Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33737 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 8.8e-170 600.1 289 100.0
SEGI_06613 Sequoiadendron giganteum HOM05D004406 ORTHO05D005660 1.6e-155 552.7 270 97.0
ATR0739G109 Amborella trichopoda HOM05D004406 ORTHO05D005660 1.4e-82 310.5 270 55.6
Mapoly0116s0013 Marchantia polymorpha HOM05D004406 ORTHO05D005660 1.2e-81 307.4 274 56.2
Gohir.D11G203200 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.7e-75 285.8 272 52.6
vmacro15158 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 6.3e-75 285.0 272 51.5
Dinv26661 Davidia involucrata HOM05D004406 ORTHO05D005660 8.2e-75 284.6 276 52.5
COL.COLO4_35795 Corchorus olitorius HOM05D004406 ORTHO05D005660 1.4e-74 283.9 272 52.6
Pp3c22_7820 Physcomitrium patens HOM05D004406 ORTHO05D005660 1.4e-74 283.9 274 53.3
Gorai.007G217900 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.8e-74 283.5 272 52.2
Oeu002771.1 Olea europaea HOM05D004406 ORTHO05D005660 1.8e-74 283.5 272 53.3
Thecc.01G135800 Theobroma cacao HOM05D004406 ORTHO05D005660 4.1e-74 282.3 272 52.2
Prupe.4G148400 Prunus persica HOM05D004406 ORTHO05D005660 5.3e-74 282.0 269 53.2
MSTRG.6706 Avicennia marina HOM05D004406 ORTHO05D005660 7.0e-74 281.6 272 51.1
CDE06G1959 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 7.0e-74 281.6 270 53.0
vmacro12019 Vaccinium macrocarpon HOM05D004406 ORTHO05D005660 7.0e-74 281.6 272 51.1
Gohir.A11G220400 Gossypium hirsutum HOM05D004406 ORTHO05D005660 9.1e-74 281.2 272 51.8
Ca_03669_v3 Cicer arietinum L. HOM05D004406 ORTHO05D005660 1.5e-73 280.4 273 53.1
Cc05_g10180 Coffea canephora HOM05D004406 ORTHO05D005660 1.5e-73 280.4 272 50.4
CSS0020755 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.0e-73 280.0 272 52.2
FAN16G0888 Fragaria x ananassa HOM05D004406 ORTHO05D005660 2.6e-73 279.6 272 51.1
FvH4_3g16570 Fragaria vesca HOM05D004406 ORTHO05D005660 4.5e-73 278.9 272 51.1
FAN11G0596 Fragaria x ananassa HOM05D004406 ORTHO05D005660 4.5e-73 278.9 272 51.1
arahy.Tifrunner.gnm1.ann1.L0EV17 Arachis hypogaea HOM05D004406 ORTHO05D005660 7.7e-73 278.1 272 52.6
CDE04G2964 Ceratophyllum demersum HOM05D004406 ORTHO05D005660 7.7e-73 278.1 270 52.6
Lj1C808G13 Lonicera japonica HOM05D004406 ORTHO05D005660 1.0e-72 277.7 272 51.5
Manes.10G061001 Manihot esculenta HOM05D004406 ORTHO05D005660 1.7e-72 276.9 272 50.7
GSVIVG01009332001 Vitis vinifera HOM05D004406 ORTHO05D005660 2.2e-72 276.6 272 50.4
QL04p076605 Quercus lobata HOM05D004406 ORTHO05D005660 2.9e-72 276.2 272 53.7
Nn5g30617 Nelumbo nucifera HOM05D004406 ORTHO05D005660 3.8e-72 275.8 272 52.2
FAN25G0744 Fragaria x ananassa HOM05D004406 ORTHO05D005660 5.0e-72 275.4 272 50.7
MD10G1195500 Malus domestica HOM05D004406 ORTHO05D005660 5.0e-72 275.4 266 51.5
FAN21G0297 Fragaria x ananassa HOM05D004406 ORTHO05D005660 8.5e-72 274.6 272 50.4
MD05G1209100 Malus domestica HOM05D004406 ORTHO05D005660 1.1e-71 274.2 268 51.1
Medtr2g069330 Medicago truncatula HOM05D004406 ORTHO05D005660 1.4e-71 273.9 273 50.9
