Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 0.0e+00 2234.9 1177 100.0
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 5.6e-271 938.3 1154 47.8
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 3.6e-270 935.6 1179 46.7
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 7.3e-263 911.4 1155 46.1
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 1.1e-261 907.5 1059 47.6
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 1.2e-257 894.0 1197 44.3
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 2.1e-257 893.3 1186 44.7
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 6.0e-257 891.7 1184 44.7
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 6.6e-256 888.3 1042 46.6
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 7.3e-255 884.8 1192 44.7
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 8.1e-254 881.3 1043 46.6
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.4e-253 879.8 1059 45.4
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 8.9e-253 877.9 1173 46.3
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 1.2e-252 877.5 1181 43.2
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 2.0e-252 876.7 1063 45.4
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 3.4e-252 875.9 1043 46.4
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 4.4e-252 875.5 1059 46.0
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 3.8e-251 872.5 1058 44.8
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 4.2e-250 869.0 1067 45.9
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 7.1e-250 868.2 1043 46.0
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 7.1e-250 868.2 1204 42.5
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 1.6e-249 867.1 1204 42.5
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 1.6e-249 867.1 1063 45.7
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 1.7e-248 863.6 1195 43.1
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 6.6e-248 861.7 1058 45.3
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 6.6e-248 861.7 1205 42.4
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.5e-247 860.5 1178 43.6
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 3.3e-247 859.4 1186 43.9
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.8e-246 856.3 1055 45.2
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 3.6e-246 855.9 1175 44.9
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.8e-245 853.6 1055 45.7
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 5.3e-245 852.0 1196 42.8
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 9.0e-245 851.3 1059 44.6
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 9.0e-245 851.3 1186 45.4
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.5e-244 850.5 1059 44.6
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 2.6e-244 849.7 1197 43.7
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 3.4e-244 849.4 1070 45.0
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 4.4e-244 849.0 1180 43.8
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 8.4e-243 844.7 1058 44.2
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 1.4e-242 844.0 1169 43.5
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 4.2e-242 842.4 1061 45.0
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 9.3e-242 841.3 1058 44.5
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 3.5e-241 839.3 1062 44.5
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 7.8e-241 838.2 1112 45.1
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 7.8e-241 838.2 1183 42.7
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 3.0e-240 836.3 1183 42.9
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 5.1e-240 835.5 1176 43.7
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 8.7e-240 834.7 1207 42.8
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 4.3e-239 832.4 1071 44.7
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 7.3e-239 831.6 1064 45.0
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 1.8e-237 827.0 1207 41.7
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 1.8e-237 827.0 1054 44.4
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 3.1e-237 826.2 1221 42.3
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 3.1e-237 826.2 1056 44.0
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 5.3e-237 825.5 1181 42.3
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 4.5e-236 822.4 1181 41.3
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 1.7e-235 820.5 1061 44.5
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 1.4e-234 817.4 1139 43.2
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 7.1e-234 815.1 1060 44.2
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 2.7e-233 813.1 1124 41.7
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 2.7e-233 813.1 1253 40.5
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 2.3e-232 810.1 1083 43.6
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 3.9e-232 809.3 1179 41.6
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 6.7e-232 808.5 1205 42.1
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 9.6e-231 804.7 1173 41.9
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 1.6e-230 803.9 1191 42.3
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.1e-229 801.2 1185 42.7
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 1.4e-229 800.8 1043 43.4
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 1.4e-229 800.8 1043 43.4
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 6.9e-229 798.5 1056 43.5
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 6.4e-227 792.0 1178 41.6
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 1.4e-226 790.8 971 46.4
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 1.9e-226 790.4 1206 40.1
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 2.5e-226 790.0 1171 41.3
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 3.2e-226 789.6 1203 42.7
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 7.9e-225 785.0 1199 40.4
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 1.5e-223 780.8 1026 42.6
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 2.5e-223 780.0 1002 42.9
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 8.4e-219 765.0 1173 40.0
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 3.2e-218 763.1 1022 42.8
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 1.6e-217 760.8 1357 38.0
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 1.6e-217 760.8 1050 42.3
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 1.1e-215 754.6 1176 41.0
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 3.7e-214 749.6 1155 40.6
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 1.8e-213 747.3 1075 41.5
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 9.1e-205 718.4 1024 41.5
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 7.9e-201 705.3 1539 32.3
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 2.0e-199 700.7 1142 38.6
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 4.1e-197 693.0 1059 39.0
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 6.3e-190 669.1 996 42.3
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 5.0e-187 659.4 1074 38.5
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.9e-186 657.5 1220 35.4
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 1.6e-180 637.9 1052 37.3
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 1.7e-179 634.4 1206 34.9
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 9.8e-167 592.0 743 45.1
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 4.9e-158 563.1 747 43.1
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 5.4e-157 559.7 825 42.1
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 1.1e-154 552.0 1230 32.0
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 3.0e-139 500.7 801 40.2
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.5e-138 498.4 641 43.7
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.5e-138 497.7 640 43.6
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 2.2e-134 484.6 656 42.4
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 2.4e-117 427.9 684 37.4
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 7.6e-111 406.4 492 45.9
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 5.3e-80 303.9 435 40.7
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 1.4e-64 252.7 396 41.7
Ah.14g085900 Amaranthus hybridus HOM05D006302 ORTHO05D007960 4.6e-31 141.4 183 44.8
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 1.9e-29 136.0 746 23.3
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 8.4e-25 120.6 193 36.8
Cpa.g.sc7.122 Carica papaya HOM05D006302 ORTHO05D007960 2.1e-15 89.4 121 43.8
CAN.G852.1 Capsicum annuum HOM05D006302 ORTHO05D007960 6.4e-09 67.8 75 45.3
Actinidia04194 Actinidia chinensis HOM05D006302 ORTHO05D007960 1.0e-06 60.5 71 47.9


User provided reference genes

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