorus olitorius HOM05D003971 ORTHO05D004762 8.2e-101 371.3 245 68.2
HPP92_011657 Vanilla planifolia HOM05D003971 ORTHO05D004762 1.8e-100 370.2 228 73.2
AagrBONN_evm.TU.Sc2ySwM_117.1595 Anthoceros agrestis HOM05D003971 ORTHO05D004762 2.4e-100 369.8 315 54.0
Pp3c11_18210 Physcomitrium patens HOM05D003971 ORTHO05D004762 2.4e-100 369.8 317 56.5
AL6G31450 Arabidopsis lyrata HOM05D003971 ORTHO05D004762 9.0e-100 367.9 322 55.3
Carub.0006s1829 Capsella rubella HOM05D003971 ORTHO05D004762 3.4e-99 365.9 322 54.3
AT5G19920 Arabidopsis thaliana HOM05D003971 ORTHO05D004762 5.0e-98 362.1 322 53.4
BcaC04g19398 Brassica carinata HOM05D003971 ORTHO05D004762 5.0e-98 362.1 315 53.7
Sp6g24460 Schrenkiella parvula HOM05D003971 ORTHO05D004762 4.2e-97 359.0 315 53.7
C09p56130 Brassica napus HOM05D003971 ORTHO05D004762 1.2e-96 357.5 316 53.5
BolC9t58480H Brassica oleracea HOM05D003971 ORTHO05D004762 1.2e-96 357.5 316 53.5
Aa31LG10G8100 Aethionema arabicum HOM05D003971 ORTHO05D004762 2.1e-96 356.7 351 50.4
BcaB08g36556 Brassica carinata HOM05D003971 ORTHO05D004762 2.1e-96 356.7 343 50.4
A10p19810 Brassica napus HOM05D003971 ORTHO05D004762 2.7e-96 356.3 316 53.2
BraA10t44057Z Brassica rapa HOM05D003971 ORTHO05D004762 2.7e-96 356.3 316 53.2
Cc03_g15560 Coffea canephora HOM05D003971 ORTHO05D004762 2.7e-96 356.3 282 61.3
Thhalv10013007m.g Eutrema salsugineum HOM05D003971 ORTHO05D004762 3.6e-96 355.9 351 50.4
CARHR192940 Cardamine hirsuta HOM05D003971 ORTHO05D004762 1.0e-95 354.4 299 54.5
A02p05920 Brassica napus HOM05D003971 ORTHO05D004762 6.5e-90 335.1 300 53.3
BraA02t05544Z Brassica rapa HOM05D003971 ORTHO05D004762 6.5e-90 335.1 300 53.3
TPR.G25960 Trifolium pratense HOM05D003971 ORTHO05D004762 8.5e-90 334.7 316 53.8
BNapus_Darmor_BZH_scaffold_38p01950 Brassica napus HOM05D003971 ORTHO05D004762 4.7e-88 328.9 301 52.5
BolC2t06996H Brassica oleracea HOM05D003971 ORTHO05D004762 4.7e-88 328.9 301 52.5
Nitab4.5_0000976g0020 Nicotiana tabacum HOM05D003971 ORTHO05D004762 6.1e-88 328.6 238 64.7
Eucgr.L01129 Eucalyptus grandis HOM05D003971 ORTHO05D004762 6.7e-87 325.1 208 71.6
Eucgr.L01124 Eucalyptus grandis HOM05D003971 ORTHO05D004762 1.7e-85 320.5 208 71.6
Potri.015G106300 Populus trichocarpa HOM05D003971 ORTHO05D004762 5.0e-82 308.9 211 67.3
Actinidia25522 Actinidia chinensis HOM05D000512 ORTHO05D004762 8.5e-82 308.1 202 70.8
CBR_g3752 Chara braunii HOM05D003971 ORTHO05D004762 2.5e-81 306.6 297 51.2
Sc04g0000200 Simmondsia chinensis HOM05D003971 ORTHO05D004762 3.5e-75 286.2 207 63.8
RcHm_v2.0_Chr1g0373351 Rosa chinensis HOM05D003971 ORTHO05D004762 1.6e-72 277.3 220 59.5
Solyc03g118220.3 Solanum lycopersicum HOM05D003971 ORTHO05D004762 2.8e-69 266.5 230 56.5
CDE02G0369 Ceratophyllum demersum HOM05D003971 ORTHO05D004762 3.4e-54 216.5 131 74.8
Lalb_Chr12g0202501 Lupinus albus HOM05D003971 ORTHO05D004762 8.0e-48 195.3 163 57.7
SGA_v2.0_scaffold74G24722 Striga asiatica HOM05D003971 ORTHO05D004762 1.2e-43 181.4 114 73.7
SalBow7G2108 Salvia bowleyana HOM05D003971 ORTHO05D004762 2.0e-43 180.6 130 64.6
SMO334G0050 Selaginella moellendorffii HOM05D003971 ORTHO05D004762 1.8e-39 167.5 250 38.4
Solyc03g118210.3 Solanum lycopersicum HOM05D003971 ORTHO05D004762 4.4e-38 162.9 104 70.2
Oeu012846.1 Olea europaea HOM05D003971 ORTHO05D004433 1.3e-37 161.4 137 56.9
CSS0006697 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 2.8e-32 143.7 83 81.9
CSS0040784 Camellia sinensis var. sinensis HOM05D003971 ORTHO05D004762 4.9e-29 132.9 82 73.2
Dinv13722 Davidia involucrata HOM05D000475 ORTHO05D000343 7.8e-27 125.6 71 81.7
Dinv23224 Davidia involucrata HOM05D000475 ORTHO05D000343 5.6e-25 119.4 65 87.7
Oeu061253.1 Olea europaea HOM05D003971 ORTHO05D004762 8.1e-24 115.5 93 59.1
Os08g0511500 Oryza sativa ssp. japonica HOM05D003971 ORTHO05D004762 1.1e-23 115.2 93 58.1
HPP92_011707 Vanilla planifolia HOM05D003971 ORTHO05D004762 8.9e-23 112.1 85 60.0
Hma1.2p1_0664F.1_g199006 Hydrangea macrophylla HOM05D003971 ORTHO05D004762 1.7e-21 107.8 83 59.0
Lalb_Chr12g0202511 Lupinus albus HOM05D003971 ORTHO05D004762 1.5e-14 84.7 83 45.8
Dinv13723 Davidia involucrata HOM05D003971 ORTHO05D004762 2.4e-12 77.4 60 53.3


User provided reference genes

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