Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33539 Sequoiadendron giganteum HOM05D000979 ORTHO05D384705 4.9e-147 524.6 300 100.0
SEGI_26487 Sequoiadendron giganteum HOM05D000979 ORTHO05D001811 4.7e-33 146.0 95 73.7
Nn3g20760 Nelumbo nucifera HOM05D000979 ORTHO05D001811 1.3e-22 111.3 92 57.6
AT1G30000 Arabidopsis thaliana HOM05D000979 ORTHO05D001811 2.2e-22 110.5 91 61.5
Lsat_1_v5_gn_7_27241 Lactuca sativa HOM05D000979 ORTHO05D001811 2.9e-22 110.2 92 58.7
TWI09G0023 Tripterygium wilfordii HOM05D000979 ORTHO05D001811 2.9e-22 110.2 94 57.4
Solyc02g070520.3 Solanum lycopersicum HOM05D000979 ORTHO05D001811 4.9e-22 109.4 91 59.3
Sopen02g019610 Solanum pennellii HOM05D000979 ORTHO05D001811 4.9e-22 109.4 91 59.3
AL1G43890 Arabidopsis lyrata HOM05D000979 ORTHO05D001811 6.4e-22 109.0 91 60.4
Carub.0001s2825 Capsella rubella HOM05D000979 ORTHO05D001811 6.4e-22 109.0 91 60.4
Potri.004G132300 Populus trichocarpa HOM05D000979 ORTHO05D001811 8.4e-22 108.6 92 58.7
GSVIVG01021446001 Vitis vinifera HOM05D000979 ORTHO05D001811 8.4e-22 108.6 92 56.5
ATR0044G024 Amborella trichopoda HOM05D000979 ORTHO05D001811 1.1e-21 108.2 90 56.7
BraA09t39173Z Brassica rapa HOM05D000979 ORTHO05D001811 1.1e-21 108.2 89 60.7
Cpa.g.sc166.13 Carica papaya HOM05D000979 ORTHO05D001811 1.1e-21 108.2 92 55.4
PSO541G5500 Papaver somniferum HOM05D000979 ORTHO05D001811 1.1e-21 108.2 92 57.6
PSO675G2638 Papaver somniferum HOM05D000979 ORTHO05D001811 1.1e-21 108.2 92 57.6
TAR627G0536 Trochodendron aralioides HOM05D000979 ORTHO05D001811 1.1e-21 108.2 92 56.5
Dinv32259 Davidia involucrata HOM05D000979 ORTHO05D001811 1.4e-21 107.8 88 56.8
ECA236G2602 Erigeron canadensis HOM05D000979 ORTHO05D001811 1.4e-21 107.8 92 58.7
Lj6g0003739 Lotus japonicus HOM05D000979 ORTHO05D001811 1.4e-21 107.8 92 56.5
Oeu042445.1 Olea europaea HOM05D000979 ORTHO05D001811 1.4e-21 107.8 91 57.1
BcaB03g12188 Brassica carinata HOM05D000979 ORTHO05D001811 1.9e-21 107.5 95 56.8
BraA08t34431Z Brassica rapa HOM05D000979 ORTHO05D001811 1.9e-21 107.5 95 57.9
CAN.G702.40 Capsicum annuum HOM05D000979 ORTHO05D001811 1.9e-21 107.5 91 59.3
Ca_00546_v3 Cicer arietinum L. HOM05D000979 ORTHO05D001811 1.9e-21 107.5 92 57.6
MBI07_g26355_MAGBIO Magnolia biondii HOM05D000979 ORTHO05D001811 1.9e-21 107.5 92 57.6
Ah.09g232600 Amaranthus hybridus HOM05D000979 ORTHO05D001811 2.4e-21 107.1 90 58.9
HanXRQChr04g0116441 Helianthus annuus HOM05D000979 ORTHO05D001811 2.4e-21 107.1 92 57.6
Hma1.2p1_0286F.1_g114050 Hydrangea macrophylla HOM05D000979 ORTHO05D001811 2.4e-21 107.1 88 56.8
A09p36520 Brassica napus HOM05D000979 ORTHO05D001811 3.2e-21 106.7 89 59.6