Potri.001G394300 Populus trichocarpa HOM05D004406 ORTHO05D005660 1.4e-71 273.9 272 50.7
PSO170G0587 Papaver somniferum HOM05D004406 ORTHO05D005660 1.9e-71 273.5 270 51.5
Peaxi162Scf00003g04835 Petunia axillaris HOM05D004406 ORTHO05D005660 1.9e-71 273.5 272 50.7
RcHm_v2.0_Chr5g0027601 Rosa chinensis HOM05D004406 ORTHO05D005660 1.9e-71 273.5 272 50.7
Actinidia35181 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.2e-71 272.7 272 50.7
TWI38G2065 Tripterygium wilfordii HOM05D004406 ORTHO05D005660 4.2e-71 272.3 266 51.5
Atru.chr9.1518 Acer truncatum HOM05D004406 ORTHO05D005660 5.5e-71 271.9 272 50.0
PSO528G0243 Papaver somniferum HOM05D004406 ORTHO05D005660 5.5e-71 271.9 266 51.9
Sabra16G0258600 Salix brachista HOM05D004406 ORTHO05D005660 5.5e-71 271.9 273 50.5
Actinidia18837 Actinidia chinensis HOM05D004406 ORTHO05D005660 9.4e-71 271.2 272 50.4
PGSC0003DMG400008359 Solanum tuberosum HOM05D004406 ORTHO05D005660 9.4e-71 271.2 272 50.4
TAR628G1650 Trochodendron aralioides HOM05D004406 ORTHO05D005660 1.2e-70 270.8 266 50.8
Solyc10g078480.2 Solanum lycopersicum HOM05D004406 ORTHO05D005660 2.1e-70 270.0 272 50.0
Sopen10g029140 Solanum pennellii HOM05D004406 ORTHO05D005660 2.1e-70 270.0 272 50.0
TAR376G0792 Trochodendron aralioides HOM05D004406 ORTHO05D005660 2.1e-70 270.0 266 51.5
Cfa019935 Carpinus fangiana HOM05D004406 ORTHO05D005660 2.7e-70 269.6 272 50.4
Dinv13306 Davidia involucrata HOM05D004406 ORTHO05D005660 3.6e-70 269.2 275 51.3
SalBow5G1666 Salvia bowleyana HOM05D004406 ORTHO05D005660 3.6e-70 269.2 272 51.1
CiPaw.01G106500 Carya illinoinensis HOM05D004406 ORTHO05D005660 4.7e-70 268.9 272 50.7
Sc03g0007790 Simmondsia chinensis HOM05D004406 ORTHO05D005660 4.7e-70 268.9 272 50.0
PGR004G1399 Punica granatum HOM05D004406 ORTHO05D005660 6.1e-70 268.5 272 51.5
Aqoxy6G02573 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 1.0e-69 267.7 272 51.1
Psat1g012120 Pisum sativum HOM05D004406 ORTHO05D005660 1.4e-69 267.3 272 50.4
Glyma.15G256700 Glycine max HOM05D004406 ORTHO05D005660 1.8e-69 266.9 272 49.6
Hund02309 Selenicereus undatus HOM05D004406 ORTHO05D005660 3.0e-69 266.2 272 49.3
EL10Ac9g22869 Beta vulgaris HOM05D004406 ORTHO05D005660 3.9e-69 265.8 272 48.9
THA.LOC104808122 Tarenaya hassleriana HOM05D004406 ORTHO05D005660 3.9e-69 265.8 271 50.2
VMungo1080G1685 Vigna mungo HOM05D004406 ORTHO05D005660 5.2e-69 265.4 272 50.7
Phvul.005G057900 Phaseolus vulgaris HOM05D004406 ORTHO05D005660 6.7e-69 265.0 272 50.4
SMO353G0172 Selaginella moellendorffii HOM05D004406 ORTHO05D005660 8.8e-69 264.6 211 61.1
Lj3g0010925 Lotus japonicus HOM05D004406 ORTHO05D005660 1.1e-68 264.2 269 50.2
Nitab4.5_0000812g0150 Nicotiana tabacum HOM05D004406 ORTHO05D005660 3.3e-68 262.7 188 62.8
PSO017G0585 Papaver somniferum HOM05D004406 ORTHO05D005660 3.3e-68 262.7 276 48.6
Aqoxy6G03019 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 5.7e-68 261.9 272 50.4
arahy.Tifrunner.gnm1.ann1.BTSV3Q Arachis hypogaea HOM05D004406 ORTHO05D005660 5.7e-68 261.9 272 50.7
