Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
SEGI_32907 Sequoiadendron giganteum HOM05D007512 ORTHO05D009524 1.9e-110 402.5 199 100.0
Prupe.3G178900 Prunus persica HOM05D007512 ORTHO05D009524 2.9e-47 192.6 190 53.7
AagrBONN_evm.TU.Sc2ySwM_368.3309 Anthoceros agrestis HOM05D007512 ORTHO05D009524 3.8e-47 192.2 198 49.5
ATR0763G176 Amborella trichopoda HOM05D007512 ORTHO05D009524 1.4e-44 183.7 192 47.9
RcHm_v2.0_Chr2g0152451 Rosa chinensis HOM05D007512 ORTHO05D009524 3.0e-44 182.6 176 52.8
Glyma.02G283200 Glycine max HOM05D007512 ORTHO05D009524 4.0e-44 182.2 185 52.4
Cpa.g.sc53.33 Carica papaya HOM05D007512 ORTHO05D009524 5.7e-43 178.3 180 48.9
Haze_01852 Corylus avellana HOM05D007512 ORTHO05D009524 1.3e-42 177.2 184 51.1
Duzib147G0049 Durio zibethinus HOM05D007512 ORTHO05D009524 1.3e-42 177.2 179 52.5
FvH4_6g38852 Fragaria vesca HOM05D007512 ORTHO05D009524 1.3e-42 177.2 163 53.4
Gohir.D11G065833 Gossypium hirsutum HOM05D007512 ORTHO05D009524 1.7e-42 176.8 169 54.4
Gohir.A11G061700 Gossypium hirsutum HOM05D007512 ORTHO05D009524 2.2e-42 176.4 178 51.7
Gorai.007G071100 Gossypium raimondii HOM05D007512 ORTHO05D009524 2.2e-42 176.4 178 52.2
Migut.J01325 Erythranthe guttata HOM05D007512 ORTHO05D009524 2.8e-42 176.0 188 47.3
HPP92_026664 Vanilla planifolia HOM05D007512 ORTHO05D009524 2.8e-42 176.0 187 52.4
TPR.G8778 Trifolium pratense HOM05D007512 ORTHO05D009524 3.7e-42 175.6 175 48.0
Zm00001eb300410 Zea mays HOM05D007512 ORTHO05D009524 3.7e-42 175.6 183 48.6
CSS0030250 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 4.8e-42 175.3 161 56.5
HanXRQChr05g0157121 Helianthus annuus HOM05D007512 ORTHO05D009524 8.2e-42 174.5 168 55.4
CAN.G946.8 Capsicum annuum HOM05D007512 ORTHO05D009524 1.1e-41 174.1 181 48.1
LjContig00049g0018887 Lotus japonicus HOM05D007512 ORTHO05D009524 1.1e-41 174.1 159 52.8
Cfa005459 Carpinus fangiana HOM05D007512 ORTHO05D009524 1.8e-41 173.3 175 50.9
CiPaw.09G218400 Carya illinoinensis HOM05D007512 ORTHO05D009524 1.8e-41 173.3 185 50.3
COL.COLO4_29884 Corchorus olitorius HOM05D007512 ORTHO05D009524 1.8e-41 173.3 185 50.3
Os07g0160300 Oryza sativa ssp. japonica HOM05D007512 ORTHO05D009524 1.8e-41 173.3 184 50.5
Nn7g38060 Nelumbo nucifera HOM05D007512 ORTHO05D009524 2.4e-41 172.9 183 49.7
ClCG11G016580 Citrullus lanatus HOM05D007512 ORTHO05D009524 3.1e-41 172.6 176 48.3
MBI18_g45404_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 3.1e-41 172.6 183 47.5
Manes.12G132100 Manihot esculenta HOM05D007512 ORTHO05D009524 5.3e-41 171.8 182 51.1
Thecc.01G167000 Theobroma cacao HOM05D007512 ORTHO05D009524 9.1e-41 171.0 160 53.1
Nn7g38052 Nelumbo nucifera HOM05D007512 ORTHO05D009524 1.2e-40 170.6 184 50.0
Psat2g017680 Pisum sativum HOM05D007512 ORTHO05D009524 1.2e-40 170.6 175 49.7