Dinv30740 Davidia involucrata HOM05D000979 ORTHO05D001811 3.2e-21 106.7 94 55.3
Thhalv10007084m.g Eutrema salsugineum HOM05D000979 ORTHO05D001811 3.2e-21 106.7 91 59.3
RcHm_v2.0_Chr5g0014001 Rosa chinensis HOM05D000979 ORTHO05D001811 3.2e-21 106.7 92 56.5
Sp1g25880 Schrenkiella parvula HOM05D000979 ORTHO05D001811 3.2e-21 106.7 92 57.6
BcaB07g32601 Brassica carinata HOM05D000979 ORTHO05D001811 4.2e-21 106.3 95 56.8
C03p76300 Brassica napus HOM05D000979 ORTHO05D001811 4.2e-21 106.3 95 56.8
BolC3t19886H Brassica oleracea HOM05D000979 ORTHO05D001811 4.2e-21 106.3 95 56.8
MD05G1284300 Malus domestica HOM05D000979 ORTHO05D001811 4.2e-21 106.3 92 57.6
Nitab4.5_0002275g0040 Nicotiana tabacum HOM05D000979 ORTHO05D001811 4.2e-21 106.3 91 57.1
Phvul.006G164400 Phaseolus vulgaris HOM05D000979 ORTHO05D001811 4.2e-21 106.3 94 56.4
Prupe.4G080100 Prunus persica HOM05D000979 ORTHO05D001811 4.2e-21 106.3 92 55.4
A08p24770 Brassica napus HOM05D000979 ORTHO05D001811 5.4e-21 105.9 95 56.8
QL05p058336 Quercus lobata HOM05D000979 ORTHO05D001811 5.4e-21 105.9 92 55.4
BcaC01g00148 Brassica carinata HOM05D000979 ORTHO05D001811 7.1e-21 105.5 95 56.8
CANSAT35G1475 Cannabis sativa HOM05D000979 ORTHO05D001811 7.1e-21 105.5 92 55.4
AUR62039779 Chenopodium quinoa HOM05D000979 ORTHO05D001811 7.1e-21 105.5 90 56.7
Manes.15G120800 Manihot esculenta HOM05D000979 ORTHO05D001811 7.1e-21 105.5 92 55.4
Medtr2g019520 Medicago truncatula HOM05D000979 ORTHO05D001811 7.1e-21 105.5 92 56.5
Sc05g0006230 Simmondsia chinensis HOM05D000979 ORTHO05D001811 7.1e-21 105.5 90 55.6
CiPaw.09G124200 Carya illinoinensis HOM05D000979 ORTHO05D001811 9.3e-21 105.1 92 55.4
AUR62030204 Chenopodium quinoa HOM05D000979 ORTHO05D001811 9.3e-21 105.1 90 56.7
Ciclev10014607m.g Citrus clementina HOM05D000979 ORTHO05D001811 9.3e-21 105.1 91 54.9
FAN11G1811 Fragaria x ananassa HOM05D000979 ORTHO05D001811 9.3e-21 105.1 92 55.4
FAN16G1772 Fragaria x ananassa HOM05D000979 ORTHO05D001811 9.3e-21 105.1 92 54.3
Manes.17G069200 Manihot esculenta HOM05D000979 ORTHO05D001811 9.3e-21 105.1 92 56.5
Psat1g190520 Pisum sativum HOM05D000979 ORTHO05D001811 9.3e-21 105.1 91 57.1
Actinidia39570 Actinidia chinensis HOM05D000979 ORTHO05D001811 1.2e-20 104.8 92 55.4
AagrBONN_evm.TU.Sc2ySwM_362.1616 Anthoceros agrestis HOM05D000979 ORTHO05D001811 1.2e-20 104.8 89 57.3
Aqoxy4G00015 Aquilegia oxysepala HOM05D000979 ORTHO05D001811 1.2e-20 104.8 92 56.5
Haze_05588 Corylus avellana HOM05D000979 ORTHO05D001811 1.2e-20 104.8 92 55.4
FAN21G1813 Fragaria x ananassa HOM05D000979 ORTHO05D001811 1.2e-20 104.8 92 55.4
Aa31LG6G5660 Aethionema arabicum HOM05D000979 ORTHO05D001811 1.6e-20 104.4 91 58.2