Haze_15516 Corylus avellana HOM05D004406 ORTHO05D005660 5.7e-68 261.9 271 49.8
Migut.M00660 Erythranthe guttata HOM05D004406 ORTHO05D005660 5.7e-68 261.9 272 50.7
Oeu044427.1 Olea europaea HOM05D004406 ORTHO05D005660 9.7e-68 261.2 272 50.4
HanXRQChr11g0329941 Helianthus annuus HOM05D004406 ORTHO05D005660 1.7e-67 260.4 272 49.3
CANSAT25G0941 Cannabis sativa HOM05D004406 ORTHO05D005660 2.2e-67 260.0 272 48.5
Ciclev10001005m.g Citrus clementina HOM05D004406 ORTHO05D005660 2.2e-67 260.0 271 50.2
Sp1g14730 Schrenkiella parvula HOM05D004406 ORTHO05D005660 2.2e-67 260.0 271 48.7
CAN.G960.55 Capsicum annuum HOM05D004406 ORTHO05D005660 2.8e-67 259.6 272 49.6
Eucgr.F01412 Eucalyptus grandis HOM05D004406 ORTHO05D005660 3.7e-67 259.2 269 50.9
C05p14870 Brassica napus HOM05D004406 ORTHO05D005660 4.8e-67 258.8 271 49.1
Lalb_Chr25g0284911 Lupinus albus HOM05D004406 ORTHO05D005660 6.3e-67 258.5 272 49.6
Thhalv10007520m.g Eutrema salsugineum HOM05D004406 ORTHO05D005660 8.2e-67 258.1 271 49.1
A06p12560 Brassica napus HOM05D004406 ORTHO05D005660 1.1e-66 257.7 271 48.7
C08p44420 Brassica napus HOM05D004406 ORTHO05D005660 3.1e-66 256.1 271 48.7
AT1G16570 Arabidopsis thaliana HOM05D004406 ORTHO05D005660 5.3e-66 255.4 271 47.6
BraA06t24419Z Brassica rapa HOM05D004406 ORTHO05D005660 9.1e-66 254.6 271 48.3
CARHR017050 Cardamine hirsuta HOM05D004406 ORTHO05D005660 9.1e-66 254.6 271 47.6
DCAR_013800 Daucus carota HOM05D004406 ORTHO05D005660 1.2e-65 254.2 281 49.1
AL1G28740 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 1.6e-65 253.8 271 46.9
BcaC05g25520 Brassica carinata HOM05D004406 ORTHO05D005660 1.6e-65 253.8 271 48.0
Carub.0001s1633 Capsella rubella HOM05D004406 ORTHO05D005660 1.6e-65 253.8 271 48.0
Aqoxy113s002 Aquilegia oxysepala HOM05D004406 ORTHO05D005660 2.0e-65 253.4 251 52.2
BolC5t30202H Brassica oleracea HOM05D004406 ORTHO05D005660 2.0e-65 253.4 271 48.0
Cpa.g.sc132.61 Carica papaya HOM05D004406 ORTHO05D005660 2.6e-65 253.1 272 49.3
AUR62017618 Chenopodium quinoa HOM05D004406 ORTHO05D005660 2.6e-65 253.1 269 48.0
A09p60830 Brassica napus HOM05D004406 ORTHO05D005660 3.5e-65 252.7 271 48.0
BraA09t41456Z Brassica rapa HOM05D004406 ORTHO05D005660 3.5e-65 252.7 271 48.0
Os03g0180700 Oryza sativa ssp. japonica HOM05D004406 ORTHO05D005660 4.5e-65 252.3 270 48.5
Nitab4.5_0006279g0030 Nicotiana tabacum HOM05D004406 ORTHO05D005660 5.9e-65 251.9 272 48.5
BolC8t51983H Brassica oleracea HOM05D004406 ORTHO05D005660 7.7e-65 251.5 271 47.6
ECA236G4460 Erigeron canadensis HOM05D004406 ORTHO05D005660 1.3e-64 250.8 272 48.2
Aa31LG7G1110 Aethionema arabicum HOM05D004406 ORTHO05D005660 1.7e-64 250.4 271 46.5
Zm00001eb401770 Zea mays HOM05D004406 ORTHO05D005660 8.5e-64 248.1 270 45.6
Sed0020103 Sechium edule HOM05D004406 ORTHO05D005660 2.5e-63 246.5 272 47.1
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 2.1e-62 243.4 175 59.4
Duzib187G2008 Durio zibethinus HOM05D004406 ORTHO05D005660 1.8e-61 240.4 168 64.9
Glyma.08G170200 Glycine max HOM05D004406 ORTHO05D005660 6.8e-61 238.4 253 49.4