Sabra02G0045700 Salix brachista HOM05D007512 ORTHO05D009524 2.0e-40 169.9 179 48.6
Gohir.D11G065600 Gossypium hirsutum HOM05D007512 ORTHO05D009524 3.5e-40 169.1 178 51.1
Eucgr.A02034 Eucalyptus grandis HOM05D007512 ORTHO05D009524 4.5e-40 168.7 161 54.0
Phvul.008G196000 Phaseolus vulgaris HOM05D007512 ORTHO05D009524 5.9e-40 168.3 175 48.6
Potri.002G056400 Populus trichocarpa HOM05D007512 ORTHO05D009524 5.9e-40 168.3 179 48.6
TWI14G0908 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 5.9e-40 168.3 169 51.5
Sed0022455 Sechium edule HOM05D007512 ORTHO05D009524 7.7e-40 167.9 176 46.0
SGA_v2.0_scaffold45G17047 Striga asiatica HOM05D007512 ORTHO05D009524 7.7e-40 167.9 170 50.0
TAR626G1484 Trochodendron aralioides HOM05D007512 ORTHO05D009524 7.7e-40 167.9 185 49.7
Ciclev10032522m.g Citrus clementina HOM05D007512 ORTHO05D009524 1.0e-39 167.5 205 44.4
Nitab4.5_0007814g0010 Nicotiana tabacum HOM05D007512 ORTHO05D009524 1.0e-39 167.5 178 47.8
ECA246G3016 Erigeron canadensis HOM05D007512 ORTHO05D009524 1.3e-39 167.2 183 49.2
PGSC0003DMG400045865 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.3e-39 167.2 183 47.5
PGSC0003DMG402000923 Solanum tuberosum HOM05D007512 ORTHO05D009524 1.3e-39 167.2 183 47.5
VMungo0647G1345 Vigna mungo HOM05D007512 ORTHO05D009524 1.3e-39 167.2 175 49.1
CsaV3_4G032050 Cucumis sativus L. HOM05D007512 ORTHO05D009524 1.7e-39 166.8 176 46.0
Mapoly0032s0087 Marchantia polymorpha HOM05D007512 ORTHO05D009524 1.7e-39 166.8 225 42.7
GSVIVG01020824001 Vitis vinifera HOM05D007512 ORTHO05D009524 1.7e-39 166.8 163 51.5
MELO3C022965.2 Cucumis melo HOM05D007512 ORTHO05D009524 2.9e-39 166.0 176 46.6
Rhsim12G0013200 Rhododendron simsii HOM05D007512 ORTHO05D009524 2.9e-39 166.0 166 51.2
Peaxi162Scf00359g00113 Petunia axillaris HOM05D007512 ORTHO05D009524 3.8e-39 165.6 184 46.7
Lj1C588G3 Lonicera japonica HOM05D007512 ORTHO05D009524 6.5e-39 164.9 167 53.3
Sc23g0003420 Simmondsia chinensis HOM05D007512 ORTHO05D009524 1.9e-38 163.3 178 47.2
arahy.Tifrunner.gnm1.ann1.EFEG4J Arachis hypogaea HOM05D007512 ORTHO05D009524 2.5e-38 162.9 193 42.5
QL08p045474 Quercus lobata HOM05D007512 ORTHO05D009524 2.5e-38 162.9 176 50.6
Nitab4.5_0001552g0120 Nicotiana tabacum HOM05D007512 ORTHO05D009524 3.2e-38 162.5 175 49.1
unitig_747.g21446 Utricularia gibba HOM05D007512 ORTHO05D009524 4.2e-38 162.2 161 44.7
Solyc07g044970.1 Solanum lycopersicum HOM05D007512 ORTHO05D009524 7.2e-38 161.4 183 45.4
MBI18_g43440_MAGBIO Magnolia biondii HOM05D007512 ORTHO05D009524 1.6e-37 160.2 154 50.6
Sopen07g023500 Solanum pennellii HOM05D007512 ORTHO05D009524 1.6e-37 160.2 183 45.9
Medtr5g090740 Medicago truncatula HOM05D007512 ORTHO05D009524 2.7e-37 159.5 176 44.9
AUR62004262 Chenopodium quinoa HOM05D007512 ORTHO05D009524 3.6e-37 159.1 178 46.6