CARHR029390 Cardamine hirsuta HOM05D000979 ORTHO05D001811 1.6e-20 104.4 92 57.6
Nitab4.5_0005812g0010 Nicotiana tabacum HOM05D000979 ORTHO05D001811 1.6e-20 104.4 91 56.0
EL10Ac8g19694 Beta vulgaris HOM05D000979 ORTHO05D001811 2.1e-20 104.0 91 54.9
BcaC05g27011 Brassica carinata HOM05D000979 ORTHO05D001811 2.1e-20 104.0 89 58.4
C05p28760 Brassica napus HOM05D000979 ORTHO05D001811 2.1e-20 104.0 89 58.4
BolC5t31594H Brassica oleracea HOM05D000979 ORTHO05D001811 2.1e-20 104.0 89 58.4
Eucgr.D00298 Eucalyptus grandis HOM05D000979 ORTHO05D001811 2.1e-20 104.0 95 52.6
HanXRQChr15g0481961 Helianthus annuus HOM05D000979 ORTHO05D001811 2.1e-20 104.0 92 56.5
MD10G1262700 Malus domestica HOM05D000979 ORTHO05D001811 2.1e-20 104.0 92 55.4
TPR.G26655 Trifolium pratense HOM05D000979 ORTHO05D001811 2.7e-20 103.6 90 54.4
Actinidia07692 Actinidia chinensis HOM05D000979 ORTHO05D001811 3.5e-20 103.2 92 54.3
DCAR_007892 Daucus carota HOM05D000979 ORTHO05D001811 3.5e-20 103.2 88 56.8
Lalb_Chr15g0086861 Lupinus albus HOM05D000979 ORTHO05D001811 3.5e-20 103.2 92 56.5
Zm00001eb350710 Zea mays HOM05D000979 ORTHO05D001811 3.5e-20 103.2 92 53.3
Atru.chr10.1239 Acer truncatum HOM05D000979 ORTHO05D001811 4.6e-20 102.8 91 56.0
Lj2A306G66 Lonicera japonica HOM05D000979 ORTHO05D001811 4.6e-20 102.8 94 53.2
PGR083G0321 Punica granatum HOM05D000979 ORTHO05D001811 4.6e-20 102.8 95 53.7
Cc00_g08430 Coffea canephora HOM05D000979 ORTHO05D001811 6.0e-20 102.4 88 55.7
Glyma.13G217900 Glycine max HOM05D000979 ORTHO05D001811 6.0e-20 102.4 91 54.9
SalBow8G3442 Salvia bowleyana HOM05D000979 ORTHO05D001811 6.0e-20 102.4 91 56.0
CSS0007812 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D001811 7.8e-20 102.1 84 56.0
Glyma.15G094500 Glycine max HOM05D000979 ORTHO05D001811 7.8e-20 102.1 91 54.9
unitig_22.g5455 Utricularia gibba HOM05D000979 ORTHO05D001811 7.8e-20 102.1 91 53.8
Mapoly0010s0002 Marchantia polymorpha HOM05D000979 ORTHO05D001811 1.0e-19 101.7 91 56.0
Os05g0209100 Oryza sativa ssp. japonica HOM05D000979 ORTHO05D001811 1.0e-19 101.7 92 53.3
Thecc.06G151300 Theobroma cacao HOM05D000979 ORTHO05D001811 1.0e-19 101.7 92 53.3
VMungo0540G2252 Vigna mungo HOM05D000979 ORTHO05D001811 1.0e-19 101.7 91 57.1
MSTRG.7484 Avicennia marina HOM05D000979 ORTHO05D001811 1.7e-19 100.9 83 57.8
CSS0014095 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D001811 2.3e-19 100.5 86 53.5
CSS0023139 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D001811 2.3e-19 100.5 86 53.5
Gohir.D06G204500 Gossypium hirsutum HOM05D000979 ORTHO05D001811 2.3e-19 100.5 92 51.1
Gorai.010G238600 Gossypium raimondii HOM05D000979 ORTHO05D001811 2.3e-19 100.5 92 51.1