HPP92_025666 Vanilla planifolia HOM05D004406 ORTHO05D005660 1.2e-60 237.7 270 46.7
unitig_62.g23080 Utricularia gibba HOM05D004406 ORTHO05D005660 2.0e-60 236.9 272 44.5
MELO3C022781.2 Cucumis melo HOM05D004406 ORTHO05D005660 7.5e-60 235.0 273 46.5
CBR_g37525 Chara braunii HOM05D004406 ORTHO05D005660 1.3e-59 234.2 308 41.6
ClCG03G009170 Citrullus lanatus HOM05D004406 ORTHO05D005660 8.3e-59 231.5 273 45.8
CsaV3_5G023450 Cucumis sativus L. HOM05D004406 ORTHO05D005660 1.4e-58 230.7 272 45.2
SalBow5G0012 Salvia bowleyana HOM05D004406 ORTHO05D005660 2.7e-54 216.5 148 64.2
SGA_v2.0_scaffold73G24357 Striga asiatica HOM05D004406 ORTHO05D005660 8.0e-54 214.9 167 58.7
TPR.G9754 Trifolium pratense HOM05D004406 ORTHO05D005660 1.0e-53 214.5 209 53.1
FAN21G3885 Fragaria x ananassa HOM05D004406 ORTHO05D005660 7.5e-52 208.4 206 50.5
Gohir.A09G004700 Gossypium hirsutum HOM05D004406 ORTHO05D005660 3.7e-51 206.1 270 43.0
Gohir.A11G222401 Gossypium hirsutum HOM05D004406 ORTHO05D005660 1.4e-50 204.1 206 51.0
Rhsim06G0184400 Rhododendron simsii HOM05D004406 ORTHO05D005660 2.9e-48 196.4 207 51.7
SHI18054 Sapria himalayana HOM05D004406 ORTHO05D005660 6.8e-45 185.3 272 39.0
CSS0016238 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 2.8e-43 179.9 110 68.2
CSS0034904 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 1.4e-42 177.6 110 69.1
AL6G51100 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 3.2e-42 176.4 270 37.8
CSS0034423 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 3.2e-42 176.4 110 66.4
Lsat_1_v5_gn_7_99701 Lactuca sativa HOM05D004406 ORTHO05D005660 5.4e-42 175.6 272 40.8
SGA_v2.0_scaffold181G39778 Striga asiatica HOM05D004406 ORTHO05D005660 5.9e-41 172.2 167 52.1
AL6G51070 Arabidopsis lyrata HOM05D004406 ORTHO05D005660 8.0e-38 161.8 226 39.8
CSS0028761 Camellia sinensis var. sinensis HOM05D004406 ORTHO05D005660 9.2e-34 148.3 110 58.2
Zm00001eb049380 Zea mays HOM05D004406 ORTHO05D005660 1.0e-32 144.8 121 57.9
Gorai.006G005600 Gossypium raimondii HOM05D004406 ORTHO05D005660 1.3e-32 144.4 125 53.6
Cre12.g516550 Chlamydomonas reinhardtii HOM05D004406 ORTHO05D005660 1.4e-29 134.4 217 36.9
MCO08G055 Micromonas commoda HOM05D004406 ORTHO05D005660 6.4e-27 125.6 191 40.3
Haze_26719 Corylus avellana HOM05D004406 ORTHO05D005660 2.8e-22 110.2 135 40.0
Cfa025278 Carpinus fangiana HOM05D004406 ORTHO05D005660 5.8e-20 102.4 160 35.6
Zm00001eb005970 Zea mays HOM05D004406 ORTHO05D005660 2.2e-19 100.5 149 38.3
Gorai.007G217600 Gossypium raimondii HOM05D004406 ORTHO05D005660 3.7e-19 99.8 57 73.7
PRCOL_00002569 Prasinoderma coloniale HOM05D004406 ORTHO05D005660 1.1e-15 88.2 168 34.5
TPR.G22508 Trifolium pratense HOM05D004406 ORTHO05D005660 6.0e-09 65.9 66 48.5
Actinidia18838 Actinidia chinensis HOM05D004406 ORTHO05D005660 1.9e-07 60.8 49 61.2
Actinidia18840 Actinidia chinensis HOM05D004406 ORTHO05D005660 3.3e-07 60.1 51 56.9


User provided reference genes

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