Gohir.A11G061633 Gossypium hirsutum HOM05D007512 ORTHO05D009524 6.1e-37 158.3 178 47.8
Lalb_Chr11g0069491 Lupinus albus HOM05D007512 ORTHO05D009524 8.0e-37 157.9 160 48.8
Oeu021245.2 Olea europaea HOM05D007512 ORTHO05D009524 1.0e-36 157.5 182 45.1
Aqoxy1G01494 Aquilegia oxysepala HOM05D007512 ORTHO05D009524 1.4e-36 157.1 176 44.3
Ca_06252_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.2e-35 154.1 172 45.9
AUR62042750 Chenopodium quinoa HOM05D007512 ORTHO05D009524 2.0e-35 153.3 157 49.7
Dinv27197 Davidia involucrata HOM05D007512 ORTHO05D009524 4.4e-35 152.1 160 51.9
Ah.05g175540 Amaranthus hybridus HOM05D007512 ORTHO05D009524 9.8e-35 151.0 160 46.2
Pp3c3_10350 Physcomitrium patens HOM05D007512 ORTHO05D009524 1.7e-34 150.2 276 33.7
CAN.G358.11 Capsicum annuum HOM05D007512 ORTHO05D009524 6.3e-34 148.3 185 45.4
CSS0045166 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 1.4e-33 147.1 162 51.2
Pp3c26_9780 Physcomitrium patens HOM05D007512 ORTHO05D009524 5.4e-33 145.2 270 33.7
SMO367G0698 Selaginella moellendorffii HOM05D007512 ORTHO05D009524 1.3e-26 124.0 203 36.0
Lsat_1_v5_gn_5_21320 Lactuca sativa HOM05D007512 ORTHO05D009524 8.6e-23 111.3 163 39.9
Nitab4.5_0000241g0240 Nicotiana tabacum HOM05D007512 ORTHO05D009524 8.0e-21 104.8 183 37.2
Actinidia25705 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.5e-19 100.5 167 40.7
Actinidia18710 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.0e-19 100.1 192 33.3
Actinidia24468 Actinidia chinensis HOM05D007512 ORTHO05D009524 2.6e-19 99.8 162 39.5
CSS0013803 Camellia sinensis var. sinensis HOM05D007512 ORTHO05D009524 7.0e-17 91.7 188 30.9
PGR142G3775 Punica granatum HOM05D007512 ORTHO05D009524 2.0e-16 90.1 173 36.4
Actinidia25706 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.9e-16 88.6 175 35.4
Atru.chr6.2019 Acer truncatum HOM05D007512 ORTHO05D009524 1.7e-15 87.0 82 48.8
Actinidia40448 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.6e-13 80.5 176 30.7
Actinidia02493 Actinidia chinensis HOM05D007512 ORTHO05D009524 3.6e-13 79.3 177 31.1
Actinidia18709 Actinidia chinensis HOM05D007512 ORTHO05D009524 1.8e-12 77.0 169 32.5
Actinidia22804 Actinidia chinensis HOM05D007512 ORTHO05D009524 5.2e-12 75.5 174 31.6
Actinidia02491 Actinidia chinensis HOM05D007512 ORTHO05D009524 6.8e-12 75.1 172 30.8
Actinidia24467 Actinidia chinensis HOM05D007512 ORTHO05D009524 7.5e-11 71.6 117 35.9
TWI36G1125 Tripterygium wilfordii HOM05D007512 ORTHO05D009524 9.8e-11 71.2 165 28.5
FAN14G4311 Fragaria x ananassa HOM05D000876 ORTHO05D000285 2.7e-08 63.2 65 44.6
FvH4_6g38850 Fragaria vesca HOM05D000876 ORTHO05D000285 7.8e-08 61.6 55 47.3
Ca_06242_v3 Cicer arietinum L. HOM05D007512 ORTHO05D009524 1.3e-07 60.8 82 39.0


User provided reference genes

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