THA.LOC104812670 Tarenaya hassleriana HOM05D000979 ORTHO05D001811 2.3e-19 100.5 91 52.7
HPP92_021763 Vanilla planifolia HOM05D000979 ORTHO05D001811 2.3e-19 100.5 89 55.1
HPP92_026763 Vanilla planifolia HOM05D000979 ORTHO05D001811 2.3e-19 100.5 89 55.1
Gohir.A06G197000 Gossypium hirsutum HOM05D000979 ORTHO05D001811 3.0e-19 100.1 92 50.0
Gorai.009G155100 Gossypium raimondii HOM05D000979 ORTHO05D001811 3.0e-19 100.1 92 53.3
Sed0018569 Sechium edule HOM05D000979 ORTHO05D001811 3.0e-19 100.1 91 52.7
SGA_v2.0_scaffold1G00169 Striga asiatica HOM05D000979 ORTHO05D001811 3.0e-19 100.1 91 52.7
CDE11G0191 Ceratophyllum demersum HOM05D000979 ORTHO05D001811 3.9e-19 99.8 88 58.0
Duzib192G0962 Durio zibethinus HOM05D000979 ORTHO05D001811 3.9e-19 99.8 92 52.2
Pp3c10_9960 Physcomitrium patens HOM05D000979 ORTHO05D001811 3.9e-19 99.8 86 58.1
CBR_g3890 Chara braunii HOM05D000979 ORTHO05D001811 6.6e-19 99.0 85 56.5
Migut.M00912 Erythranthe guttata HOM05D000979 ORTHO05D001811 6.6e-19 99.0 90 52.2
CBR_g3902 Chara braunii HOM05D000979 ORTHO05D001811 8.7e-19 98.6 85 56.5
MELO3C007137.2 Cucumis melo HOM05D000979 ORTHO05D001811 8.7e-19 98.6 93 52.7
Duzib235G1132 Durio zibethinus HOM05D000979 ORTHO05D001811 8.7e-19 98.6 92 52.2
Gohir.D05G151000 Gossypium hirsutum HOM05D000979 ORTHO05D001811 8.7e-19 98.6 92 52.2
arahy.Tifrunner.gnm1.ann1.D6AVJJ Arachis hypogaea HOM05D000979 ORTHO05D001811 1.1e-18 98.2 92 52.2
CsaV3_6G051700 Cucumis sativus L. HOM05D000979 ORTHO05D001811 1.5e-18 97.8 93 52.7
Gohir.A05G148500 Gossypium hirsutum HOM05D000979 ORTHO05D001811 1.5e-18 97.8 92 52.2
Rhsim02G0157100 Rhododendron simsii HOM05D000979 ORTHO05D001811 1.5e-18 97.8 84 54.8
arahy.Tifrunner.gnm1.ann1.ZU426T Arachis hypogaea HOM05D000979 ORTHO05D001811 2.5e-18 97.1 92 51.1
Sed0015949 Sechium edule HOM05D000979 ORTHO05D001811 1.3e-17 94.7 90 51.1
SMO347G0612 Selaginella moellendorffii HOM05D000979 ORTHO05D001811 1.3e-17 94.7 95 51.6
ClCG01G024580 Citrullus lanatus HOM05D000979 ORTHO05D001811 1.6e-17 94.4 91 51.6
CSS0007681 Camellia sinensis var. sinensis HOM05D000979 ORTHO05D001811 2.4e-16 90.5 103 47.6
Psat7g199600 Pisum sativum HOM05D003697 ORTHO05D023078 2.7e-12 77.0 55 65.5
COL.COLO4_31078 Corchorus olitorius HOM05D000979 ORTHO05D001811 5.1e-11 72.8 108 40.7
FvH4_3g05640 Fragaria vesca HOM05D000979 ORTHO05D001811 3.3e-10 70.1 54 57.4
vmacro18409 Vaccinium macrocarpon HOM05D000979 ORTHO05D001811 2.8e-09 67.0 67 49.3
Psat5g201760 Pisum sativum HOM05D003697 ORTHO05D023078 3.8e-06 56.6 40 65.0


User provided reference genes

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